data_MB5 # _chem_comp.id MB5 _chem_comp.name "(5aS,12aS,13aS)-9-chloro-12,12-dimethyl-2,3,11,12,12a,13-hexahydro-1H,5H,6H-5a,13a-(epiminomethano)indolizino[7,6-b]carbazol-14-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H24 Cl N3 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "malbrancheamide B" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-07-17 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 369.888 _chem_comp.one_letter_code ? _chem_comp.three_letter_code MB5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5WGW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal MB5 N N1 N 0 1 N N N 65.746 22.837 89.114 -2.473 1.675 1.010 N MB5 1 MB5 C C1 C 0 1 N N N 64.889 22.852 90.142 -3.736 1.202 0.737 C MB5 2 MB5 O O1 O 0 1 N N N 65.162 23.315 91.240 -4.755 1.808 0.989 O MB5 3 MB5 C1 C2 C 0 1 N N S 63.538 22.227 89.791 -3.704 -0.167 0.084 C1 MB5 4 MB5 C10 C3 C 0 1 Y N N 66.263 21.280 81.499 5.125 0.322 -0.227 C10 MB5 5 MB5 C11 C4 C 0 1 Y N N 65.566 20.326 82.217 4.359 -0.832 -0.224 C11 MB5 6 MB5 C12 C5 C 0 1 Y N N 65.514 20.464 83.598 2.993 -0.681 0.009 C12 MB5 7 MB5 C13 C6 C 0 1 Y N N 65.102 20.263 85.794 0.792 -0.932 0.332 C13 MB5 8 MB5 C14 C7 C 0 1 N N N 64.526 19.764 87.100 -0.569 -1.571 0.480 C14 MB5 9 MB5 C15 C8 C 0 1 N N N 63.011 19.607 86.896 -1.115 -1.936 -0.901 C15 MB5 10 MB5 C16 C9 C 0 1 N N N 65.102 18.372 87.403 -0.449 -2.836 1.332 C16 MB5 11 MB5 C17 C10 C 0 1 N N N 63.998 23.040 87.496 -1.697 0.614 -1.035 C17 MB5 12 MB5 C18 C11 C 0 1 N N N 62.549 24.186 89.180 -3.933 0.571 -2.110 C18 MB5 13 MB5 C19 C12 C 0 1 N N N 61.754 23.737 90.392 -5.285 -0.095 -1.756 C19 MB5 14 MB5 C2 C13 C 0 1 N N N 63.819 20.762 89.394 -2.957 -1.129 0.994 C2 MB5 15 MB5 C20 C14 C 0 1 N N N 62.450 22.458 90.852 -5.112 -0.606 -0.303 C20 MB5 16 MB5 C3 C15 C 0 1 N N S 64.859 20.762 88.257 -1.523 -0.581 1.164 C3 MB5 17 MB5 C4 C16 C 0 1 N N S 65.249 22.233 87.871 -1.423 0.785 0.463 C4 MB5 18 MB5 C5 C17 C 0 1 N N N 66.359 22.199 86.812 -0.056 1.418 0.699 C5 MB5 19 MB5 C6 C18 C 0 1 Y N N 65.887 21.372 85.657 1.017 0.395 0.430 C6 MB5 20 MB5 C7 C19 C 0 1 Y N N 66.155 21.529 84.256 2.436 0.605 0.228 C7 MB5 21 MB5 C8 C20 C 0 1 Y N N 66.846 22.463 83.493 3.233 1.753 0.220 C8 MB5 22 MB5 C9 C21 C 0 1 Y N N 66.900 22.343 82.115 4.575 1.576 -0.010 C9 MB5 23 MB5 N1 N2 N 0 1 Y N N 64.875 19.696 84.559 1.972 -1.584 0.081 N1 MB5 24 MB5 N2 N3 N 0 1 N N N 63.033 22.933 88.592 -2.969 -0.074 -1.202 N2 MB5 25 MB5 CL CL1 CL 0 0 N N N 66.334 21.141 79.765 6.833 0.194 -0.512 CL MB5 26 MB5 H1 H1 H 0 1 N N N 66.669 23.214 89.188 -2.292 2.494 1.497 H1 MB5 27 MB5 H2 H2 H 0 1 N N N 65.078 19.500 81.720 4.799 -1.803 -0.394 H2 MB5 28 MB5 H3 H3 H 0 1 N N N 62.551 19.244 87.827 -0.936 -2.993 -1.096 H3 MB5 29 MB5 H4 H4 H 0 1 N N N 62.575 20.580 86.627 -2.186 -1.737 -0.933 H4 MB5 30 MB5 H5 H5 H 0 1 N N N 62.823 18.885 86.088 -0.612 -1.336 -1.661 H5 MB5 31 MB5 H6 H6 H 0 1 N N N 64.688 18.002 88.352 -0.061 -2.576 2.317 H6 MB5 32 MB5 H7 H7 H 0 1 N N N 64.834 17.680 86.591 -1.431 -3.297 1.439 H7 MB5 33 MB5 H8 H8 H 0 1 N N N 66.197 18.438 87.482 0.230 -3.538 0.847 H8 MB5 34 MB5 H9 H9 H 0 1 N N N 64.269 24.095 87.341 -1.746 1.593 -1.512 H9 MB5 35 MB5 H10 H10 H 0 1 N N N 63.558 22.635 86.573 -0.900 0.024 -1.488 H10 MB5 36 MB5 H11 H11 H 0 1 N N N 63.390 24.828 89.480 -3.670 0.374 -3.149 H11 MB5 37 MB5 H12 H12 H 0 1 N N N 61.908 24.729 88.470 -3.974 1.644 -1.923 H12 MB5 38 MB5 H13 H13 H 0 1 N N N 61.784 24.502 91.182 -6.092 0.636 -1.808 H13 MB5 39 MB5 H14 H14 H 0 1 N N N 60.708 23.534 90.118 -5.485 -0.928 -2.430 H14 MB5 40 MB5 H15 H15 H 0 1 N N N 62.890 20.285 89.049 -3.451 -1.181 1.964 H15 MB5 41 MB5 H16 H16 H 0 1 N N N 64.214 20.211 90.260 -2.925 -2.120 0.541 H16 MB5 42 MB5 H17 H17 H 0 1 N N N 61.743 21.615 90.878 -5.196 -1.692 -0.269 H17 MB5 43 MB5 H18 H18 H 0 1 N N N 62.897 22.592 91.848 -5.850 -0.144 0.354 H18 MB5 44 MB5 H19 H19 H 0 1 N N N 65.770 20.352 88.716 -1.277 -0.494 2.223 H19 MB5 45 MB5 H20 H20 H 0 1 N N N 67.268 21.753 87.241 0.073 2.266 0.027 H20 MB5 46 MB5 H21 H21 H 0 1 N N N 66.578 23.222 86.471 0.015 1.758 1.732 H21 MB5 47 MB5 H22 H22 H 0 1 N N N 67.345 23.289 83.979 2.813 2.734 0.387 H22 MB5 48 MB5 H23 H23 H 0 1 N N N 67.435 23.073 81.525 5.222 2.440 -0.023 H23 MB5 49 MB5 H24 H24 H 0 1 N N N 64.339 18.870 84.385 2.067 -2.543 -0.030 H24 MB5 50 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal MB5 CL C10 SING N N 1 MB5 C10 C9 DOUB Y N 2 MB5 C10 C11 SING Y N 3 MB5 C9 C8 SING Y N 4 MB5 C11 C12 DOUB Y N 5 MB5 C8 C7 DOUB Y N 6 MB5 C12 C7 SING Y N 7 MB5 C12 N1 SING Y N 8 MB5 C7 C6 SING Y N 9 MB5 N1 C13 SING Y N 10 MB5 C6 C13 DOUB Y N 11 MB5 C6 C5 SING N N 12 MB5 C13 C14 SING N N 13 MB5 C5 C4 SING N N 14 MB5 C15 