data_LPC # _chem_comp.id LPC _chem_comp.name "[1-MYRISTOYL-GLYCEROL-3-YL]PHOSPHONYLCHOLINE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H47 N O7 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 468.585 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LPC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1BWO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LPC C0A C0A C 0 1 N N N 12.538 42.022 76.634 -10.854 0.268 -1.290 C0A LPC 1 LPC C0B C0B C 0 1 N N N 13.731 42.325 78.725 -12.082 1.378 0.446 C0B LPC 2 LPC C0C C0C C 0 1 N N N 11.639 43.500 78.363 -9.771 1.907 0.087 C0C LPC 3 LPC N1 N1 N 1 1 N N N 12.903 43.029 77.692 -10.773 0.833 0.064 N1 LPC 4 LPC C2 C2 C 0 1 N N N 13.675 44.158 77.134 -10.384 -0.219 1.012 C2 LPC 5 LPC C3 C3 C 0 1 N N N 13.037 44.907 75.951 -9.089 -0.881 0.537 C3 LPC 6 LPC O4 O4 O 0 1 N N N 14.002 45.850 75.463 -8.018 0.063 0.607 O4 LPC 7 LPC P5 P5 P 0 1 N N R 14.087 46.098 73.890 -6.694 -0.696 0.096 P5 LPC 8 LPC O5A O5A O 0 1 N N N 12.885 46.857 73.472 -6.863 -1.083 -1.458 O5A LPC 9 LPC O5B O5B O 0 1 N N N 14.366 44.803 73.233 -6.493 -1.928 0.891 O5B LPC 10 LPC O6 O6 O 0 1 N N N 15.382 47.039 73.710 -5.419 0.270 0.272 O6 LPC 11 LPC C7 C7 C 0 1 N N N 15.526 47.880 72.476 -4.267 -0.496 -0.085 C7 LPC 12 LPC C8 C8 C 0 1 N N R 15.274 47.175 71.209 -3.013 0.369 0.062 C8 LPC 13 LPC O8 O8 O 0 1 N N N 16.381 46.752 70.461 -3.061 1.441 -0.882 O8 LPC 14 LPC C9 C9 C 0 1 N N N 14.379 47.904 70.352 -1.771 -0.485 -0.200 C9 LPC 15 LPC OQ1 OQ1 O 0 1 N N N 11.938 47.911 68.962 0.737 -1.392 -0.471 OQ1 LPC 16 LPC OQ2 OQ2 O 0 1 N N N 13.854 47.013 69.276 -0.579 0.304 0.055 OQ2 LPC 17 LPC CA CA C 0 1 N N N 13.039 47.440 68.535 0.636 -0.243 -0.111 CA LPC 18 LPC CB CB C 0 1 N N N 13.223 47.458 67.098 1.873 0.576 0.153 CB LPC 19 LPC CC CC C 0 1 N N N 12.763 46.243 66.368 3.115 -0.278 -0.108 CC LPC 20 LPC CD CD C 0 1 N N N 12.197 46.533 65.011 4.371 0.554 0.160 CD LPC 21 LPC CE CE C 0 1 N N N 13.209 46.619 63.903 5.614 -0.300 -0.102 CE LPC 22 LPC CF CF C 0 1 N N N 12.605 46.590 62.532 6.870 0.531 0.166 CF LPC 23 LPC CG CG C 0 1 N N N 13.565 46.790 61.394 8.112 -0.323 -0.095 CG LPC 24 LPC CH CH C 0 1 N N N 12.949 46.755 60.024 9.368 0.509 0.173 CH LPC 25 LPC CI CI C 0 1 N N N 12.019 47.885 59.689 10.610 -0.345 -0.089 CI LPC 26 LPC CJ CJ C 0 1 N N N 11.756 