data_LTX # _chem_comp.id LTX _chem_comp.name ;(5~{S},6~{R},7~{E},9~{E},11~{Z},14~{Z})-6-[(2~{R})-2-[[(4~{S})-4-azanyl-5-oxidanyl-5-oxidanylidene-pentanoyl]amino]-3-( 2-hydroxy-2-oxoethylamino)-3-oxidanylidene-propyl]sulfanyl-5-oxidanyl-icosa-7,9,11,14-tetraenoic acid ; _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C30 H47 N3 O9 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "Leukotriene C4" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-01-04 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 625.774 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LTX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5H9N _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LTX O2 O1 O 0 1 N N N 0.610 6.763 -7.958 -4.324 7.929 -2.862 O2 LTX 1 LTX C1 C1 C 0 1 N N N 1.514 7.225 -8.693 -3.616 7.382 -1.861 C1 LTX 2 LTX O1 O2 O 0 1 N N N 1.346 7.441 -9.918 -3.471 7.985 -0.824 O1 LTX 3 LTX C2 C2 C 0 1 N N N 2.852 7.549 -8.071 -3.003 6.016 -2.030 C2 LTX 4 LTX C3 C3 C 0 1 N N N 3.878 6.507 -8.504 -2.257 5.629 -0.752 C3 LTX 5 LTX C4 C4 C 0 1 N N N 3.298 5.099 -8.385 -1.634 4.242 -0.924 C4 LTX 6 LTX C5 C5 C 0 1 N N S 4.388 4.049 -8.552 -0.888 3.856 0.355 C5 LTX 7 LTX O3 O3 O 0 1 N N N 4.830 3.997 -9.916 0.186 4.773 0.575 O3 LTX 8 LTX C6 C6 C 0 1 N N R 3.914 2.665 -8.119 -0.328 2.440 0.211 C6 LTX 9 LTX C7 C7 C 0 1 N N N 2.777 2.167 -9.002 0.422 2.066 1.463 C7 LTX 10 LTX C8 C8 C 0 1 N N N 1.535 1.958 -8.533 1.717 1.757 1.398 C8 LTX 11 LTX C9 C9 C 0 1 N N N 0.480 1.455 -9.427 2.446 1.393 2.615 C9 LTX 12 LTX C10 C10 C 0 1 N N N -0.710 1.004 -9.005 3.756 1.081 2.549 C10 LTX 13 LTX C11 C11 C 0 1 N N N -1.694 0.507 -9.972 4.485 0.717 3.766 C11 LTX 14 LTX C12 C12 C 0 1 N N N -2.927 0.055 -9.709 5.756 0.323 3.689 C12 LTX 15 LTX C13 C13 C 0 1 N N N -3.555 -0.032 -8.329 6.485 0.383 2.372 C13 LTX 16 LTX C14 C14 C 0 1 N N N -4.082 1.312 -7.867 7.756 1.177 2.537 C14 LTX 17 LTX C15 C15 C 0 1 N N N -5.208 1.858 -8.312 8.902 0.665 2.163 C15 LTX 18 LTX C16 C16 C 0 1 N N N -6.093 1.174 -9.327 8.935 -0.647 1.422 C16 LTX 19 LTX C17 C17 C 0 1 N N N -6.730 2.213 -10.245 9.736 -0.483 0.129 C17 LTX 20 LTX C18 C18 C 0 1 N N N -7.781 1.548 -11.125 9.769 -1.815 -0.623 C18 LTX 21 LTX C19 C19 C 0 1 N N N -8.234 2.455 -12.259 10.570 -1.651 -1.916 C19 LTX 22 LTX C20 C20 C 0 1 N N N -9.305 1.780 -13.094 10.603 -2.984 -2.668 C20 LTX 23 LTX O32 O4 O 0 1 N N N 3.899 -1.200 -13.326 1.526 -2.746 -3.940 O32 LTX 24 LTX C21 C21 C 0 1 N N N 4.075 -0.833 -12.149 1.426 -3.822 -3.400 C21 LTX 25 LTX O31 O5 O 0 1 N N N 3.740 0.291 -11.721 2.176 -4.855 -3.819 O31 LTX 26 LTX CA3 C22 C 0 1 N N N 4.731 -1.799 -11.198 0.461 -4.006 -2.258 CA3 LTX 27 LTX N3 N1 N 0 1 N N N 4.810 -1.220 -9.866 -0.231 -2.742 -1.995 N3 LTX 28 LTX C22 C23 C 0 1 N N N 5.580 -1.707 -8.898 -1.148 -2.668 -1.010 C22 LTX 29 LTX O33 O6 O 0 1 N N N 6.284 -2.685 -9.080 -1.400 -3.648 -0.341 O33 LTX 30 LTX CA2 C24 C 0 1 N N R 5.583 -1.041 -7.550 -1.860 -1.368 -0.740 CA2 LTX 31 LTX CB2 C25 C 0 1 N N N 4.628 0.150 -7.475 -0.836 -0.292 -0.373 CB2 LTX 32 LTX SG2 S1 S 0 1 N N N 5.331 1.597 -8.193 -1.693 1.273 -0.048 SG2 LTX 33 LTX N2 N2 N 0 1 N N N 6.931 -0.676 -7.169 -2.799 -1.546 0.370 N2 LTX 34 LTX CD1 C26 C 0 1 N N N 7.427 -0.992 -5.981 -4.036 -2.026 0.136 CD1 LTX 35 LTX OE1 O7 O 0 1 N N N 6.728 -1.263 -5.015 -4.373 -2.310 -0.994 OE1 LTX 36 LTX CG1 C27 C 0 1 N N N 8.936 -0.979 -5.911 -5.002 -2.210 1.278 CG1 LTX 37 LTX CB1 C28 C 0 1 N N N 9.426 -1.023 -4.472 -6.325 -2.763 0.743 CB1 LTX 38 LTX CA1 C29 C 0 1 N N S 10.860 -0.504 -4.402 -7.305 -2.950 1.903 CA1 LTX 39 LTX N1 N3 N 0 1 N N N 10.951 0.786 -5.116 -6.793 -3.981 2.816 N1 LTX 40 LTX C23 C30 C 0 1 N N N 11.809 -1.480 -5.029 -8.646 -3.378 1.363 C23 LTX 41 LTX O11 O8 O 0 1 N N N 12.544 -1.081 -5.960 -8.967 -4.542 1.396 O11 LTX 42 LTX O12 O9 O 0 1 N N N 11.834 -2.650 -4.592 -9.483 -2.465 0.846 O12 LTX 43 LTX H1 H1 H 0 1 N N N -0.175 6.618 -8.474 -4.697 8.807 -2.706 H1 LTX 44 LTX H2 H2 H 0 1 N N N 3.179 8.546 -8.402 -3.789 5.286 -2.226 H2 LTX 45 LTX H3 H3 H 0 1 N N N 2.759 7.539 -6.975 -2.306 6.031 -2.867 H3 LTX 46 LTX H4 H4 H 0 1 N N N 4.767 6.587 -7.862 -1.470 6.359 -0.556 H4 LTX 47 LTX H5 H5 H 0 1 N N N 4.163 6.693 -9.550 -2.954 5.614 0.086 H5 LTX 48 LTX H6 H6 H 0 1 N N N 2.536 4.956 -9.166 -2.421 3.513 -1.119 H6 LTX 49 LTX H7 H7 H 0 1 N N N 2.834 4.983 -7.394 -0.937 4.258 -1.761 H7 LTX 50 LTX H8 H8 H 0 1 N N N 5.234 4.333 -7.910 -1.574 3.891 1.201 H8 LTX 51 LTX H9 H9 H 0 1 N N N 5.509 3.338 -10.004 0.837 4.795 -0.140 H9 LTX 52 LTX H10 H10 H 0 1 N N N 3.588 2.693 -7.069 0.349 2.402 -0.643 H10 LTX 53 LTX H11 H11 H 0 1 N N N 2.977 1.974 -10.046 -0.090 2.048 2.414 H11 LTX 54 LTX H12 H12 H 0 1 N N N 1.310 2.160 -7.496 2.229 1.774 0.447 H12 LTX 55 LTX H13 H13 H 0 1 N N N 0.676 1.449 -10.489 1.934 1.376 3.566 H13 LTX 56 LTX H14 H14 H 0 1 N N N -0.944 1.007 -7.951 4.268 1.098 1.598 H14 LTX 57 LTX H15 H15 H 0 1 N N N -1.392 0.505 -11.009 3.993 0.769 4.726 H15 LTX 58 LTX H16 H16 H 0 1 N N N -3.523 -0.275 -10.547 6.263 -0.040 4.571 H16 LTX 59 LTX H17 H17 H 0 1 N N N -4.388 -0.750 -8.361 6.729 -0.628 2.045 H17 LTX 60 LTX H18 H18 H 0 1 N N N -2.796 -0.382 -7.614 5.851 0.863 1.627 H18 LTX 61 LTX H19 H19 H 0 1 N N N -3.508 1.858 -7.133 7.721 2.168 2.964 H19 LTX 62 LTX H20 H20 H 0 1 N N N -5.501 2.826 -7.934 9.823 1.183 2.385 H20 LTX 63 LTX H21 H21 H 0 1 N N N -6.884 0.616 -8.804 9.406 -1.406 2.047 H21 LTX 64 LTX H22 H22 H 0 1 N N N -5.489 0.478 -9.928 7.917 -0.955 1.182 H22 LTX 65 LTX H23 H23 H 0 1 N N N -5.954 2.664 -10.881 9.265 0.275 -0.496 H23 LTX 66 LTX H24 H24 H 0 1 