data_LII # _chem_comp.id LII _chem_comp.name "(Z)-6-(2-[2,5-DIMETHOXYPHENYL]ETHEN-1-YL)-2,4-DIAMINO-5-METHYLPYRIDO[2,3-D]PYRIMIDINE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H19 N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms SRI-9662 _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2002-01-07 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 337.376 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LII _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LII C4A C4A C 0 1 Y N N 13.724 24.170 32.260 -2.374 -0.675 -0.046 C4A LII 1 LII C4 C4 C 0 1 Y N N 15.075 24.278 31.725 -3.692 -0.661 0.475 C4 LII 2 LII C2 C2 C 0 1 Y N N 14.685 22.526 30.259 -4.119 1.234 -0.782 C2 LII 3 LII C8A C8A C 0 1 Y N N 12.881 23.308 31.575 -1.996 0.339 -0.962 C8A LII 4 LII C5 C5 C 0 1 Y N N 13.214 24.926 33.410 -1.447 -1.656 0.313 C5 LII 5 LII C6 C6 C 0 1 Y N N 11.845 24.930 33.542 -0.171 -1.584 -0.248 C6 LII 6 LII C7 C7 C 0 1 Y N N 10.997 23.966 32.773 0.128 -0.549 -1.149 C7 LII 7 LII C5A C5A C 0 1 N N N 13.968 25.411 34.619 -1.811 -2.754 1.279 C5A LII 8 LII C9 C9 C 0 1 N N N 11.106 25.843 34.497 0.851 -2.588 0.097 C9 LII 9 LII "C1'" "C1'" C 0 1 Y N N 9.689 24.129 35.818 2.476 -0.782 0.318 "C1'" LII 10 LII "C2'" "C2'" C 0 1 Y N N 10.553 23.083 36.172 3.667 -0.330 -0.265 "C2'" LII 11 LII "C3'" "C3'" C 0 1 Y N N 9.994 21.858 36.575 3.988 1.017 -0.221 "C3'" LII 12 LII "C4'" "C4'" C 0 1 Y N N 8.688 21.630 36.633 3.136 1.914 0.396 "C4'" LII 13 LII "C5'" "C5'" C 0 1 Y N N 7.745 22.721 36.261 1.953 1.473 0.976 "C5'" LII 14 LII "C6'" "C6'" C 0 1 Y N N 8.320 23.927 35.870 1.622 0.130 0.944 "C6'" LII 15 LII C10 C10 C 0 1 N N N 10.160 25.475 35.378 2.128 -2.213 0.276 C10 LII 16 LII C2X "C2A'" C 0 1 N N N 12.717 22.286 36.053 5.617 -0.454 -1.358 C2X LII 17 LII C5X "C5A'" C 0 1 N N N 5.555 23.421 36.065 1.731 3.649 1.455 C5X LII 18 LII N3 N3 N 0 1 Y N N 15.505 23.432 30.766 -4.514 0.301 0.080 N3 LII 19 LII N1 N1 N 0 1 Y N N 13.406 22.435 30.594 -2.904 1.267 -1.296 N1 LII 20 LII N8 N8 N 0 1 Y N N 11.542 23.230 31.817 -0.763 0.357 -1.472 N8 LII 21 LII N4 N4 N 0 1 N N N 15.958 25.154 32.096 -4.109 -1.624 1.367 N4 LII 22 LII N16 N16 N 0 1 N N N 15.139 21.667 29.390 -5.022 2.211 -1.156 N16 LII 23 LII "O2'" "O2'" O 0 1 N N N 11.884 23.461 36.064 4.506 -1.210 -0.871 "O2'" LII 24 LII "O5'" "O5'" O 0 1 N N N 6.478 22.503 36.319 1.122 2.362 1.580 "O5'" LII 25 LII H71 1H7 H 0 1 N N N 9.918 23.789 32.918 1.115 -0.498 -1.585 H71 LII 26 LII H51 1H5 H 0 1 N N N 14.820 26.010 34.221 -2.318 -3.557 0.742 H51 LII 27 LII H52 2H5 H 0 1 N N N 13.581 25.985 35.493 -0.906 -3.144 1.745 H52 LII 28 LII H53 3H5 H 0 1 N N N 14.459 24.507 35.049 -2.474 -2.357 2.048 H53 LII 29 LII H91 1H9 H 0 1 N N N 11.282 26.930 34.560 0.573 -3.626 0.205 H91 LII 30 LII "H3'1" "1H3'" H 0 0 N N N 10.631 21.007 36.869 4.906 1.367 -0.670 "H3'1" LII 31 LII "H4'1" "1H4'" H 0 0 N N N 8.409 20.616 36.964 3.391 2.963 0.427 "H4'1" LII 32 LII "H6'1" "1H6'" H 0 0 N N N 7.659 24.763 35.588 0.702 -0.211 1.396 "H6'1" LII 33 LII H101 1H10 H 0 0 N N N 9.714 26.394 35.793 2.900 -2.960 0.390 H101 LII 34 LII H2A1 1H2A H 0 0 N N N 12.418 21.565 35.257 5.263 0.294 -2.068 H2A1 LII 35 