data_LWU # _chem_comp.id LWU _chem_comp.name "1-(2-(2-((6-(dihydroxymethyl)-2-phenylpyrimidin-4-yl)methylene)hydrazineyl)-2-oxoethyl)pyridin-1-ium" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H20 N5 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "~{N}'-[[6-[bis(oxidanyl)methyl]-2-phenyl-pyrimidin-4-yl]methyl]-2-pyridin-1-yl-ethanehydrazide" _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2022-07-15 _chem_comp.pdbx_modified_date 2023-06-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 366.394 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LWU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8AEV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LWU C12 C1 C 0 1 N N N 199.914 98.651 6.867 0.034 -0.637 -1.795 C12 LWU 1 LWU C02 C2 C 0 1 N N N 197.955 96.893 9.125 -3.342 -0.077 -0.645 C02 LWU 2 LWU C03 C3 C 0 1 N N N 197.828 96.502 10.562 -4.695 0.016 -1.301 C03 LWU 3 LWU C05 C4 C 0 1 Y N N 196.816 94.269 10.763 -6.021 1.509 0.033 C05 LWU 4 LWU C06 C5 C 0 1 Y N N 195.723 93.452 10.991 -6.979 1.782 0.991 C06 LWU 5 LWU C07 C6 C 0 1 Y N N 194.477 94.055 11.274 -7.621 0.729 1.623 C07 LWU 6 LWU C08 C7 C 0 1 Y N N 194.346 95.460 11.318 -7.274 -0.565 1.267 C08 LWU 7 LWU C09 C8 C 0 1 Y N N 195.459 96.258 11.079 -6.306 -0.761 0.301 C09 LWU 8 LWU C13 C9 C 0 1 Y N N 200.234 99.148 5.497 1.370 -0.724 -1.103 C13 LWU 9 LWU C14 C10 C 0 1 Y N N 199.290 99.257 4.463 1.891 -1.955 -0.735 C14 LWU 10 LWU C15 C11 C 0 1 Y N N 199.743 99.787 3.221 3.124 -1.991 -0.100 C15 LWU 11 LWU C16 C12 C 0 1 N N N 198.779 99.950 2.065 3.729 -3.306 0.318 C16 LWU 12 LWU C20 C13 C 0 1 Y N N 201.892 100.051 4.068 3.236 0.304 -0.232 C20 LWU 13 LWU C21 C14 C 0 1 Y N N 203.294 100.487 3.799 3.984 1.555 0.040 C21 LWU 14 LWU C22 C15 C 0 1 Y N N 203.577 101.247 2.653 3.452 2.786 -0.341 C22 LWU 15 LWU C23 C16 C 0 1 Y N N 204.888 101.660 2.388 4.153 3.947 -0.084 C23 LWU 16 LWU C24 C17 C 0 1 Y N N 205.924 101.314 3.269 5.381 3.891 0.549 C24 LWU 17 LWU C25 C18 C 0 1 Y N N 205.641 100.556 4.415 5.914 2.673 0.929 C25 LWU 18 LWU C26 C19 C 0 1 Y N N 204.332 100.142 4.680 5.220 1.506 0.684 C26 LWU 19 LWU N04 N1 N 1 1 Y N N 196.673 95.656 10.819 -5.716 0.265 -0.281 N04 LWU 20 LWU N10 N2 N 0 1 N N N 198.843 97.702 8.646 -2.244 -0.303 -1.394 N10 LWU 21 LWU N11 N3 N 0 1 N N N 198.845 98.001 7.234 -1.017 -0.388 -0.800 N11 LWU 22 LWU N19 N4 N 0 1 Y N N 201.021 100.179 3.017 3.762 -0.857 0.133 N19 LWU 23 LWU N27 N5 N 0 1 Y N N 201.547 99.562 5.309 2.063 0.372 -0.845 N27 LWU 24 LWU O01 O1 O 0 1 N N N 197.001 96.284 8.338 -3.240 0.052 0.556 O01 LWU 25 LWU O17 O2 O 0 1 N N N 197.854 98.899 2.063 4.541 -3.110 1.477 O17 LWU 26 LWU O18 O3 O 0 1 N N N 199.498 99.937 0.814 2.686 -4.236 0.619 O18 LWU 27 LWU H1 H1 H 0 1 N N N 200.753 97.991 7.133 0.051 0.179 -2.517 H1 LWU 28 LWU H2 H2 H 0 1 N N N 199.935 99.546 7.506 -0.169 -1.576 -2.311 H2 LWU 29 LWU H3 H3 H 0 1 N N N 198.736 95.956 10.859 -4.694 0.835 -2.022 H3 LWU 30 LWU H4 H4 H 0 1 N N N 197.735 97.416 11.167 -4.915 -0.920 -1.815 H4 LWU 31 LWU H5 H5 H 0 1 N N N 197.779 93.834 10.542 -5.519 2.324 -0.468 H5 LWU 32 LWU H6 H6 H 0 1 N N N 195.820 92.377 10.953 -7.224 2.803 1.244 H6 LWU 33 LWU H7 H7 H 0 1 N N N 193.614 93.433 11.459 -8.374 0.913 2.376 H7 LWU 34 LWU H8 H8 H 0 1 N N N 193.389 95.911 11.536 -7.754 -1.410 