N N N -7.206 2.996 -9.636 10.753 -0.176 0.369 H24 LTX 67 LTX H25 H25 H 0 1 N N N -8.653 1.293 -10.505 10.240 -2.574 0.002 H25 LTX 68 LTX H26 H26 H 0 1 N N N -7.355 0.629 -11.554 8.751 -2.123 -0.863 H26 LTX 69 LTX H27 H27 H 0 1 N N N -7.371 2.689 -12.900 10.099 -0.893 -2.541 H27 LTX 70 LTX H28 H28 H 0 1 N N N -8.640 3.386 -11.836 11.588 -1.344 -1.676 H28 LTX 71 LTX H29 H29 H 0 1 N N N -9.616 2.453 -13.906 9.585 -3.291 -2.908 H29 LTX 72 LTX H30 H30 H 0 1 N N N -8.904 0.850 -13.523 11.174 -2.867 -3.589 H30 LTX 73 LTX H31 H31 H 0 1 N N N -10.172 1.547 -12.459 11.074 -3.742 -2.042 H31 LTX 74 LTX H32 H32 H 0 1 N N N 3.344 0.793 -12.424 2.781 -4.688 -4.554 H32 LTX 75 LTX H33 H33 H 0 1 N N N 4.140 -2.726 -11.157 -0.269 -4.773 -2.519 H33 LTX 76 LTX H34 H34 H 0 1 N N N 5.746 -2.027 -11.555 1.007 -4.314 -1.366 H34 LTX 77 LTX H35 H35 H 0 1 N N N 4.255 -0.412 -9.668 -0.030 -1.959 -2.530 H35 LTX 78 LTX H36 H36 H 0 1 N N N 5.220 -1.783 -6.824 -2.406 -1.060 -1.632 H36 LTX 79 LTX H37 H37 H 0 1 N N N 4.394 0.353 -6.420 -0.289 -0.599 0.518 H37 LTX 80 LTX H38 H38 H 0 1 N N N 3.702 -0.101 -8.014 -0.137 -0.159 -1.199 H38 LTX 81 LTX H39 H39 H 0 1 N N N 7.502 -0.173 -7.818 -2.530 -1.320 1.274 H39 LTX 82 LTX H40 H40 H 0 1 N N N 9.327 -1.855 -6.449 -4.582 -2.909 2.000 H40 LTX 83 LTX H41 H41 H 0 1 N N N 9.308 -0.060 -6.388 -5.180 -1.250 1.762 H41 LTX 84 LTX H42 H42 H 0 1 N N N 8.778 -0.393 -3.845 -6.746 -2.064 0.021 H42 LTX 85 LTX H43 H43 H 0 1 N N N 9.394 -2.060 -4.106 -6.148 -3.724 0.259 H43 LTX 86 LTX H44 H44 H 0 1 N N N 11.134 -0.360 -3.347 -7.414 -2.009 2.442 H44 LTX 87 LTX H45 H45 H 0 1 N N N 10.320 1.442 -4.702 -6.684 -4.864 2.339 H45 LTX 88 LTX H46 H46 H 0 1 N N N 11.885 1.137 -5.052 -5.926 -3.689 3.241 H46 LTX 89 LTX H48 H48 H 0 1 N N N 12.480 -3.154 -5.072 -10.332 -2.787 0.512 H48 LTX 90 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LTX O32 C21 DOUB N N 1 LTX C20 C19 SING N N 2 LTX C19 C18 SING N N 3 LTX C21 O31 SING N N 4 LTX C21 CA3 SING N N 5 LTX CA3 N3 SING N N 6 LTX C18 C17 SING N N 7 LTX C17 C16 SING N N 8 LTX C11 C12 DOUB N Z 9 LTX C11 C10 SING N N 10 LTX O1 C1 DOUB N N 11 LTX O3 C5 SING N N 12 LTX N3 C22 SING N N 13 LTX C12 C13 SING N N 14 LTX C9 C10 DOUB N E 15 LTX C9 C8 SING N N 16 LTX C16 C15 SING N N 17 LTX O33 C22 DOUB N N 18 LTX C7 C8 DOUB N E 19 LTX C7 C6 SING N N 20 LTX C22 CA2 SING N N 21 LTX C1 C2 SING N N 22 LTX C1 O2 SING N N 23 LTX C5 C4 SING N N 24 LTX C5 C6 SING N N 25 LTX C3 C4 SING N N 26 LTX C3 C2 SING N N 27 LTX C13 C14 SING N N 28 LTX C15 C14 DOUB N Z 29 LTX SG2 C6 SING N N 30 LTX SG2 CB2 SING N N 31 LTX CA2 CB2 SING N N 32 LTX CA2 N2 SING N N 33 LTX N2 CD1 SING N N 34 LTX CD1 CG1 SING N N 35 LTX CD1 OE1 DOUB N N 36 LTX O11 C23 DOUB N N 37 LTX CG1 CB1 SING N N 38 LTX N1 CA1 SING N N 39 LTX C23 O12 