LII H2A2 2H2A H 0 0 N N N 13.786 22.590 35.966 6.113 0.042 -0.524 H2A2 LII 36 LII H2A3 3H2A H 0 0 N N N 12.535 21.632 36.938 6.321 -1.122 -1.855 H2A3 LII 37 LII "H5'1" "1H5'" H 0 0 N N N 5.771 23.830 35.050 1.855 3.891 0.400 "H5'1" LII 38 LII "H5'2" "2H5'" H 0 0 N N N 4.457 23.232 36.115 1.097 4.399 1.928 "H5'2" LII 39 LII "H5'3" "3H5'" H 0 0 N N N 5.768 24.291 36.729 2.706 3.638 1.943 "H5'3" LII 40 LII H41 1H4 H 0 1 N N N 16.050 25.066 33.108 -3.895 -2.557 1.210 H41 LII 41 LII H42 2H4 H 0 1 N N N 16.904 25.230 31.722 -4.617 -1.369 2.153 H42 LII 42 LII H161 1H16 H 0 0 N N N 15.944 21.188 29.795 -4.757 2.902 -1.783 H161 LII 43 LII H162 2H16 H 0 0 N N N 14.507 20.969 28.999 -5.920 2.207 -0.791 H162 LII 44 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LII C4A C4 DOUB Y N 1 LII C4A C8A SING Y N 2 LII C4A C5 SING Y N 3 LII C4 N3 SING Y N 4 LII C4 N4 SING N N 5 LII C2 N3 DOUB Y N 6 LII C2 N1 SING Y N 7 LII C2 N16 SING N N 8 LII C8A N1 DOUB Y N 9 LII C8A N8 SING Y N 10 LII C5 C6 DOUB Y N 11 LII C5 C5A SING N N 12 LII C6 C7 SING Y N 13 LII C6 C9 SING N N 14 LII C7 N8 DOUB Y N 15 LII C7 H71 SING N N 16 LII C5A H51 SING N N 17 LII C5A H52 SING N N 18 LII C5A H53 SING N N 19 LII C9 C10 DOUB N Z 20 LII C9 H91 SING N N 21 LII "C1'" "C2'" DOUB Y N 22 LII "C1'" "C6'" SING Y N 23 LII "C1'" C10 SING N N 24 LII "C2'" "C3'" SING Y N 25 LII "C2'" "O2'" SING N N 26 LII "C3'" "C4'" DOUB Y N 27 LII "C3'" "H3'1" SING N N 28 LII "C4'" "C5'" SING Y N 29 LII "C4'" "H4'1" SING N N 30 LII "C5'" "C6'" DOUB Y N 31 LII "C5'" "O5'" SING N N 32 LII "C6'" "H6'1" SING N N 33 LII C10 H101 SING N N 34 LII C2X "O2'" SING N N 35 LII C2X H2A1 SING N N 36 LII C2X H2A2 SING N N 37 LII C2X H2A3 SING N N 38 LII C5X "O5'" SING N N 39 LII C5X "H5'1" SING N N 40 LII C5X "H5'2" SING N N 41 LII C5X "H5'3" SING N N 42 LII N4 H41 SING N N 43 LII N4 H42 SING N N 44 LII N16 H161 SING N N 45 LII N16 H162 SING N N 46 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LII SMILES ACDLabs 10.04 "n1cc(c(c2c1nc(nc2N)N)C)/C=C\c3cc(OC)ccc3OC" LII SMILES_CANONICAL CACTVS 3.341 "COc1ccc(OC)c(\C=C/c2cnc3nc(N)nc(N)c3c2C)c1" LII SMILES CACTVS 3.341 "COc1ccc(OC)c(C=Cc2cnc3nc(N)nc(N)c3c2C)c1" LII SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "Cc1c(cnc2c1c(nc(n2)N)N)\C=C/c3cc(ccc3OC)OC" LII SMILES "OpenEye OEToolkits" 1.5.0 "Cc1c(cnc2c1c(nc(n2)N)N)C=Cc3cc(ccc3OC)OC" LII InChI InChI 1.03 "InChI=1S/C18H19N5O2/c1-10-12(9-21-17-15(10)16(19)22-18(20)23-17)5-4-11-8-13(24-2)6-7-14(11)25-3/h4-9H,1-3H3,(H4,19,20,21,22,23)/b5-4-" LII InChIKey InChI 1.03 WNDJHUNKXPAREB-PLNGDYQASA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier LII "SYSTEMATIC NAME" ACDLabs 10.04 "6-[(Z)-2-(2,5-dimethoxyphenyl)ethenyl]-5-methylpyrido[2,3-d]pyrimidine-2,4-diamine" LII "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "6-[(Z)-2-(2,5-dimethoxyphenyl)ethenyl]-5-methyl-pyrido[3,2-e]pyrimidine-2,4-diamine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LII "Create component" 2002-01-07 RCSB LII "Modify descriptor" 2011-06-04 RCSB LII "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id LII _pdbx_chem_comp_synonyms.name SRI-9662 _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##