data_LDM # _chem_comp.id LDM _chem_comp.name "3-LAURYLAMIDO-N,N'-DIMETHYLPROPYLAMINOXYDE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H36 N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "[3-(DODECANOYLAMINO)PROPYL](HYDROXY)DIMETHYLAMMONIUM" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2003-07-21 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 300.480 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LDM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LDM N1 N1 N 1 1 N N N 3.038 27.720 9.633 -8.150 -0.218 -0.001 N1 LDM 1 LDM O1 O1 O -1 1 N N N 2.354 27.522 8.622 -8.148 -1.050 -1.205 O1 LDM 2 LDM C1 C1 C 0 1 N N N 3.766 26.480 10.130 -6.953 0.633 0.008 C1 LDM 3 LDM C3 C3 C 0 1 N N N 3.534 24.518 11.839 -4.454 0.639 0.008 C3 LDM 4 LDM C4 C4 C 0 1 N N N 3.088 22.556 13.211 -2.033 0.363 0.005 C4 LDM 5 LDM C5 C5 C 0 1 N N N 2.183 21.329 13.456 -0.801 -0.504 -0.005 C5 LDM 6 LDM C7 C7 C 0 1 N N N 1.483 20.372 15.711 1.698 -0.497 -0.005 C7 LDM 7 LDM C8 C8 C 0 1 N N N 1.947 19.559 16.998 2.945 0.389 0.005 C8 LDM 8 LDM C10 C10 C 0 1 N N N 2.586 19.939 19.433 5.443 0.395 0.004 C10 LDM 9 LDM C11 C11 C 0 1 N N N 1.567 20.405 20.485 6.695 -0.485 -0.005 C11 LDM 10 LDM C12 C12 C 0 1 N N N 1.898 19.817 21.854 7.942 0.401 0.004 C12 LDM 11 LDM CM1 CM1 C 0 1 N N N 4.030 28.720 9.277 -8.148 -1.079 1.189 CM1 LDM 12 LDM CM2 CM2 C 0 1 N N N 2.384 28.401 10.716 -9.352 0.627 0.009 CM2 LDM 13 LDM C2 C2 C 0 1 N N N 2.910 25.220 10.583 -5.701 -0.247 -0.001 C2 LDM 14 LDM C9 C9 C 0 1 N N N 2.138 20.597 18.111 4.196 -0.491 -0.005 C9 LDM 15 LDM N2 N2 N 0 1 N N N 2.754 23.335 12.166 -3.256 -0.204 -0.001 N2 LDM 16 LDM C14 C14 C 0 1 N N N 1.426 19.956 24.304 10.440 0.408 0.004 C14 LDM 17 LDM C15 C15 C 0 1 N N N 0.488 20.383 25.448 11.692 -0.473 -0.006 C15 LDM 18 LDM O2 O2 O 0 1 N N N 4.065 22.792 13.951 -1.925 1.571 0.018 O2 LDM 19 LDM C6 C6 C 0 1 N N N 2.597 20.551 14.719 0.446 0.383 0.005 C6 LDM 20 LDM C13 C13 C 0 1 N N N 0.841 20.305 22.932 9.193 -0.479 -0.006 C13 LDM 21 LDM H1C1 1H1C H 0 0 N N N 4.428 26.146 9.317 -6.954 1.253 0.905 H1C1 LDM 22 LDM H1C2 2H1C H 0 0 N N N 4.259 26.814 11.055 -6.954 1.272 -0.875 H1C2 LDM 23 LDM H3C1 1H3C H 0 0 N N N 4.571 24.225 11.619 -4.456 1.259 0.905 H3C1 LDM 24 LDM H3C2 2H3C H 0 0 N N N 3.525 25.213 12.692 -4.456 1.278 -0.875 H3C2 LDM 25 LDM H5C1 1H5C H 0 0 N N N 1.144 21.671 13.574 -0.799 -1.123 -0.902 H5C1 LDM 26 LDM H5C2 2H5C H 0 0 N N N 2.283 20.654 12.593 -0.799 -1.143 0.878 H5C2 LDM 27 LDM H7C1 1H7C H 0 0 N N N 1.128 21.364 16.028 1.699 -1.117 -0.902 H7C1 LDM 28 LDM H7C2 2H7C H 0 0 N N N 0.683 19.798 15.220 1.699 -1.136 0.878 H7C2 LDM 29 LDM H8C1 1H8C H 0 0 N N N 1.177 18.828 17.286 2.943 1.009 0.901 H8C1 LDM 30 LDM H8C2 2H8C H 0 0 N N N 2.875 18.999 16.807 2.943 1.028 -0.879 H8C2 LDM 31 LDM H101 1H10 H 0 0 N N N 2.572 18.843 19.342 5.442 1.015 0.901 H101 LDM 32 LDM H102 2H10 H 0 0 N N N 3.614 20.223 19.704 5.442 1.034 -0.879 H102 LDM 33 LDM H111 1H11 H 0 0 N N N 1.590 21.503 20.548 6.696 -1.105 -0.902 H111 LDM 34 LDM H112 2H11 H 0 0 N N N 0.566 20.061 20.185 6.696 -1.124 0.878 H112 LDM 35 LDM H121 1H12 H 0 0 N N N 1.874 18.719 21.793 7.940 1.021 0.901 H121 LDM 36 LDM H122 2H12 H 0 0 N N N 2.900 20.155 22.156 7.940 1.040 -0.879 H122 LDM 37 LDM HM11 1HM1 H 0 0 N N N 3.523 29.640 8.950 -8.149 -0.460 2.086 HM11 LDM 38 LDM HM12 2HM1 H 0 0 N N N 4.659 28.940 10.152 -9.036 -1.711 1.182 HM12 LDM 39 LDM HM13 3HM1 H 0 0 N N N 4.659 28.337 8.460 -7.256 -1.706 1.182 HM13 LDM 40 LDM HM21 1HM2 H 0 0 N N N 1.294 28.324 10.593 -9.353 1.266 -0.875 HM21 LDM 41 LDM HM22 2HM2 H 0 0 N N N 2.679 27.940 11.670 -10.240 -0.004 0.002 HM22 LDM 42 LDM HM23 3HM2 H 0 0 N N N 2.679 29.461 10.714 -9.353 1.247 0.905 HM23 LDM 43 LDM H2C1 1H2C H 0 0 N N N 1.890 25.551 10.829 -5.700 -0.867 -0.898 H2C1 LDM 44 LDM H2C2 2H2C H 0 0 N N N 2.899 24.496 9.755 -5.700 -0.886 0.882 H2C2 LDM 45 LDM H9C1 1H9C H 0 0 N N N 2.904 21.321 17.796 4.198 -1.111 -0.902 H9C1 LDM 46 LDM H9C2 2H9C H 0 0 N N N 1.173 21.095 18.285 4.198 -1.130 0.878 H9C2 LDM 47 LDM H2 H2 H 0 1 N N N 1.963 23.099 11.610 -3.343 -1.170 -0.012 H2 LDM 48 LDM H141 1H14 H 0 0 N N N 1.583 18.869 24.359 10.439 1.027 0.901 H141 LDM 49 LDM H142 2H14 H 0 0 N N N 2.376 20.497 24.420 10.439 1.047 -0.879 H142 LDM 50 LDM H151 1H15 H 0 0 N N N 0.082 19.489 25.943 12.580 0.159 0.001 H151 LDM 51 LDM H152 2H15 H 0 0 N N N 1.050 20.983 26.179 11.693 -1.112 0.877 H152 LDM 52 LDM H153 3H15 H 0 0 N N N -0.339 20.983 25.039 11.693 -1.092 -0.903 H153 LDM 53 LDM H6C1 1H6C H 0 0 N N N 2.953 19.556 14.413 0.445 1.002 0.902 H6C1 LDM 54 LDM H6C2 2H6C H 0 0 N N N 3.380 21.142 15.218 0.445 1.022 -0.878 H6C2 LDM 55 LDM H131 1H13 H 0 0 N N N 0.688 21.391 22.849 9.195 -1.098 -0.902 H131 LDM 56 LDM H132 2H13 H 0 0 N N N -0.134 19.820 22.781 9.195 -1.118 0.877 H132 LDM 57 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LDM N1 O1 SING N N 1 LDM N1 C1 SING N N 2 LDM N1 