data_MC5 # _chem_comp.id MC5 _chem_comp.name "(5S)-5-({6-[(2-fluorobenzyl)oxy]naphthalen-2-yl}methyl)-1,3-thiazolidine-2,4-dione" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H16 F N O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms Netoglitazone _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-06-22 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 381.420 _chem_comp.one_letter_code ? _chem_comp.three_letter_code MC5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3B0Q _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal MC5 F F F 0 1 N N N -19.323 18.064 -8.649 6.358 2.397 0.668 F MC5 1 MC5 N N N 0 1 N N N -19.863 19.354 -20.512 -6.888 0.805 -0.198 N MC5 2 MC5 S S S 0 1 N N N -20.244 19.593 -18.056 -4.437 1.174 -0.664 S MC5 3 MC5 C1 C1 C 0 1 Y N N -16.849 17.246 -14.878 -0.567 -0.264 0.647 C1 MC5 4 MC5 O1 O1 O 0 1 N N N -15.922 17.120 -10.829 3.487 -0.602 -0.093 O1 MC5 5 MC5 C2 C2 C 0 1 Y N N -17.879 17.117 -13.950 -0.043 -1.459 0.094 C2 MC5 6 MC5 O2 O2 O 0 1 N N N -17.753 18.533 -20.642 -7.141 -1.387 0.120 O2 MC5 7 MC5 C3 C3 C 0 1 Y N N -15.531 17.320 -14.455 0.302 0.802 0.939 C3 MC5 8 MC5 O3 O3 O 0 1 N N N -21.855 20.224 -19.901 -6.395 2.996 -0.558 O3 MC5 9 MC5 C4 C4 C 0 1 Y N N -17.146 17.287 -16.231 -1.947 -0.168 0.897 C4 MC5 10 MC5 C5 C5 C 0 1 Y N N -18.468 17.202 -16.651 -2.759 -1.220 0.606 C5 MC5 11 MC5 C6 C6 C 0 1 Y N N -17.589 17.075 -12.595 1.336 -1.559 -0.151 C6 MC5 12 MC5 C7 C7 C 0 1 Y N N -16.263 17.154 -12.160 2.152 -0.504 0.145 C7 MC5 13 MC5 C8 C8 C 0 1 Y N N -19.204 17.037 -14.375 -0.914 -2.523 -0.197 C8 MC5 14 MC5 C9 C9 C 0 1 Y N N -15.235 17.275 -13.095 1.633 0.674 0.690 C9 MC5 15 MC5 C10 C10 C 0 1 Y N N -16.888 21.116 -9.971 7.405 -1.246 -0.936 C10 MC5 16 MC5 C11 C11 C 0 1 Y N N -19.502 17.086 -15.729 -2.244 -2.396 0.063 C11 MC5 17 MC5 C12 C12 C 0 1 N N N -18.785 17.276 -18.112 -4.238 -1.113 0.876 C12 MC5 18 MC5 C13 C13 C 0 1 N N S -18.762 18.750 -18.507 -4.943 -0.552 -0.361 C13 MC5 19 MC5 C14 C14 C 0 1 N N N -18.734 18.856 -20.001 -6.432 -0.434 -0.120 C14 MC5 20 MC5 C15 C15 C 0 1 Y N N -18.124 21.403 -9.402 8.376 -0.290 -0.701 C15 MC5 21 MC5 C16 C16 C 0 1 N N N -20.760 19.777 -19.622 -6.073 1.828 -0.466 C16 MC5 22 MC5 C17 C17 C 0 1 Y N N -18.945 20.371 -8.961 8.025 0.933 -0.163 C17 MC5 23 MC5 C18 C18 C 0 1 N N N -16.857 17.327 -9.769 4.289 0.533 0.237 C18 MC5 24 MC5 C19 C19 C 0 1 Y N N -17.297 18.766 -9.659 5.731 0.243 -0.094 C19 MC5 25 MC5 C20 C20 C 0 1 Y N N -18.526 19.054 -9.086 6.702 1.202 0.142 C20 MC5 26 MC5 C21 C21 C 0 1 Y N N -16.475 19.803 -10.099 6.083 -0.980 -0.632 C21 MC5 27 MC5 HN HN H 0 1 N N N -20.025 19.406 -21.497 -7.833 0.973 -0.061 HN MC5 28 MC5 H3 H3 H 0 1 N N N -14.735 17.412 -15.179 -0.085 1.718 1.360 H3 MC5 29 MC5 H4 H4 H 0 1 N N N -16.352 17.385 -16.957 -2.360 0.737 1.318 H4 MC5 30 MC5 H6 H6 H 0 1 N N N -18.388 16.981 -11.875 1.749 -2.464 -0.572 H6 MC5 31 MC5 H8 H8 H 0 1 N N N -19.999 16.937 -13.650 -0.529 -3.440 -0.619 H8 MC5 32 MC5 H9 H9 H 0 1 N N N -14.209 17.334 -12.764 2.298 1.494 0.916 H9 MC5 33 MC5 H10 H10 H 0 1 N N N -16.251 21.918 -10.313 7.680 -2.201 -1.360 