data_LUT # _chem_comp.id LUT _chem_comp.name "(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C40 H56 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ;(3R,3'R)-BETA,BETA-CAROTENE-3,3'-DIOL; LUTEIN ; _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2003-12-22 _chem_comp.pdbx_modified_date 2020-05-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 568.871 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LUT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details "not provided" _chem_comp.pdbx_ideal_coordinates_missing_flag Y _chem_comp.pdbx_model_coordinates_db_code 1RWT _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LUT C1 C1 C 0 1 N N N -9.246 23.009 98.131 ? ? ? C1 LUT 1 LUT C2 C2 C 0 1 N N N -9.339 22.412 96.709 ? ? ? C2 LUT 2 LUT C3 C3 C 0 1 N N S -9.419 20.894 96.550 ? ? ? C3 LUT 3 LUT C4 C4 C 0 1 N N N -8.719 20.113 97.661 ? ? ? C4 LUT 4 LUT C5 C5 C 0 1 N N N -8.708 20.679 99.042 ? ? ? C5 LUT 5 LUT C6 C6 C 0 1 N N N -8.945 22.014 99.296 ? ? ? C6 LUT 6 LUT C7 C7 C 0 1 N N N -8.931 22.544 100.674 ? ? ? C7 LUT 7 LUT C8 C8 C 0 1 N N N -7.857 22.835 101.435 ? ? ? C8 LUT 8 LUT C9 C9 C 0 1 N N N -7.877 23.227 102.846 ? ? ? C9 LUT 9 LUT C10 C10 C 0 1 N N N -6.709 23.590 103.422 ? ? ? C10 LUT 10 LUT C11 C11 C 0 1 N N N -6.519 24.020 104.785 ? ? ? C11 LUT 11 LUT C12 C12 C 0 1 N N N -5.345 24.542 105.170 ? ? ? C12 LUT 12 LUT C13 C13 C 0 1 N N N -4.932 25.083 106.473 ? ? ? C13 LUT 13 LUT C14 C14 C 0 1 N N N -3.710 25.656 106.537 ? ? ? C14 LUT 14 LUT C15 C15 C 0 1 N N N -3.087 26.329 107.642 ? ? ? C15 LUT 15 LUT C16 C16 C 0 1 N N N -10.557 23.772 98.397 ? ? ? C16 LUT 16 LUT C17 C17 C 0 1 N N N -8.114 24.047 98.016 ? ? ? C17 LUT 17 LUT C18 C18 C 0 1 N N N -8.422 19.561 99.982 ? ? ? C18 LUT 18 LUT C19 C19 C 0 1 N N N -9.210 23.250 103.543 ? ? ? C19 LUT 19 LUT C20 C20 C 0 1 N N N -5.909 25.035 107.610 ? ? ? C20 LUT 20 LUT O3 O3 O 0 1 N N N -8.912 20.501 95.283 ? ? ? O3 LUT 21 LUT C21 C21 C 0 1 N N N 3.820 34.427 114.850 ? ? ? C21 LUT 22 LUT C22 C22 C 0 1 N N N 4.184 35.192 116.140 ? ? ? C22 LUT 23 LUT C23 C23 C 0 1 N N R 5.298 34.565 116.982 ? ? ? C23 LUT 24 LUT C24 C24 C 0 1 N N N 5.298 33.032 116.958 ? ? ? C24 LUT 25 LUT C25 C25 C 0 1 N N N 4.593 32.296 116.072 ? ? ? C25 LUT 26 LUT C26 C26 C 0 1 N N S 3.696 32.873 114.983 ? ? ? C26 LUT 27 LUT C27 C27 C 0 1 N N N 3.861 32.092 113.677 ? ? ? C27 LUT 28 LUT C28 C28 C 0 1 N N N 2.871 31.401 113.052 ? ? ? C28 LUT 29 LUT C29 C29 C 0 1 N N N 2.873 30.854 111.681 ? ? ? C29 LUT 30 LUT C30 C30 C 0 1 N N N 1.776 30.187 111.261 ? ? ? C30 LUT 31 LUT C31 C31 C 0 1 N N N 1.561 29.578 109.973 ? ? ? C31 LUT 32 LUT C32 C32 C 0 1 N N N 0.416 28.916 109.713 ? ? ? C32 LUT 33 LUT C33 C33 C 0 1 N N N -0.012 28.208 108.497 ? ? ? C33 LUT 34 LUT C34 C34 