48.076 58.230 11.866 0.486 0.179 CJ LPC 27 LPC CK CK C 0 1 N N N 10.455 48.727 57.900 13.109 -0.368 -0.082 CK LPC 28 LPC CL CL C 0 1 N N N 10.500 49.742 56.806 14.365 0.464 0.186 CL LPC 29 LPC CM CM C 0 1 N N N 9.452 50.804 56.900 15.607 -0.390 -0.076 CM LPC 30 LPC CN CN C 0 1 N N N 8.972 51.333 55.581 16.863 0.442 0.192 CN LPC 31 LPC H0A1 1H0A H 0 0 N N N 11.922 42.545 75.865 -11.597 -0.529 -1.307 H0A1 LPC 32 LPC H0A2 2H0A H 0 0 N N N 13.427 41.507 76.200 -11.142 1.049 -1.993 H0A2 LPC 33 LPC H0A3 3H0A H 0 0 N N N 12.034 41.118 77.050 -9.882 -0.136 -1.573 H0A3 LPC 34 LPC H0B1 1H0B H 0 0 N N N 14.001 43.070 79.508 -12.022 1.797 1.450 H0B1 LPC 35 LPC H0B2 2H0B H 0 0 N N N 13.227 41.421 79.141 -12.371 2.159 -0.257 H0B2 LPC 36 LPC H0B3 3H0B H 0 0 N N N 14.620 41.810 78.291 -12.826 0.581 0.429 H0B3 LPC 37 LPC H0C1 1H0C H 0 0 N N N 11.909 44.245 79.146 -8.850 1.556 -0.380 H0C1 LPC 38 LPC H0C2 2H0C H 0 0 N N N 10.891 43.895 77.636 -10.149 2.770 -0.462 H0C2 LPC 39 LPC H0C3 3H0C H 0 0 N N N 11.030 42.657 78.766 -9.568 2.194 1.119 H0C3 LPC 40 LPC H21 1H2 H 0 1 N N N 13.923 44.880 77.946 -11.175 -0.967 1.068 H21 LPC 41 LPC H22 2H2 H 0 1 N N N 14.696 43.811 76.851 -10.228 0.219 1.997 H22 LPC 42 LPC H31 1H3 H 0 1 N N N 12.659 44.221 75.156 -9.209 -1.217 -0.493 H31 LPC 43 LPC H32 2H3 H 0 1 N N N 12.061 45.380 76.212 -8.862 -1.736 1.174 H32 LPC 44 LPC HO5A AHO5 H 0 0 N N N 12.935 47.004 72.534 -6.992 -0.254 -1.940 HO5A LPC 45 LPC H71 1H7 H 0 1 N N N 14.877 48.784 72.548 -4.359 -0.830 -1.118 H71 LPC 46 LPC H72 2H7 H 0 1 N N N 16.531 48.362 72.454 -4.189 -1.363 0.572 H72 LPC 47 LPC H8 H8 H 0 1 N N N 14.807 46.232 71.579 -2.969 0.776 1.072 H8 LPC 48 LPC HO8 HO8 H 0 1 N N N 16.218 46.296 69.643 -3.100 1.039 -1.760 HO8 LPC 49 LPC H91 1H9 H 0 1 N N N 13.557 48.391 70.926 -1.771 -0.819 -1.237 H91 LPC 50 LPC H92 2H9 H 0 1 N N N 14.856 48.822 69.936 -1.780 -1.352 0.461 H92 LPC 51 LPC HB1 1HB H 0 1 N N N 12.740 48.365 66.665 1.873 0.910 1.191 HB1 LPC 52 LPC HB2 2HB H 0 1 N N N 14.291 47.664 66.855 1.882 1.443 -0.507 HB2 LPC 53 LPC HC1 1HC H 0 1 N N N 13.583 45.491 66.299 3.115 -0.611 -1.146 HC1 LPC 54 LPC HC2 2HC H 0 1 N N N 12.033 45.667 66.983 3.106 -1.145 0.552 HC2 LPC 55 LPC HD1 1HD H 0 1 N N N 11.409 45.785 64.755 4.372 0.888 1.197 HD1 LPC 56 LPC HD2 2HD H 0 1 N N N 11.581 47.462 65.042 