data_M7P # _chem_comp.id M7P _chem_comp.name 7-O-phosphono-D-glycero-alpha-D-manno-heptopyranose _chem_comp.type "D-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C7 H15 O10 P" _chem_comp.mon_nstd_parent_comp_id 289 _chem_comp.pdbx_synonyms ;D-GLYCERO-D-MANNOPYRANOSE-7-PHOSPHATE; 7-O-phosphono-D-glycero-alpha-D-manno-heptose; 7-O-phosphono-D-glycero-D-manno-heptose; 7-O-phosphono-D-glycero-manno-heptose ; _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2004-08-20 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 290.162 _chem_comp.one_letter_code ? _chem_comp.three_letter_code M7P _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1X92 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 M7P D-GLYCERO-D-MANNOPYRANOSE-7-PHOSPHATE PDB ? 2 M7P 7-O-phosphono-D-glycero-alpha-D-manno-heptose PDB ? 3 M7P 7-O-phosphono-D-glycero-D-manno-heptose PDB ? 4 M7P 7-O-phosphono-D-glycero-manno-heptose PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal M7P O10 O10 O 0 1 N N N 40.627 -31.535 0.713 5.204 0.515 0.563 O10 M7P 1 M7P P P P 0 1 N N N 39.029 -31.398 0.757 3.845 -0.170 0.040 P M7P 2 M7P O8 O8 O 0 1 N N N 38.604 -30.838 -0.689 3.865 -0.241 -1.438 O8 M7P 3 M7P O9 O9 O 0 1 N N N 38.583 -30.506 1.852 3.725 -1.656 0.647 O9 M7P 4 M7P O7 O7 O 0 1 N N N 38.329 -32.854 0.849 2.583 0.708 0.518 O7 M7P 5 M7P C7 C7 C 0 1 N N N 38.500 -33.756 -0.247 1.422 0.120 -0.073 C7 M7P 6 M7P C6 C6 C 0 1 N N R 37.767 -35.097 -0.164 0.181 0.911 0.344 C6 M7P 7 M7P O6 O6 O 0 1 N N N 37.790 -35.620 1.166 0.253 2.231 -0.199 O6 M7P 8 M7P C5 C5 C 0 1 N N R 36.319 -35.090 -0.669 -1.072 0.209 -0.185 C5 M7P 9 M7P O5 O5 O 0 1 N N N 35.436 -34.594 0.346 -1.141 -1.109 0.355 O5 M7P 10 M7P C1 C1 C 0 1 N N S 34.055 -34.907 0.082 -2.214 -1.787 -0.296 C1 M7P 11 M7P O1 O1 O 0 1 N Y N 33.865 -36.317 0.183 -2.050 -1.684 -1.712 O1 M7P 12 M7P C2 C2 C 0 1 N N S 33.572 -34.461 -1.302 -3.548 -1.155 0.108 C2 M7P 13 M7P O2 O2 O 0 1 N N N 33.381 -33.043 -1.280 -3.702 -1.230 1.526 O2 M7P 14 M7P C3 C3 C 0 1 N N S 34.595 -34.882 -2.363 -3.560 0.313 -0.335 C3 M7P 15 M7P O3 O3 O 0 1 N N N 34.221 -34.451 -3.675 -4.735 0.955 0.165 O3 M7P 16 M7P C4 C4 C 0 1 N N S 35.996 -34.391 -1.991 -2.313 1.004 0.230 C4 M7P 17 M7P O4 O4 O 0 1 N N N 36.928 -34.759 -3.010 -2.226 2.332 -0.290 O4 M7P 18 M7P H10 H10 H 0 1 N N N 40.878 -31.866 1.567 5.934 -0.040 0.256 H10 M7P 19 M7P HO9 HO9 H 0 1 N N N 37.637 -30.425 1.878 3.715 -1.565 1.610 HO9 M7P 20 M7P H71 H71 H 0 1 N N N 39.588 -33.936 -0.414 1.326 -0.912 0.266 H71 M7P 21 M7P H72 H72 H 0 1 N N N 38.228 -33.242 -1.198 1.518 0.138 -1.158 H72 M7P 22 M7P H6 H6 H 0 1 N N N 38.339 -35.753 -0.861 0.134 0.967 1.431 H6 M7P 23 M7P HO6 HO6 H 0 1 N Y N 37.335 -36.452 1.218 0.293 2.136 -1.160 HO6 M7P 24 M7P H5 H5 H 0 1 N N N 36.161 -36.169 -0.903 -1.024 0.153 -1.272 H5 M7P 25 M7P H1 H1 H 0 1 N N N 33.459 -34.346 0.840 -2.208 -2.837 -0.006 H1 M7P 26 M7P HO1 HO1 H 0 1 N Y N 32.954 -36.523 0.009 -1.202 -2.096 -1.926 HO1 M7P 27 M7P H2 H2 H 0 1 N N N 32.602 -34.947 -1.561 -4.365 -1.688 -0.377 H2 M7P 28 M7P HO2 HO2 H 0 1 N Y N 33.082 -32.766 -2.138 -3.683 -2.168 1.760 HO2 M7P 29 M7P H3 H3 H 0 1 N N N 34.612 -35.997 -2.386 -3.548 0.367 -1.423 H3 M7P 30 M7P HO3 HO3 H 0 1 N Y N 34.855 -34.712 -4.333 -5.491 0.480 -0.205 HO3 M7P 31 M7P H4 H4 H 0 1 N N N 36.052 -33.282 -1.892 -2.377 1.041 1.317 H4 M7P 32 M7P HO4 HO4 H 0 1 N Y N 36.727 -34.325 -3.831 -3.029 2.794 -0.013 HO4 M7P 33 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal M7P O10 P SING N N 1 M7P O10 H10 SING N N 2 M7P P O8 DOUB N N 3 M7P P O9 SING N N 4 M7P P O7 SING N N 5 M7P O9 HO9 SING N N 6 M7P O7 C7 SING N N 7 M7P C7 C6 SING N N 8 M7P C7 H71 SING N N 9 M7P C7 H72 SING N N 10 M7P C6 O6 SING N N 11 M7P C6 C5 SING N N 12 M7P C6 H6 SING N N 13 M7P O6 HO6 SING N N 14 M7P C5 O5 SING N N 15 M7P C5 C4 SING N N 16 M7P C5 H5 SING N N 17 M7P O5 C1 SING N N 18 M7P C1 O1 SING N N 19 M7P C1 C2 SING N N 20 M7P C1 H1 SING N N 21 M7P O1 HO1 SING N N 22 M7P C2 O2 SING N N 23 M7P C2 C3 SING N N 24 M7P C2 H2 SING N N 25 M7P O2 HO2 SING N N 26 M7P C3 O3 SING N N 27 M7P C3 C4 SING N N 28 M7P C3 H3 SING N N 29 M7P O3 HO3 SING N N 30 M7P C4 O4 SING N N 31 M7P C4 H4 SING N N 32 M7P O4 HO4 SING N N 33 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor M7P SMILES ACDLabs 10.04 "O=P(O)(O)OCC(O)C1OC(O)C(O)C(O)C1O" M7P SMILES_CANONICAL CACTVS 3.341 "O[C@H](CO[P](O)(O)=O)[C@H]1O[C@H](O)[C@@H](O)[C@@H](O)[C@@H]1O" M7P SMILES CACTVS 3.341 "O[CH](CO[P](O)(O)=O)[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O" M7P SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C([C@H]([C@@H]1[C@H]([C@@H]([C@@H]([C@H](O1)O)O)O)O)O)OP(=O)(O)O" M7P SMILES "OpenEye OEToolkits" 1.5.0 "C(C(C1C(C(C(C(O1)O)O)O)O)O)OP(=O)(O)O" M7P InChI InChI 1.03 "InChI=1S/C7H15O10P/c8-2(1-16-18(13,14)15)6-4(10)3(9)5(11)7(12)17-6/h2-12H,1H2,(H2,13,14,15)/t2-,3+,4+,5+,6-,7+/m1/s1" M7P InChIKey InChI 1.03 SDADNVAZGVDAIM-QTNLNCNHSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier M7P "SYSTEMATIC NAME" ACDLabs 10.04 7-O-phosphono-D-glycero-alpha-D-manno-heptopyranose M7P "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R)-2-hydroxy-2-[(2R,3S,4S,5S,6S)-3,4,5,6-tetrahydroxyoxan-2-yl]ethyl] dihydrogen phosphate" # _pdbx_chem_comp_related.comp_id M7P _pdbx_chem_comp_related.related_comp_id 289 _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 M7P C1 289 C1 "Carbohydrate core" 2 M7P C2 289 C2 "Carbohydrate core" 3 M7P C3 289 C3 "Carbohydrate core" 4 M7P C4 289 C4 "Carbohydrate core" 5 M7P C5 289 C5 "Carbohydrate core" 6 M7P C6 289 C6 "Carbohydrate core" 7 M7P C7 289 C7 "Carbohydrate core" 8 M7P O1 289 O1 "Carbohydrate core" 9 M7P O2 289 O2 "Carbohydrate core" 10 M7P O3 289 O3 "Carbohydrate core" 11 M7P O4 289 O4 "Carbohydrate core" 12 M7P O5 289 O5 "Carbohydrate core" 13 M7P O6 289 O6 "Carbohydrate core" 14 M7P O7 289 O7 "Carbohydrate core" 15 M7P H1 289 H1 "Carbohydrate core" 16 M7P H2 289 H2 "Carbohydrate core" 17 M7P H3 289 H3 "Carbohydrate core" 18 M7P H4 289 H4 "Carbohydrate core" 19 M7P H5 289 H5 "Carbohydrate core" 20 M7P H6 289 H6 "Carbohydrate core" 21 M7P H71 289 H71 "Carbohydrate core" 22 M7P H72 289 H72 "Carbohydrate core" 23 M7P HO1 289 HO1 "Carbohydrate core" 24 M7P HO2 289 HO2 "Carbohydrate core" 25 M7P HO3 289 HO3 "Carbohydrate core" 26 M7P HO4 289 HO4 "Carbohydrate core" 27 M7P HO6 289 HO6 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support M7P "CARBOHYDRATE ISOMER" D PDB ? M7P "CARBOHYDRATE RING" pyranose PDB ? M7P "CARBOHYDRATE ANOMER" alpha PDB ? M7P "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site M7P "Create component" 2004-08-20 RCSB M7P "Modify descriptor" 2011-06-04 RCSB M7P "Other modification" 2020-07-03 RCSB M7P "Modify parent residue" 2020-07-17 RCSB M7P "Modify name" 2020-07-17 RCSB M7P "Modify synonyms" 2020-07-17 RCSB M7P "Modify internal type" 2020-07-17 RCSB M7P "Modify linking type" 2020-07-17 RCSB M7P "Modify leaving atom flag" 2020-07-17 RCSB ##