C 0 1 N N N -1.224 27.613 108.519 ? ? ? C34 LUT 35 LUT C35 C35 C 0 1 N N N -1.872 26.875 107.473 ? ? ? C35 LUT 36 LUT C36 C36 C 0 1 N N N 4.890 34.800 113.786 ? ? ? C36 LUT 37 LUT C37 C37 C 0 1 N N N 2.477 34.998 114.374 ? ? ? C37 LUT 38 LUT C38 C38 C 0 1 N N N 4.743 30.829 116.263 ? ? ? C38 LUT 39 LUT C39 C39 C 0 1 N N N 4.098 31.064 110.840 ? ? ? C39 LUT 40 LUT C40 C40 C 0 1 N N N 0.928 28.191 107.320 ? ? ? C40 LUT 41 LUT O23 O23 O 0 1 N N N 5.225 35.042 118.319 ? ? ? O23 LUT 42 LUT H21 1H2 H 0 1 N N N -10.204 22.875 96.180 ? ? ? H21 LUT 43 LUT H22 2H2 H 0 1 N N N -8.484 22.792 96.102 ? ? ? H22 LUT 44 LUT H3 H3 H 0 1 N N N -10.501 20.637 96.626 ? ? ? H3 LUT 45 LUT H41 1H4 H 0 1 N N N -9.141 19.082 97.697 ? ? ? H41 LUT 46 LUT H42 2H4 H 0 1 N N N -7.669 19.905 97.348 ? ? ? H42 LUT 47 LUT H7 H7 H 0 1 N N N -9.866 22.755 101.218 ? ? ? H7 LUT 48 LUT H8 H8 H 0 1 N N N -6.911 22.747 100.873 ? ? ? H8 LUT 49 LUT H10 H10 H 0 1 N N N -5.850 23.531 102.731 ? ? ? H10 LUT 50 LUT H11 H11 H 0 1 N N N -7.299 23.947 105.560 ? ? ? H11 LUT 51 LUT H12 H12 H 0 1 N N N -4.641 24.524 104.320 ? ? ? H12 LUT 52 LUT H14 H14 H 0 1 N N N -3.161 25.564 105.584 ? ? ? H14 LUT 53 LUT H15 H15 H 0 1 N N N -3.549 26.428 108.638 ? ? ? H15 LUT 54 LUT H161 1H16 H 0 0 N N N -10.489 24.202 99.423 ? ? ? H161 LUT 55 LUT H162 2H16 H 0 0 N N N -10.781 24.537 97.617 ? ? ? H162 LUT 56 LUT H163 3H16 H 0 0 N N N -11.465 23.142 98.247 ? ? ? H163 LUT 57 LUT H171 1H17 H 0 0 N N N -8.046 24.477 99.042 ? ? ? H171 LUT 58 LUT H172 2H17 H 0 0 N N N -7.153 23.639 97.623 ? ? ? H172 LUT 59 LUT H173 3H17 H 0 0 N N N -8.260 24.801 97.208 ? ? ? H173 LUT 60 LUT H181 1H18 H 0 0 N N N -8.413 19.983 101.013 ? ? ? H181 LUT 61 LUT H182 2H18 H 0 0 N N N -9.128 18.706 99.868 ? ? ? H182 LUT 62 LUT H183 3H18 H 0 0 N N N -7.485 19.010 99.730 ? ? ? H183 LUT 63 LUT H191 1H19 H 0 0 N N N -9.225 23.548 104.617 ? ? ? H191 LUT 64 LUT H192 2H19 H 0 0 N N N -9.913 23.898 102.970 ? ? ? H192 LUT 65 LUT H193 3H19 H 0 0 N N N -9.702 22.255 103.429 ? ? ? H193 LUT 66 LUT H201 1H20 H 0 0 N N N -5.595 25.445 108.598 ? ? ? H201 LUT 67 LUT H202 2H20 H 0 0 N N N -6.856 25.532 107.295 ? ? ? H202 LUT 68 LUT H203 3H20 H 0 0 N N N -6.253 23.983 107.747 ? ? ? H203 LUT 69 LUT HO3 HO3 H 0 1 N N N -8.961 19.557 95.184 ? ? ? HO3 LUT 70 LUT H221 1H22 H 0 0 N N N 4.436 36.250 115.898 ? ? ? H221 LUT 71 LUT H222 2H22 H 0 0 N N N 3.272 35.344 116.764 ? ? ? H222 LUT 72 LUT H23 H23 H 0 1 N N N 6.261 34.880 116.518 ? ? ? H23 LUT 73 LUT H24 H24 H 0 1 N N N 5.865 32.390 117.652 ? ? ? H24 LUT 74 LUT H26 H26 H 0 1 N N N 2.633 32.729 115.289 ? ? ? H26 LUT 75 LUT H27 H27 H 0 1 N N N 4.809 32.018 113.118 ? ? ? H27 LUT 76 LUT H28 H28 H 0 1 N N N 1.995 31.273 113.710 ? ? ? H28 LUT 77 LUT H30 H30 H 0 1 N N N 0.990 