4.381 1.421 -0.501 HD2 LPC 57 LPC HE1 1HE H 0 1 N N N 13.855 47.518 64.029 5.613 -0.634 -1.139 HE1 LPC 58 LPC HE2 2HE H 0 1 N N N 13.979 45.819 64.010 5.604 -1.167 0.559 HE2 LPC 59 LPC HF1 1HF H 0 1 N N N 12.035 45.642 62.387 6.870 0.865 1.204 HF1 LPC 60 LPC HF2 2HF H 0 1 N N N 11.775 47.332 62.465 6.879 1.398 -0.494 HF2 LPC 61 LPC HG1 1HG H 0 1 N N N 14.134 47.738 61.534 8.112 -0.656 -1.133 HG1 LPC 62 LPC HG2 2HG H 0 1 N N N 14.397 46.050 61.459 8.102 -1.190 0.565 HG2 LPC 63 LPC HH1 1HH H 0 1 N N N 13.749 46.683 59.251 9.368 0.843 1.210 HH1 LPC 64 LPC HH2 2HH H 0 1 N N N 12.430 45.780 59.867 9.378 1.376 -0.488 HH2 LPC 65 LPC HI1 1HI H 0 1 N N N 11.057 47.768 60.241 10.610 -0.679 -1.126 HI1 LPC 66 LPC HI2 2HI H 0 1 N N N 12.389 48.834 60.140 10.601 -1.212 0.572 HI2 LPC 67 LPC HJ1 1HJ H 0 1 N N N 12.596 48.637 57.758 11.867 0.820 1.217 HJ1 LPC 68 LPC HJ2 2HJ H 0 1 N N N 11.845 47.102 57.693 11.876 1.353 -0.481 HJ2 LPC 69 LPC HK1 1HK H 0 1 N N N 9.688 47.950 57.668 13.108 -0.701 -1.120 HK1 LPC 70 LPC HK2 2HK H 0 1 N N N 10.010 49.176 58.818 13.099 -1.235 0.578 HK2 LPC 71 LPC HL1 1HL H 0 1 N N N 11.513 50.202 56.745 14.365 0.798 1.223 HL1 LPC 72 LPC HL2 2HL H 0 1 N N N 10.456 49.241 55.810 14.374 1.331 -0.475 HL2 LPC 73 LPC HM1 1HM H 0 1 N N N 8.589 50.443 57.508 15.607 -0.724 -1.113 HM1 LPC 74 LPC HM2 2HM H 0 1 N N N 9.807 51.640 57.545 15.598 -1.257 0.585 HM2 LPC 75 LPC HN1 1HN H 0 1 N N N 8.190 52.125 55.651 16.873 1.309 -0.468 HN1 LPC 76 LPC HN2 2HN H 0 1 N N N 9.834 51.693 54.972 16.863 0.775 1.230 HN2 LPC 77 LPC HN3 3HN H 0 1 N N N 8.616 50.496 54.935 17.748 -0.167 0.006 HN3 LPC 78 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LPC C0A N1 SING N N 1 LPC C0A H0A1 SING N N 2 LPC C0A H0A2 SING N N 3 LPC C0A H0A3 SING N N 4 LPC C0B N1 SING N N 5 LPC C0B H0B1 SING N N 6 LPC C0B H0B2 SING N N 7 LPC C0B H0B3 SING N N 8 LPC C0C N1 SING N N 9 LPC C0C H0C1 SING N N 10 LPC C0C H0C2 SING N N 11 LPC C0C H0C3 SING N N 12 LPC N1 C2 SING N N 13 LPC C2 C3 SING N N 14 LPC C2 H21 SING N N 15 LPC C2 H22 SING N N 16 LPC C3 O4 SING N N 17 LPC C3 H31 SING N N 18 LPC C3 H32 SING N N 19 LPC O4 P5 SING N N 20 LPC P5 O5A SING N N 21 LPC P5 O5B DOUB N N 22 LPC P5 O6 SING N N 23 LPC O5A HO5A SING N N 24 LPC O6 C7 SING N N 25 LPC C7 C8 SING N N 26 LPC C7 H71 SING N N 27 LPC C7 H72 SING N N 