data_MFB # _chem_comp.id MFB _chem_comp.name "methyl beta-L-fucopyranoside" _chem_comp.type L-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C7 H14 O5" _chem_comp.mon_nstd_parent_comp_id FUL _chem_comp.pdbx_synonyms ;BETA-L-METHYL-FUCOSE; methyl 6-deoxy-beta-L-galactopyranoside; methyl beta-L-fucoside; methyl L-fucoside; methyl fucoside ; _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 178.183 _chem_comp.one_letter_code ? _chem_comp.three_letter_code MFB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1RDJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 MFB BETA-L-METHYL-FUCOSE PDB ? 2 MFB "methyl 6-deoxy-beta-L-galactopyranoside" PDB ? 3 MFB "methyl beta-L-fucoside" PDB ? 4 MFB "methyl L-fucoside" PDB ? 5 MFB "methyl fucoside" PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal MFB C1 C1 C 0 1 N N S 3.887 47.767 0.698 1.688 -2.499 2.445 C1 MFB 1 MFB C2 C2 C 0 1 N N S 4.308 46.683 1.684 0.540 -3.041 1.590 C2 MFB 2 MFB C3 C3 C 0 1 N N R 3.083 45.935 2.183 -0.294 -1.894 1.016 C3 MFB 3 MFB C4 C4 C 0 1 N N S 2.319 45.352 0.993 0.597 -0.857 0.333 C4 MFB 4 MFB C5 C5 C 0 1 N N S 1.971 46.480 0.014 1.705 -0.411 1.292 C5 MFB 5 MFB C6 C6 C 0 1 N N N 1.293 45.990 -1.252 2.677 0.567 0.642 C6 MFB 6 MFB O1 O1 O 0 1 N N N 5.013 48.477 0.265 2.520 -3.574 2.881 O1 MFB 7 MFB O2 O2 O 0 1 N N N 4.974 47.266 2.779 -0.308 -3.854 2.399 O2 MFB 8 MFB O3 O3 O 0 1 N N N 3.491 44.890 3.051 -1.238 -2.396 0.074 O3 MFB 9 MFB O4 O4 O 0 1 N N N 3.130 44.381 0.343 1.194 -1.429 -0.833 O4 MFB 10 MFB O5 O5 O 0 1 N N N 3.175 47.176 -0.383 2.465 -1.548 1.719 O5 MFB 11 MFB CM CM C 0 1 N N N ? ? ? 3.596 -3.103 3.677 CM MFB 12 MFB H1 H1 H 0 1 N N N 3.204 48.495 1.194 1.305 -2.025 3.357 H1 MFB 13 MFB H2 H2 H 0 1 N N N 4.993 45.971 1.167 0.915 -3.676 0.778 H2 MFB 14 MFB H3 H3 H 0 1 N N N 2.416 46.636 2.737 -0.869 -1.415 1.818 H3 MFB 15 MFB H4 H4 H 0 1 N N N 1.379 44.867 1.347 -0.001 -0.000 0.001 H4 MFB 16 MFB H5 H5 H 0 1 N N N 1.262 47.147 0.558 1.268 0.071 2.176 H5 MFB 17 MFB H61 H61 H 0 1 N N N 1.040 46.810 -1.963 2.999 1.326 1.361 H61 MFB 18 MFB H62 H62 H 0 1 N N N 1.908 45.207 -1.753 3.564 0.042 0.275 H62 MFB 19 MFB H63 H63 H 0 1 N N N 0.388 45.385 -1.007 2.203 1.074 -0.204 H63 MFB 20 MFB HO2 HO2 H 0 1 N Y N 5.236 46.590 3.393 -1.216 -3.675 2.111 HO2 MFB 21 MFB HO3 HO3 H 0 1 N Y N 2.725 44.422 3.363 -0.737 -2.624 -0.725 HO3 MFB 22 MFB HO4 HO4 H 0 1 N Y N 2.655 44.018 -0.396 1.763 -2.148 -0.522 HO4 MFB 23 MFB HM1 HM1 H 0 1 N N N 0.896 0.565 -0.344 3.258 -2.976 4.709 HM1 MFB 24 MFB HM2 HM2 H 0 1 N N N -0.246 -0.817 0.716 3.955 -2.150 3.280 HM2 MFB 25 MFB HM3 HM3 H 0 1 N N N -0.708 -0.763 -0.396 4.406 -3.836 3.649 HM3 MFB 26 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal MFB C1 C2 SING N N 1 MFB C1 O1 SING N N 2 MFB C1 O5 SING N N 3 MFB C1 H1 SING N N 4 MFB C2 C3 SING N N 5 MFB C2 O2 SING N N 6 MFB C2 H2 SING N N 7 MFB C3 C4 SING N N 8 MFB C3 O3 