C14 SING N N 15 MB5 C14 C16 SING N N 16 MB5 C14 C3 SING N N 17 MB5 C17 C4 SING N N 18 MB5 C17 N2 SING N N 19 MB5 C4 C3 SING N N 20 MB5 C4 N SING N N 21 MB5 C3 C2 SING N N 22 MB5 N2 C18 SING N N 23 MB5 N2 C1 SING N N 24 MB5 N C SING N N 25 MB5 C18 C19 SING N N 26 MB5 C2 C1 SING N N 27 MB5 C1 C SING N N 28 MB5 C1 C20 SING N N 29 MB5 C O DOUB N N 30 MB5 C19 C20 SING N N 31 MB5 N H1 SING N N 32 MB5 C11 H2 SING N N 33 MB5 C15 H3 SING N N 34 MB5 C15 H4 SING N N 35 MB5 C15 H5 SING N N 36 MB5 C16 H6 SING N N 37 MB5 C16 H7 SING N N 38 MB5 C16 H8 SING N N 39 MB5 C17 H9 SING N N 40 MB5 C17 H10 SING N N 41 MB5 C18 H11 SING N N 42 MB5 C18 H12 SING N N 43 MB5 C19 H13 SING N N 44 MB5 C19 H14 SING N N 45 MB5 C2 H15 SING N N 46 MB5 C2 H16 SING N N 47 MB5 C20 H17 SING N N 48 MB5 C20 H18 SING N N 49 MB5 C3 H19 SING N N 50 MB5 C5 H20 SING N N 51 MB5 C5 H21 SING N N 52 MB5 C8 H22 SING N N 53 MB5 C9 H23 SING N N 54 MB5 N1 H24 SING N N 55 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor MB5 SMILES ACDLabs 12.01 "N2C(=O)C61CCCN1CC23C(C(c5c(C3)c4c(cc(cc4)Cl)n5)(C)C)C6" MB5 InChI InChI 1.03 "InChI=1S/C21H24ClN3O/c1-19(2)16-10-21-6-3-7-25(21)11-20(16,24-18(21)26)9-14-13-5-4-12(22)8-15(13)23-17(14)19/h4-5,8,16,23H,3,6-7,9-11H2,1-2H3,(H,24,26)/t16-,20+,21-/m0/s1" MB5 InChIKey InChI 1.03 DXPVAKSJZFQGSS-DQLDELGASA-N MB5 SMILES_CANONICAL CACTVS 3.385 "CC1(C)[C@@H]2C[C@]34CCCN3C[C@@]2(Cc5c6ccc(Cl)cc6[nH]c15)NC4=O" MB5 SMILES CACTVS 3.385 "CC1(C)[CH]2C[C]34CCCN3C[C]2(Cc5c6ccc(Cl)cc6[nH]c15)NC4=O" MB5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC1(c2c(c3ccc(cc3[nH]2)Cl)C[C@]45[C@H]1C[C@@]6(CCCN6C4)C(=O)N5)C" MB5 SMILES "OpenEye OEToolkits" 2.0.6 "CC1(c2c(c3ccc(cc3[nH]2)Cl)CC45C1CC6(CCCN6C4)C(=O)N5)C" # _pdbx_chem_comp_identifier.comp_id MB5 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program ACDLabs _pdbx_chem_comp_identifier.program_version 12.01 _pdbx_chem_comp_identifier.identifier "(5aS,12aS,13aS)-9-chloro-12,12-dimethyl-2,3,11,12,12a,13-hexahydro-1H,5H,6H-5a,13a-(epiminomethano)indolizino[7,6-b]carbazol-14-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site MB5 "Create component" 2017-07-17 RCSB MB5 "Initial release" 2017-08-16 RCSB MB5 "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id MB5 _pdbx_chem_comp_synonyms.name "malbrancheamide B" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##