H10 MC5 34 MC5 H11 H11 H 0 1 N N N -20.528 17.035 -16.064 -2.910 -3.216 -0.158 H11 MC5 35 MC5 H12 H12 H 0 1 N N N -18.037 16.716 -18.692 -4.638 -2.101 1.106 H12 MC5 36 MC5 H12A H12A H 0 0 N N N -19.778 16.846 -18.308 -4.405 -0.447 1.723 H12A MC5 37 MC5 H13 H13 H 0 1 N N N -17.887 19.186 -18.002 -4.739 -1.173 -1.234 H13 MC5 38 MC5 H15 H15 H 0 1 N N N -18.447 22.429 -9.302 9.408 -0.500 -0.939 H15 MC5 39 MC5 H17 H17 H 0 1 N N N -19.906 20.594 -8.522 8.784 1.680 0.021 H17 MC5 40 MC5 H18 H18 H 0 1 N N N -17.744 16.705 -9.960 3.952 1.396 -0.337 H18 MC5 41 MC5 H18A H18A H 0 0 N N N -16.380 17.035 -8.822 4.196 0.746 1.302 H18A MC5 42 MC5 H21 H21 H 0 1 N N N -15.515 19.580 -10.540 5.326 -1.727 -0.816 H21 MC5 43 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal MC5 F C20 SING N N 1 MC5 N C14 SING N N 2 MC5 N C16 SING N N 3 MC5 S C13 SING N N 4 MC5 S C16 SING N N 5 MC5 C1 C2 DOUB Y N 6 MC5 C1 C3 SING Y N 7 MC5 C1 C4 SING Y N 8 MC5 O1 C7 SING N N 9 MC5 O1 C18 SING N N 10 MC5 C2 C6 SING Y N 11 MC5 C2 C8 SING Y N 12 MC5 O2 C14 DOUB N N 13 MC5 C3 C9 DOUB Y N 14 MC5 O3 C16 DOUB N N 15 MC5 C4 C5 DOUB Y N 16 MC5 C5 C11 SING Y N 17 MC5 C5 C12 SING N N 18 MC5 C6 C7 DOUB Y N 19 MC5 C7 C9 SING Y N 20 MC5 C8 C11 DOUB Y N 21 MC5 C10 C15 DOUB Y N 22 MC5 C10 C21 SING Y N 23 MC5 C12 C13 SING N N 24 MC5 C13 C14 SING N N 25 MC5 C15 C17 SING Y N 26 MC5 C17 C20 DOUB Y N 27 MC5 C18 C19 SING N N 28 MC5 C19 C20 SING Y N 29 MC5 C19 C21 DOUB Y N 30 MC5 N HN SING N N 31 MC5 C3 H3 SING N N 32 MC5 C4 H4 SING N N 33 MC5 C6 H6 SING N N 34 MC5 C8 H8 SING N N 35 MC5 C9 H9 SING N N 36 MC5 C10 H10 SING N N 37 MC5 C11 H11 SING N N 38 MC5 C12 H12 SING N N 39 MC5 C12 H12A SING N N 40 MC5 C13 H13 SING N N 41 MC5 C15 H15 SING N N 42 MC5 C17 H17 SING N N 43 MC5 C18 H18 SING N N 44 MC5 C18 H18A SING N N 45 MC5 C21 H21 SING N N 46 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor MC5 SMILES ACDLabs 12.01 "Fc1ccccc1COc3ccc2cc(ccc2c3)CC4SC(=O)NC4=O" MC5 InChI InChI 1.03 "InChI=1S/C21H16FNO3S/c22-18-4-2-1-3-16(18)12-26-17-8-7-14-9-13(5-6-15(14)11-17)10-19-20(24)23-21(25)27-19/h1-9,11,19H,10,12H2,(H,23,24,25)/t19-/m0/s1" MC5 InChIKey InChI 1.03 PKWDZWYVIHVNKS-IBGZPJMESA-N MC5 SMILES_CANONICAL CACTVS 3.370 "Fc1ccccc1COc2ccc3cc(C[C@@H]4SC(=O)NC4=O)ccc3c2" MC5 SMILES CACTVS 3.370 "Fc1ccccc1COc2ccc3cc(C[CH]4SC(=O)NC4=O)ccc3c2" MC5 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "c1ccc(c(c1)COc2ccc3cc(ccc3c2)C[C@H]4C(=O)NC(=O)S4)F" MC5 SMILES "OpenEye OEToolkits" 1.7.2 "c1ccc(c(c1)COc2ccc3cc(ccc3c2)CC4C(=O)NC(=O)S4)F" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MC5 "SYSTEMATIC NAME" ACDLabs 12.01 "(5S)-5-({6-[(2-fluorobenzyl)oxy]naphthalen-2-yl}methyl)-1,3-thiazolidine-2,4-dione" MC5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "(5S)-5-[[6-[(2-fluorophenyl)methoxy]naphthalen-2-yl]methyl]-1,3-thiazolidine-2,4-dione" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site MC5 "Create component" 2011-06-22 PDBJ MC5 "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id MC5 _pdbx_chem_comp_synonyms.name Netoglitazone _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##