28 LPC C8 O8 SING N N 29 LPC C8 C9 SING N N 30 LPC C8 H8 SING N N 31 LPC O8 HO8 SING N N 32 LPC C9 OQ2 SING N N 33 LPC C9 H91 SING N N 34 LPC C9 H92 SING N N 35 LPC OQ1 CA DOUB N N 36 LPC OQ2 CA SING N N 37 LPC CA CB SING N N 38 LPC CB CC SING N N 39 LPC CB HB1 SING N N 40 LPC CB HB2 SING N N 41 LPC CC CD SING N N 42 LPC CC HC1 SING N N 43 LPC CC HC2 SING N N 44 LPC CD CE SING N N 45 LPC CD HD1 SING N N 46 LPC CD HD2 SING N N 47 LPC CE CF SING N N 48 LPC CE HE1 SING N N 49 LPC CE HE2 SING N N 50 LPC CF CG SING N N 51 LPC CF HF1 SING N N 52 LPC CF HF2 SING N N 53 LPC CG CH SING N N 54 LPC CG HG1 SING N N 55 LPC CG HG2 SING N N 56 LPC CH CI SING N N 57 LPC CH HH1 SING N N 58 LPC CH HH2 SING N N 59 LPC CI CJ SING N N 60 LPC CI HI1 SING N N 61 LPC CI HI2 SING N N 62 LPC CJ CK SING N N 63 LPC CJ HJ1 SING N N 64 LPC CJ HJ2 SING N N 65 LPC CK CL SING N N 66 LPC CK HK1 SING N N 67 LPC CK HK2 SING N N 68 LPC CL CM SING N N 69 LPC CL HL1 SING N N 70 LPC CL HL2 SING N N 71 LPC CM CN SING N N 72 LPC CM HM1 SING N N 73 LPC CM HM2 SING N N 74 LPC CN HN1 SING N N 75 LPC CN HN2 SING N N 76 LPC CN HN3 SING N N 77 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LPC SMILES ACDLabs 10.04 "O=C(OCC(O)COP(=O)(OCC[N+](C)(C)C)O)CCCCCCCCCCCCC" LPC SMILES_CANONICAL CACTVS 3.341 "CCCCCCCCCCCCCC(=O)OC[C@@H](O)CO[P@@](O)(=O)OCC[N+](C)(C)C" LPC SMILES CACTVS 3.341 "CCCCCCCCCCCCCC(=O)OC[CH](O)CO[P](O)(=O)OCC[N+](C)(C)C" LPC SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CCCCCCCCCCCCCC(=O)OC[C@H](CO[P@](=O)(O)OCC[N+](C)(C)C)O" LPC SMILES "OpenEye OEToolkits" 1.5.0 "CCCCCCCCCCCCCC(=O)OCC(COP(=O)(O)OCC[N+](C)(C)C)O" LPC InChI InChI 1.03 "InChI=1S/C22H46NO7P/c1-5-6-7-8-9-10-11-12-13-14-15-16-22(25)28-19-21(24)20-30-31(26,27)29-18-17-23(2,3)4/h21,24H,5-20H2,1-4H3/p+1/t21-/m1/s1" LPC InChIKey InChI 1.03 VXUOFDJKYGDUJI-OAQYLSRUSA-O # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier LPC "SYSTEMATIC NAME" ACDLabs 10.04 "(4R,7R)-4,7-dihydroxy-N,N,N-trimethyl-10-oxo-3,5,9-trioxa-4-phosphatricosan-1-aminium 4-oxide" LPC "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-[hydroxy-[(2R)-2-hydroxy-3-tetradecanoyloxy-propoxy]phosphoryl]oxyethyl-trimethyl-azanium" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LPC "Create component" 1999-07-08 RCSB LPC "Modify descriptor" 2011-06-04 RCSB #