data_M5R # _chem_comp.id M5R _chem_comp.name "5-{(7R)-1-fluoro-3-hydroxy-7-[(3-methylbutyl)amino]-5,6,7,8-tetrahydronaphthalen-2-yl}-1lambda~6~,2,5-thiadiazolidine-1,1,3-trione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H24 F N3 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-03-14 _chem_comp.pdbx_modified_date 2023-07-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 385.454 _chem_comp.one_letter_code ? _chem_comp.three_letter_code M5R _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7UAD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal M5R N1 N1 N 0 1 N N N -21.256 -16.824 -10.683 -2.897 -0.288 -0.290 N1 M5R 1 M5R C4 C1 C 0 1 N N N -23.458 -22.277 -15.640 4.901 -0.318 -0.098 C4 M5R 2 M5R C5 C2 C 0 1 N N R -24.379 -19.960 -15.025 3.045 1.227 0.081 C5 M5R 3 M5R C6 C3 C 0 1 N N N -24.581 -18.684 -15.835 2.753 2.663 0.530 C6 M5R 4 M5R C7 C4 C 0 1 N N N -25.006 -17.547 -14.919 1.592 3.202 -0.304 C7 M5R 5 M5R C8 C5 C 0 1 Y N N -24.044 -17.374 -13.770 0.432 2.241 -0.280 C8 M5R 6 M5R C10 C6 C 0 1 Y N N -22.982 -15.884 -12.173 -1.922 1.898 -0.660 C10 M5R 7 M5R C13 C7 C 0 1 N N N -19.134 -16.764 -9.599 -4.612 -1.887 -0.992 C13 M5R 8 M5R C15 C8 C 0 1 Y N N -23.239 -18.436 -13.336 0.569 0.923 0.096 C15 M5R 9 M5R F F1 F 0 1 N N N -21.620 -19.206 -11.804 -0.403 -1.211 0.453 F M5R 10 M5R C14 C9 C 0 1 Y N N -22.342 -18.188 -12.310 -0.540 0.083 0.090 C14 M5R 11 M5R C11 C10 C 0 1 Y N N -22.177 -16.936 -11.736 -1.784 0.564 -0.286 C11 M5R 12 M5R S S1 S 0 1 N N N -21.624 -16.907 -9.062 -3.964 -0.587 0.957 S M5R 13 M5R O2 O1 O 0 1 N N N -22.170 -18.195 -8.780 -4.690 0.613 1.185 O2 M5R 14 M5R O3 O2 O 0 1 N N N -22.381 -15.764 -8.669 -3.244 -1.279 1.968 O3 M5R 15 M5R N2 N2 N 0 1 N N N -20.065 -16.814 -8.588 -5.017 -1.676 0.268 N2 M5R 16 M5R O1 O3 O 0 1 N N N -17.940 -16.592 -9.364 -5.189 -2.639 -1.748 O1 M5R 17 M5R C12 C11 C 0 1 N N N -19.795 -16.830 -10.954 -3.395 -1.117 -1.395 C12 M5R 18 M5R O O4 O 0 1 N N N -22.900 -14.644 -11.617 -3.138 2.383 -1.028 O M5R 19 M5R C9 C12 C 0 1 Y N N -23.907 -16.118 -13.179 -0.815 2.727 -0.655 C9 M5R 20 M5R C16 C13 C 0 1 N N N -23.233 -19.774 -14.040 1.888 0.337 0.529 C16 M5R 21 M5R N N3 N 0 1 N N N -24.106 -21.015 -16.026 4.295 0.760 0.695 N M5R 22 M5R C3 C14 C 0 1 N N N -24.438 -23.201 -14.937 6.198 -0.777 0.572 C3 M5R 23 M5R C1 C15 C 0 1 N N N -23.764 -24.475 -14.471 6.829 -1.899 -0.254 C1 M5R 24 M5R C2 C16 C 0 1 N N N -24.485 -25.106 -13.309 7.251 -1.352 -1.620 C2 M5R 25 M5R C C17 C 0 1 N N N -23.661 -25.456 -15.617 8.057 -2.443 0.479 C M5R 26 M5R H1 H1 H 0 1 N N N -23.077 -22.777 -16.543 4.208 -1.157 -0.161 H1 M5R 27 M5R H2 H2 H 0 1 N N N -22.620 -22.058 -14.961 5.120 0.048 -1.101 H2 M5R 28 M5R H3 H3 H 0 1 N N N -25.302 -20.193 -14.474 3.135 1.192 -1.005 H3 M5R 29 M5R H4 H4 H 0 1 N N N -23.638 -18.416 -16.334 2.481 2.670 1.585 H4 M5R 30 M5R H5 H5 H 0 1 N N N -25.361 -18.853 -16.592 3.636 3.283 0.374 H5 M5R 31 M5R H6 H6 H 0 1 N N N -25.040 -16.614 -15.500 1.273 4.161 0.102 H6 M5R 32 M5R H7 H7 H 0 1 N N N -26.006 -17.766 -14.518 1.923 3.340 -1.333 H7 M5R 33 M5R H8 H8 H 0 1 N N N -19.803 -16.795 -7.623 -5.783 -2.085 0.700 H8 M5R 34 M5R H9 H9 H 0 1 N N N -19.505 -17.752 -11.479 -3.636 -0.475 -2.242 H9 M5R 35 M5R H10 H10 H 0 1 N N N -19.513 -15.958 -11.562 -2.617 -1.820 -1.693 H10 M5R 36 M5R H11 H11 H 0 1 N N N -22.226 -14.641 -10.948 -3.656 2.742 -0.294 H11 M5R 37 M5R H12 H12 H 0 1 N N N -24.537 -15.307 -13.513 -0.921 3.761 -0.945 H12 M5R 38 