1.740 H8 LWU 35 LWU H9 H9 H 0 1 N N N 195.375 97.335 11.097 -6.030 -1.766 0.018 H9 LWU 36 LWU H10 H10 H 0 1 N N N 198.264 98.952 4.604 1.348 -2.867 -0.937 H10 LWU 37 LWU H11 H11 H 0 1 N N N 202.781 101.514 1.974 2.493 2.830 -0.836 H11 LWU 38 LWU H12 H12 H 0 1 N N N 205.102 102.245 1.506 3.741 4.901 -0.379 H12 LWU 39 LWU H13 H13 H 0 1 N N N 206.936 101.630 3.065 5.926 4.802 0.747 H13 LWU 40 LWU H14 H14 H 0 1 N N N 206.437 100.291 5.095 6.874 2.635 1.423 H14 LWU 41 LWU H15 H15 H 0 1 N N N 204.119 99.557 5.562 5.635 0.555 0.985 H15 LWU 42 LWU H16 H16 H 0 1 N N N 199.523 98.117 9.250 -2.325 -0.406 -2.355 H16 LWU 43 LWU H17 H17 H 0 1 N N N 198.042 98.558 7.022 -1.011 -1.097 -0.082 H17 LWU 44 LWU H18 H18 H 0 1 N N N 197.374 98.897 2.883 4.060 -2.762 2.240 H18 LWU 45 LWU H19 H19 H 0 1 N N N 200.129 100.647 0.804 3.003 -5.107 0.896 H19 LWU 46 LWU H20 H20 H 0 1 N N N 198.258 100.912 2.178 4.342 -3.698 -0.494 H20 LWU 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LWU O18 C16 SING N N 1 LWU O17 C16 SING N N 2 LWU C16 C15 SING N N 3 LWU C23 C22 DOUB Y N 4 LWU C23 C24 SING Y N 5 LWU C22 C21 SING Y N 6 LWU N19 C15 DOUB Y N 7 LWU N19 C20 SING Y N 8 LWU C15 C14 SING Y N 9 LWU C24 C25 DOUB Y N 10 LWU C21 C20 SING N N 11 LWU C21 C26 DOUB Y N 12 LWU C20 N27 DOUB Y N 13 LWU C25 C26 SING Y N 14 LWU C14 C13 DOUB Y N 15 LWU N27 C13 SING Y N 16 LWU C13 C12 SING N N 17 LWU C12 N11 SING N N 18 LWU N11 N10 SING N N 19 LWU O01 C02 DOUB N N 20 LWU N10 C02 SING N N 21 LWU C02 C03 SING N N 22 LWU C03 N04 SING N N 23 LWU C05 N04 DOUB Y N 24 LWU C05 C06 SING Y N 25 LWU N04 C09 SING Y N 26 LWU C06 C07 DOUB Y N 27 LWU C09 C08 DOUB Y N 28 LWU C07 C08 SING Y N 29 LWU C12 H1 SING N N 30 LWU C12 H2 SING N N 31 LWU C03 H3 SING N N 32 LWU C03 H4 SING N N 33 LWU C05 H5 SING N N 34 LWU C06 H6 SING N N 35 LWU C07 H7 SING N N 36 LWU C08 H8 SING N N 37 LWU C09 H9 SING N N 38 LWU C14 H10 SING N N 39 LWU C22 H11 SING N N 40 LWU C23 H12 SING N N 41 LWU C24 H13 SING N N 42 LWU C25 H14 SING N N 43 LWU C26 H15 SING N N 44 LWU N10 H16 SING N N 45 LWU N11 H17 SING N N 46 LWU O17 H18 SING N N 47 LWU O18 H19 SING N N 48 LWU C16 H20 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LWU InChI InChI 1.06 "InChI=1S/C19H19N5O3/c25-17(13-24-9-5-2-6-10-24)23-20-12-15-11-16(19(26)27)22-18(21-15)14-7-3-1-4-8-14/h1-11,19-20,26-27H,12-13H2/p+1" LWU InChIKey InChI 1.06 JPVVLHGFGWJHHI-UHFFFAOYSA-O LWU SMILES_CANONICAL CACTVS 3.385 "OC(O)c1cc(CNNC(=O)C[n+]2ccccc2)nc(n1)c3ccccc3" LWU SMILES CACTVS 3.385 "OC(O)c1cc(CNNC(=O)C[n+]2ccccc2)nc(n1)c3ccccc3" LWU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)c2nc(cc(n2)C(O)O)CNNC(=O)C[n+]3ccccc3" LWU SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)c2nc(cc(n2)C(O)O)CNNC(=O)C[n+]3ccccc3" # _pdbx_chem_comp_identifier.comp_id LWU _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}'-[[6-[bis(oxidanyl)methyl]-2-phenyl-pyrimidin-4-yl]methyl]-2-pyridin-1-ium-1-yl-ethanehydrazide" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id LWU _pdbx_chem_comp_synonyms.name "~{N}'-[[6-[bis(oxidanyl)methyl]-2-phenyl-pyrimidin-4-yl]methyl]-2-pyridin-1-yl-ethanehydrazide" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LWU "Create component" 2022-07-15 PDBE LWU "Modify descriptor" 2022-08-22 RCSB LWU "Initial release" 2023-06-14 RCSB #