30.135 112.033 ? ? ? H30 LUT 78 LUT H31 H31 H 0 1 N N N 2.300 29.620 109.155 ? ? ? H31 LUT 79 LUT H32 H32 H 0 1 N N N -0.245 28.958 110.594 ? ? ? H32 LUT 80 LUT H34 H34 H 0 1 N N N -1.735 27.742 109.487 ? ? ? H34 LUT 81 LUT H35 H35 H 0 1 N N N -1.410 26.718 106.483 ? ? ? H35 LUT 82 LUT H361 1H36 H 0 0 N N N 4.627 34.247 112.854 ? ? ? H361 LUT 83 LUT H362 2H36 H 0 0 N N N 4.989 35.899 113.630 ? ? ? H362 LUT 84 LUT H363 3H36 H 0 0 N N N 5.934 34.610 114.128 ? ? ? H363 LUT 85 LUT H371 1H37 H 0 0 N N N 2.214 34.445 113.442 ? ? ? H371 LUT 86 LUT H372 2H37 H 0 0 N N N 1.679 34.959 115.151 ? ? ? H372 LUT 87 LUT H373 3H37 H 0 0 N N N 2.488 36.105 114.243 ? ? ? H373 LUT 88 LUT H381 1H38 H 0 0 N N N 4.160 30.221 115.531 ? ? ? H381 LUT 89 LUT H382 2H38 H 0 0 N N N 5.819 30.537 116.248 ? ? ? H382 LUT 90 LUT H383 3H38 H 0 0 N N N 4.485 30.539 117.308 ? ? ? H383 LUT 91 LUT H391 1H39 H 0 0 N N N 4.099 30.650 109.804 ? ? ? H391 LUT 92 LUT H392 2H39 H 0 0 N N N 4.330 32.153 110.798 ? ? ? H392 LUT 93 LUT H393 3H39 H 0 0 N N N 4.988 30.677 111.388 ? ? ? H393 LUT 94 LUT H401 1H40 H 0 0 N N N 0.603 27.654 106.398 ? ? ? H401 LUT 95 LUT H402 2H40 H 0 0 N N N 1.201 29.239 107.055 ? ? ? H402 LUT 96 LUT H403 3H40 H 0 0 N N N 1.915 27.790 107.647 ? ? ? H403 LUT 97 LUT H1 H1 H 0 1 N N N 5.916 34.652 118.841 ? ? ? H1 LUT 98 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LUT C1 C2 SING N N 1 LUT C1 C6 SING N N 2 LUT C1 C16 SING N N 3 LUT C1 C17 SING N N 4 LUT C2 C3 SING N N 5 LUT C2 H21 SING N N 6 LUT C2 H22 SING N N 7 LUT C3 C4 SING N N 8 LUT C3 O3 SING N N 9 LUT C3 H3 SING N N 10 LUT C4 C5 SING N N 11 LUT C4 H41 SING N N 12 LUT C4 H42 SING N N 13 LUT C5 C6 DOUB N N 14 LUT C5 C18 SING N N 15 LUT C6 C7 SING N N 16 LUT C7 C8 DOUB N E 17 LUT C7 H7 SING N N 18 LUT C8 C9 SING N N 19 LUT C8 H8 SING N N 20 LUT C9 C10 DOUB N E 21 LUT C9 C19 SING N N 22 LUT C10 C11 SING N N 23 LUT C10 H10 SING N N 24 LUT C11 C12 DOUB N E 25 LUT C11 H11 SING N N 26 LUT C12 C13 SING N N 27 LUT C12 H12 SING N N 28 LUT C13 C14 DOUB N E 29 LUT C13 C20 SING N N 30 LUT C14 C15 SING N N 31 LUT C14 H14 SING N N 32 LUT C15 C35 DOUB N E 33 LUT C15 H15 SING N N 34 LUT C16 H161 SING N N 35 LUT C16 H162 SING N N 36 LUT C16 H163 SING N N 37 LUT C17 H171 SING N N 38 LUT C17 H172 SING N N 39 LUT C17 H173 SING N N 40 LUT C18 H181 SING N N 41 LUT C18 H182 SING N N 42 LUT C18 H183 SING N N 43 LUT C19 H191 SING N N 44 LUT C19 H192 SING N N 45 LUT C19 H193 SING N N 46 LUT C20 H201 SING N N 47 LUT C20 H202 SING N N 48 LUT C20 H203 SING N N 49 LUT O3 HO3 SING N N 50 LUT C21 C22 SING N N 51 LUT C21 C26 SING N N 52 LUT C21 C36 SING N N 53 LUT C21 C37 SING N N 54 LUT C22 C23 SING N N 55 LUT C22 H221 SING N N 56 LUT C22 H222 SING N N 57 LUT C23 C24 SING N N 58 LUT C23 O23 SING N