M5R H13 H13 H 0 1 N N N -23.299 -20.566 -13.279 2.003 -0.653 0.088 H13 M5R 39 M5R H14 H14 H 0 1 N N N -22.285 -19.872 -14.590 1.902 0.249 1.616 H14 M5R 40 M5R H15 H15 H 0 1 N N N -23.525 -20.599 -16.725 4.141 0.465 1.648 H15 M5R 41 M5R H17 H17 H 0 1 N N N -24.858 -22.679 -14.064 6.891 0.062 0.635 H17 M5R 42 M5R H18 H18 H 0 1 N N N -25.248 -23.460 -15.634 5.979 -1.143 1.575 H18 M5R 43 M5R H19 H19 H 0 1 N N N -22.744 -24.222 -14.145 6.104 -2.701 -0.392 H19 M5R 44 M5R H20 H20 H 0 1 N N N -24.553 -24.383 -12.483 7.976 -0.551 -1.482 H20 M5R 45 M5R H21 H21 H 0 1 N N N -25.497 -25.401 -13.622 7.701 -2.152 -2.208 H21 M5R 46 M5R H22 H22 H 0 1 N N N -23.931 -25.995 -12.973 6.376 -0.965 -2.141 H22 M5R 47 M5R H23 H23 H 0 1 N N N -23.171 -26.377 -15.269 7.757 -2.833 1.451 H23 M5R 48 M5R H24 H24 H 0 1 N N N -24.669 -25.695 -15.987 8.507 -3.243 -0.110 H24 M5R 49 M5R H25 H25 H 0 1 N N N -23.069 -25.010 -16.429 8.783 -1.641 0.617 H25 M5R 50 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal M5R N C4 SING N N 1 M5R N C5 SING N N 2 M5R C6 C5 SING N N 3 M5R C6 C7 SING N N 4 M5R C4 C3 SING N N 5 M5R C C1 SING N N 6 M5R C5 C16 SING N N 7 M5R C3 C1 SING N N 8 M5R C7 C8 SING N N 9 M5R C1 C2 SING N N 10 M5R C16 C15 SING N N 11 M5R C8 C15 DOUB Y N 12 M5R C8 C9 SING Y N 13 M5R C15 C14 SING Y N 14 M5R C9 C10 DOUB Y N 15 M5R C14 F SING N N 16 M5R C14 C11 DOUB Y N 17 M5R C10 C11 SING Y N 18 M5R C10 O SING N N 19 M5R C11 N1 SING N N 20 M5R C12 N1 SING N N 21 M5R C12 C13 SING N N 22 M5R N1 S SING N N 23 M5R C13 O1 DOUB N N 24 M5R C13 N2 SING N N 25 M5R S O2 DOUB N N 26 M5R S O3 DOUB N N 27 M5R S N2 SING N N 28 M5R C4 H1 SING N N 29 M5R C4 H2 SING N N 30 M5R C5 H3 SING N N 31 M5R C6 H4 SING N N 32 M5R C6 H5 SING N N 33 M5R C7 H6 SING N N 34 M5R C7 H7 SING N N 35 M5R N2 H8 SING N N 36 M5R C12 H9 SING N N 37 M5R C12 H10 SING N N 38 M5R O H11 SING N N 39 M5R C9 H12 SING N N 40 M5R C16 H13 SING N N 41 M5R C16 H14 SING N N 42 M5R N H15 SING N N 43 M5R C3 H17 SING N N 44 M5R C3 H18 SING N N 45 M5R C1 H19 SING N N 46 M5R C2 H20 SING N N 47 M5R C2 H21 SING N N 48 M5R C2 H22 SING N N 49 M5R C H23 SING N N 50 M5R C H24 SING N N 51 M5R C H25 SING N N 52 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor M5R SMILES ACDLabs 12.01 "O=C1CN(c2c(F)c3CC(NCCC(C)C)CCc3cc2O)S(=O)(=O)N1" M5R InChI InChI 1.03 "InChI=1S/C17H24FN3O4S/c1-10(2)5-6-19-12-4-3-11-7-14(22)17(16(18)13(11)8-12)21-9-15(23)20-26(21,24)25/h7,10,12,19,22H,3-6,8-9H2,1-2H3,(H,20,23)/t12-/m1/s1" M5R InChIKey InChI 1.03 DVFCRTGTEXUFIN-GFCCVEGCSA-N M5R SMILES_CANONICAL CACTVS 3.385 "CC(C)CCN[C@@H]1CCc2cc(O)c(N3CC(=O)N[S]3(=O)=O)c(F)c2C1" M5R SMILES CACTVS 3.385 "CC(C)CCN[CH]1CCc2cc(O)c(N3CC(=O)N[S]3(=O)=O)c(F)c2C1" M5R SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)CCN[C@@H]1CCc2cc(c(c(c2C1)F)N3CC(=O)NS3(=O)=O)O" M5R SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CCNC1CCc2cc(c(c(c2C1)F)N3CC(=O)NS3(=O)=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier M5R "SYSTEMATIC NAME" ACDLabs 12.01 "5-{(7R)-1-fluoro-3-hydroxy-7-[(3-methylbutyl)amino]-5,6,7,8-tetrahydronaphthalen-2-yl}-1lambda~6~,2,5-thiadiazolidine-1,1,3-trione" M5R "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "5-[(7~{R})-1-fluoranyl-7-(3-methylbutylamino)-3-oxidanyl-5,6,7,8-tetrahydronaphthalen-2-yl]-1,1-bis(oxidanylidene)-1,2,5-thiadiazolidin-3-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site M5R "Create component" 2022-03-14 RCSB M5R "Initial release" 2023-07-26 RCSB #