CM1 SING N N 3 LDM N1 CM2 SING N N 4 LDM C1 C2 SING N N 5 LDM C1 H1C1 SING N N 6 LDM C1 H1C2 SING N N 7 LDM C3 C2 SING N N 8 LDM C3 N2 SING N N 9 LDM C3 H3C1 SING N N 10 LDM C3 H3C2 SING N N 11 LDM C4 C5 SING N N 12 LDM C4 N2 SING N N 13 LDM C4 O2 DOUB N N 14 LDM C5 C6 SING N N 15 LDM C5 H5C1 SING N N 16 LDM C5 H5C2 SING N N 17 LDM C7 C8 SING N N 18 LDM C7 C6 SING N N 19 LDM C7 H7C1 SING N N 20 LDM C7 H7C2 SING N N 21 LDM C8 C9 SING N N 22 LDM C8 H8C1 SING N N 23 LDM C8 H8C2 SING N N 24 LDM C10 C11 SING N N 25 LDM C10 C9 SING N N 26 LDM C10 H101 SING N N 27 LDM C10 H102 SING N N 28 LDM C11 C12 SING N N 29 LDM C11 H111 SING N N 30 LDM C11 H112 SING N N 31 LDM C12 C13 SING N N 32 LDM C12 H121 SING N N 33 LDM C12 H122 SING N N 34 LDM CM1 HM11 SING N N 35 LDM CM1 HM12 SING N N 36 LDM CM1 HM13 SING N N 37 LDM CM2 HM21 SING N N 38 LDM CM2 HM22 SING N N 39 LDM CM2 HM23 SING N N 40 LDM C2 H2C1 SING N N 41 LDM C2 H2C2 SING N N 42 LDM C9 H9C1 SING N N 43 LDM C9 H9C2 SING N N 44 LDM N2 H2 SING N N 45 LDM C14 C15 SING N N 46 LDM C14 C13 SING N N 47 LDM C14 H141 SING N N 48 LDM C14 H142 SING N N 49 LDM C15 H151 SING N N 50 LDM C15 H152 SING N N 51 LDM C15 H153 SING N N 52 LDM C6 H6C1 SING N N 53 LDM C6 H6C2 SING N N 54 LDM C13 H131 SING N N 55 LDM C13 H132 SING N N 56 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LDM SMILES ACDLabs 10.04 "[O-][N+](C)(CCCNC(=O)CCCCCCCCCCC)C" LDM SMILES_CANONICAL CACTVS 3.341 "CCCCCCCCCCCC(=O)NCCC[N+](C)(C)[O-]" LDM SMILES CACTVS 3.341 "CCCCCCCCCCCC(=O)NCCC[N+](C)(C)[O-]" LDM SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CCCCCCCCCCCC(=O)NCCC[N+](C)(C)[O-]" LDM SMILES "OpenEye OEToolkits" 1.5.0 "CCCCCCCCCCCC(=O)NCCC[N+](C)(C)[O-]" LDM InChI InChI 1.03 "InChI=1S/C17H36N2O2/c1-4-5-6-7-8-9-10-11-12-14-17(20)18-15-13-16-19(2,3)21/h4-16H2,1-3H3,(H,18,20)" LDM InChIKey InChI 1.03 JNGWKQJZIUZUPR-UHFFFAOYSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier LDM "SYSTEMATIC NAME" ACDLabs 10.04 "N-[3-(dimethylnitroryl)propyl]dodecanamide" LDM "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "3-(dodecanoylamino)-N,N-dimethyl-propan-1-amine oxide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LDM "Create component" 2003-07-21 EBI LDM "Modify descriptor" 2011-06-04 RCSB LDM "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id LDM _pdbx_chem_comp_synonyms.name "[3-(DODECANOYLAMINO)PROPYL](HYDROXY)DIMETHYLAMMONIUM" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##