N 59 LUT C23 H23 SING N N 60 LUT C24 C25 DOUB N N 61 LUT C24 H24 SING N N 62 LUT C25 C26 SING N N 63 LUT C25 C38 SING N N 64 LUT C26 C27 SING N N 65 LUT C26 H26 SING N N 66 LUT C27 C28 DOUB N E 67 LUT C27 H27 SING N N 68 LUT C28 C29 SING N N 69 LUT C28 H28 SING N N 70 LUT C29 C30 DOUB N E 71 LUT C29 C39 SING N N 72 LUT C30 C31 SING N N 73 LUT C30 H30 SING N N 74 LUT C31 C32 DOUB N E 75 LUT C31 H31 SING N N 76 LUT C32 C33 SING N N 77 LUT C32 H32 SING N N 78 LUT C33 C34 DOUB N E 79 LUT C33 C40 SING N N 80 LUT C34 C35 SING N N 81 LUT C34 H34 SING N N 82 LUT C35 H35 SING N N 83 LUT C36 H361 SING N N 84 LUT C36 H362 SING N N 85 LUT C36 H363 SING N N 86 LUT C37 H371 SING N N 87 LUT C37 H372 SING N N 88 LUT C37 H373 SING N N 89 LUT C38 H381 SING N N 90 LUT C38 H382 SING N N 91 LUT C38 H383 SING N N 92 LUT C39 H391 SING N N 93 LUT C39 H392 SING N N 94 LUT C39 H393 SING N N 95 LUT C40 H401 SING N N 96 LUT C40 H402 SING N N 97 LUT C40 H403 SING N N 98 LUT O23 H1 SING N N 99 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LUT SMILES ACDLabs 10.04 "OC2CC(=C(\C=C\C(=C\C=C\C(=C\C=C\C=C(\C=C\C=C(\C=C\C1C(=CC(O)CC1(C)C)C)C)C)C)C)C(C)(C)C2)C" LUT SMILES_CANONICAL CACTVS 3.341 "CC(=C/C=C/C=C(C)/C=C/C=C(C)/C=C/C1=C(C)C[C@H](O)CC1(C)C)\C=C\C=C(C)\C=C\[C@H]2C(=C[C@H](O)CC2(C)C)C" LUT SMILES CACTVS 3.341 "CC(=CC=CC=C(C)C=CC=C(C)C=CC1=C(C)C[CH](O)CC1(C)C)C=CC=C(C)C=C[CH]2C(=C[CH](O)CC2(C)C)C" LUT SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC1=C(C(C[C@H](C1)O)(C)C)\C=C\C(=C\C=C\C(=C\C=C\C=C(/C)\C=C\C=C(/C)\C=C\[C@H]2C(=C[C@@H](CC2(C)C)O)C)\C)\C" LUT SMILES "OpenEye OEToolkits" 1.5.0 "CC1=C(C(CC(C1)O)(C)C)C=CC(=CC=CC(=CC=CC=C(C)C=CC=C(C)C=CC2C(=CC(CC2(C)C)O)C)C)C" LUT InChI InChI 1.03 "InChI=1S/C40H56O2/c1-29(17-13-19-31(3)21-23-37-33(5)25-35(41)27-39(37,7)8)15-11-12-16-30(2)18-14-20-32(4)22-24-38-34(6)26-36(42)28-40(38,9)10/h11-25,35-37,41-42H,26-28H2,1-10H3/b12-11+,17-13+,18-14+,23-21+,24-22+,29-15+,30-16+,31-19+,32-20+/t35-,36-,37-/m0/s1" LUT InChIKey InChI 1.03 KBPHJBAIARWVSC-NSIPBSJQSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier LUT "SYSTEMATIC NAME" ACDLabs 10.04 "(3R,3'S,6R)-4,5-didehydro-5,6-dihydro-beta,beta-carotene-3,3'-diol" LUT "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(1S)-4-[(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1R,4R)-4-hydroxy-2,6,6-trimethyl-1-cyclohex-2-enyl]-3,7,12,16-tetramethyl-octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]-3,5,5-trimethyl-cyclohex-3-en-1-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LUT "Create component" 2003-12-22 RCSB LUT "Modify descriptor" 2011-06-04 RCSB LUT "Modify synonyms" 2020-05-27 PDBE # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 LUT "(3R,3'R)-BETA,BETA-CAROTENE-3,3'-DIOL" ? ? 2 LUT LUTEIN ? ? #