data_LXC # _chem_comp.id LXC _chem_comp.name beta-L-xylopyranose _chem_comp.type "L-saccharide, beta linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C5 H10 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "beta-L-xylose; L-xylose; xylose; L-XYLOSE (CYCLIC FORM)" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2002-03-13 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 150.130 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LXC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1GW9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 LXC beta-L-xylose PDB ? 2 LXC L-xylose PDB ? 3 LXC xylose PDB ? 4 LXC "L-XYLOSE (CYCLIC FORM)" PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LXC C5 C5 C 0 1 N N N 57.791 23.126 72.589 1.710 -0.215 0.593 C5 LXC 1 LXC O5 O5 O 0 1 N N N 58.286 23.993 73.640 1.637 0.331 -0.721 O5 LXC 2 LXC C1 C1 C 0 1 N N S 57.304 25.132 73.906 0.509 -0.253 -1.370 C1 LXC 3 LXC O1 O1 O 0 1 N Y N 57.819 25.991 74.942 0.501 0.130 -2.746 O1 LXC 4 LXC C2 C2 C 0 1 N N S 55.970 24.503 74.377 -0.780 0.228 -0.701 C2 LXC 5 LXC O2 O2 O 0 1 N N N 54.943 25.512 74.638 -1.907 -0.337 -1.372 O2 LXC 6 LXC C3 C3 C 0 1 N N R 55.463 23.525 73.311 -0.779 -0.213 0.766 C3 LXC 7 LXC O3 O3 O 0 1 N N N 54.212 22.887 73.747 -1.904 0.354 1.439 O3 LXC 8 LXC C4 C4 C 0 1 N N S 56.568 22.465 73.005 0.519 0.269 1.423 C4 LXC 9 LXC O4 O4 O 0 1 N N N 56.097 21.564 71.991 0.611 -0.260 2.747 O4 LXC 10 LXC H51 H5C1 H 0 1 N N N 58.564 22.395 72.258 2.637 0.105 1.068 H51 LXC 11 LXC H52 H5C2 H 0 1 N N N 57.658 23.675 71.628 1.691 -1.304 0.535 H52 LXC 12 LXC H1 H1 H 0 1 N N N 57.139 25.719 72.972 0.571 -1.338 -1.297 H1 LXC 13 LXC HO1 HA H 0 1 N Y N 57.208 26.699 75.107 1.325 -0.194 -3.132 HO1 LXC 14 LXC H2 H2 H 0 1 N N N 56.158 23.936 75.318 -0.833 1.316 -0.752 H2 LXC 15 LXC HO2 HB H 0 1 N Y N 54.125 25.126 74.927 -1.865 -0.037 -2.291 HO2 LXC 16 LXC H3 H3 H 0 1 N N N 55.258 24.098 72.377 -0.831 -1.301 0.820 H3 LXC 17 LXC HO3 HC H 0 1 N Y N 53.540 23.532 73.933 -1.864 0.051 2.356 HO3 LXC 18 LXC H4 H4 H 0 1 N N N 56.773 21.883 73.934 0.523 1.358 1.465 H4 LXC 19 LXC HO4 HD H 0 1 N Y N 55.296 21.131 72.263 1.441 0.064 3.121 HO4 LXC 20 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LXC C5 O5 SING N N 1 LXC C5 C4 SING N N 2 LXC C5 H51 SING N N 3 LXC C5 H52 SING N N 4 LXC O5 C1 SING N N 5 LXC C1 O1 SING N N 6 LXC C1 C2 SING N N 7 LXC C1 H1 SING N N 8 LXC O1 HO1 SING N N 9 LXC C2 O2 SING N N 10 LXC C2 C3 SING N N 11 LXC C2 H2 SING N N 12 LXC O2 HO2 SING N N 13 LXC C3 O3 SING N N 14 LXC C3 C4 SING N N 15 LXC C3 H3 SING N N 16 LXC O3 HO3 SING N N 17 LXC C4 O4 SING N N 18 LXC C4 H4 SING N N 19 LXC O4 HO4 SING N N 20 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LXC SMILES ACDLabs 10.04 "OC1C(O)COC(O)C1O" LXC SMILES_CANONICAL CACTVS 3.341 "O[C@H]1CO[C@H](O)[C@@H](O)[C@@H]1O" LXC SMILES CACTVS 3.341 "O[CH]1CO[CH](O)[CH](O)[CH]1O" LXC SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C1[C@@H]([C@H]([C@@H]([C@H](O1)O)O)O)O" LXC SMILES "OpenEye OEToolkits" 1.5.0 "C1C(C(C(C(O1)O)O)O)O" LXC InChI InChI 1.03 "InChI=1S/C5H10O5/c6-2-1-10-5(9)4(8)3(2)7/h2-9H,1H2/t2-,3+,4-,5-/m0/s1" LXC InChIKey InChI 1.03 SRBFZHDQGSBBOR-QTBDOELSSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier LXC "SYSTEMATIC NAME" ACDLabs 10.04 beta-L-xylopyranose LXC "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S,3S,4R,5S)-oxane-2,3,4,5-tetrol" LXC "CONDENSED IUPAC CARBOHYDRATE SYMBOL" GMML 1.0 LXylpb LXC "COMMON NAME" GMML 1.0 b-L-xylopyranose LXC "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 b-L-Xylp LXC "SNFG CARBOHYDRATE SYMBOL" GMML 1.0 Xyl # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support LXC "CARBOHYDRATE ISOMER" L PDB ? LXC "CARBOHYDRATE RING" pyranose PDB ? LXC "CARBOHYDRATE ANOMER" beta PDB ? LXC "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LXC "Create component" 2002-03-13 EBI LXC "Modify descriptor" 2011-06-04 RCSB LXC "Other modification" 2019-08-12 RCSB LXC "Other modification" 2019-12-19 RCSB LXC "Other modification" 2020-07-03 RCSB LXC "Modify name" 2020-07-17 RCSB LXC "Modify synonyms" 2020-07-17 RCSB LXC "Modify atom id" 2020-07-17 RCSB LXC "Modify component atom id" 2020-07-17 RCSB ##