SING N N 9 MFB C3 H3 SING N N 10 MFB C4 C5 SING N N 11 MFB C4 O4 SING N N 12 MFB C4 H4 SING N N 13 MFB C5 C6 SING N N 14 MFB C5 O5 SING N N 15 MFB C5 H5 SING N N 16 MFB C6 H61 SING N N 17 MFB C6 H62 SING N N 18 MFB C6 H63 SING N N 19 MFB O1 CM SING N N 20 MFB O2 HO2 SING N N 21 MFB O3 HO3 SING N N 22 MFB O4 HO4 SING N N 23 MFB CM HM1 SING N N 24 MFB CM HM2 SING N N 25 MFB CM HM3 SING N N 26 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor MFB SMILES ACDLabs 10.04 "OC1C(O)C(O)C(OC1OC)C" MFB SMILES_CANONICAL CACTVS 3.341 "CO[C@H]1O[C@@H](C)[C@@H](O)[C@@H](O)[C@@H]1O" MFB SMILES CACTVS 3.341 "CO[CH]1O[CH](C)[CH](O)[CH](O)[CH]1O" MFB SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[C@H]1[C@H]([C@H]([C@@H]([C@H](O1)OC)O)O)O" MFB SMILES "OpenEye OEToolkits" 1.5.0 "CC1C(C(C(C(O1)OC)O)O)O" MFB InChI InChI 1.03 "InChI=1S/C7H14O5/c1-3-4(8)5(9)6(10)7(11-2)12-3/h3-10H,1-2H3/t3-,4+,5+,6-,7-/m0/s1" MFB InChIKey InChI 1.03 OHWCAVRRXKJCRB-XUVCUMPTSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MFB "SYSTEMATIC NAME" ACDLabs 10.04 "methyl 6-deoxy-beta-L-galactopyranoside" MFB "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S,3S,4R,5S,6S)-2-methoxy-6-methyl-oxane-3,4,5-triol" MFB "CONDENSED IUPAC CARBOHYDRATE SYMBOL" GMML 1.0 LFucp[1Me]b MFB "COMMON NAME" GMML 1.0 1-methyl-b-L-fucopyranose MFB "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 o1-methyl-b-L-fucose # _pdbx_chem_comp_related.comp_id MFB _pdbx_chem_comp_related.related_comp_id FUL _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 MFB C1 FUL C1 "Carbohydrate core" 2 MFB C2 FUL C2 "Carbohydrate core" 3 MFB C3 FUL C3 "Carbohydrate core" 4 MFB C4 FUL C4 "Carbohydrate core" 5 MFB C5 FUL C5 "Carbohydrate core" 6 MFB C6 FUL C6 "Carbohydrate core" 7 MFB O1 FUL O1 "Carbohydrate core" 8 MFB O2 FUL O2 "Carbohydrate core" 9 MFB O3 FUL O3 "Carbohydrate core" 10 MFB O4 FUL O4 "Carbohydrate core" 11 MFB O5 FUL O5 "Carbohydrate core" 12 MFB H1 FUL H1 "Carbohydrate core" 13 MFB H2 FUL H2 "Carbohydrate core" 14 MFB H3 FUL H3 "Carbohydrate core" 15 MFB H4 FUL H4 "Carbohydrate core" 16 MFB H5 FUL H5 "Carbohydrate core" 17 MFB H61 FUL H61 "Carbohydrate core" 18 MFB H62 FUL H62 "Carbohydrate core" 19 MFB H63 FUL H63 "Carbohydrate core" 20 MFB HO2 FUL HO2 "Carbohydrate core" 21 MFB HO3 FUL HO3 "Carbohydrate core" 22 MFB HO4 FUL HO4 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support MFB "CARBOHYDRATE ISOMER" L PDB ? MFB "CARBOHYDRATE RING" pyranose PDB ? MFB "CARBOHYDRATE ANOMER" beta PDB ? MFB "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site MFB "Create component" 1999-07-08 RCSB MFB "Modify descriptor" 2011-06-04 RCSB MFB "Other modification" 2020-07-03 RCSB MFB "Modify parent residue" 2020-07-17 RCSB MFB "Modify name" 2020-07-17 RCSB MFB "Modify synonyms" 2020-07-17 RCSB MFB "Modify linking type" 2020-07-17 RCSB MFB "Modify leaving atom flag" 2020-07-17 RCSB ##