SING N N 40 LTX C23 CA1 SING N N 41 LTX CB1 CA1 SING N N 42 LTX O2 H1 SING N N 43 LTX C2 H2 SING N N 44 LTX C2 H3 SING N N 45 LTX C3 H4 SING N N 46 LTX C3 H5 SING N N 47 LTX C4 H6 SING N N 48 LTX C4 H7 SING N N 49 LTX C5 H8 SING N N 50 LTX O3 H9 SING N N 51 LTX C6 H10 SING N N 52 LTX C7 H11 SING N N 53 LTX C8 H12 SING N N 54 LTX C9 H13 SING N N 55 LTX C10 H14 SING N N 56 LTX C11 H15 SING N N 57 LTX C12 H16 SING N N 58 LTX C13 H17 SING N N 59 LTX C13 H18 SING N N 60 LTX C14 H19 SING N N 61 LTX C15 H20 SING N N 62 LTX C16 H21 SING N N 63 LTX C16 H22 SING N N 64 LTX C17 H23 SING N N 65 LTX C17 H24 SING N N 66 LTX C18 H25 SING N N 67 LTX C18 H26 SING N N 68 LTX C19 H27 SING N N 69 LTX C19 H28 SING N N 70 LTX C20 H29 SING N N 71 LTX C20 H30 SING N N 72 LTX C20 H31 SING N N 73 LTX O31 H32 SING N N 74 LTX CA3 H33 SING N N 75 LTX CA3 H34 SING N N 76 LTX N3 H35 SING N N 77 LTX CA2 H36 SING N N 78 LTX CB2 H37 SING N N 79 LTX CB2 H38 SING N N 80 LTX N2 H39 SING N N 81 LTX CG1 H40 SING N N 82 LTX CG1 H41 SING N N 83 LTX CB1 H42 SING N N 84 LTX CB1 H43 SING N N 85 LTX CA1 H44 SING N N 86 LTX N1 H45 SING N N 87 LTX N1 H46 SING N N 88 LTX O12 H48 SING N N 89 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LTX InChI InChI 1.03 "InChI=1S/C30H47N3O9S/c1-2-3-4-5-6-7-8-9-10-11-12-13-16-25(24(34)15-14-17-27(36)37)43-21-23(29(40)32-20-28(38)39)33-26(35)19-18-22(31)30(41)42/h6-7,9-13,16,22-25,34H,2-5,8,14-15,17-21,31H2,1H3,(H,32,40)(H,33,35)(H,36,37)(H,38,39)(H,41,42)/b7-6-,10-9-,12-11+,16-13+/t22-,23-,24-,25+/m0/s1" LTX InChIKey InChI 1.03 GWNVDXQDILPJIG-NXOLIXFESA-N LTX SMILES_CANONICAL CACTVS 3.385 "CCCCC\C=C/C\C=C/C=C/C=C/[C@@H](SC[C@H](NC(=O)CC[C@H](N)C(O)=O)C(=O)NCC(O)=O)[C@@H](O)CCCC(O)=O" LTX SMILES CACTVS 3.385 "CCCCCC=CCC=CC=CC=C[CH](SC[CH](NC(=O)CC[CH](N)C(O)=O)C(=O)NCC(O)=O)[CH](O)CCCC(O)=O" LTX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "CCCCC/C=C\C/C=C\C=C\C=C\[C@H]([C@H](CCCC(=O)O)O)SC[C@@H](C(=O)NCC(=O)O)NC(=O)CC[C@@H](C(=O)O)N" LTX SMILES "OpenEye OEToolkits" 2.0.4 "CCCCCC=CCC=CC=CC=CC(C(CCCC(=O)O)O)SCC(C(=O)NCC(=O)O)NC(=O)CCC(C(=O)O)N" # _pdbx_chem_comp_identifier.comp_id LTX _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.4 _pdbx_chem_comp_identifier.identifier "(5~{S},6~{R},7~{E},9~{E},11~{Z},14~{Z})-6-[(2~{R})-2-[[(4~{S})-4-azanyl-5-oxidanyl-5-oxidanylidene-pentanoyl]amino]-3-(2-hydroxy-2-oxoethylamino)-3-oxidanylidene-propyl]sulfanyl-5-oxidanyl-icosa-7,9,11,14-tetraenoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LTX "Create component" 2016-01-04 RCSB LTX "Initial release" 2016-05-11 RCSB LTX "Other modification" 2017-05-18 RCSB LTX "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id LTX _pdbx_chem_comp_synonyms.name "Leukotriene C4" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##