data_N5H # _chem_comp.id N5H _chem_comp.name "(2~{E},5~{R},10~{E},12~{E},15~{S},19~{R})-20-[[(2~{R},3~{R})-3-aminocarbonyloxy-2-methyl-butanoyl]amino]-3,5,15-trimethyl-7-methylidene-19-oxidanyl-17-oxidanylidene-icosa-2,10,12-trienoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C30 H48 N2 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-11-12 _chem_comp.pdbx_modified_date 2020-03-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 548.711 _chem_comp.one_letter_code ? _chem_comp.three_letter_code N5H _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6TBC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal N5H C01 C1 C 0 1 N N N -3.174 -6.459 -67.641 -7.823 -3.484 -1.447 C01 N5H 1 N5H C02 C2 C 0 1 N N N -4.006 -5.960 -66.757 -7.902 -2.945 -0.256 C02 N5H 2 N5H C03 C3 C 0 1 N N N -5.517 -6.100 -67.002 -6.649 -2.499 0.453 C03 N5H 3 N5H C04 C4 C 0 1 N N N -6.105 -4.864 -67.695 -6.405 -1.015 0.174 C04 N5H 4 N5H C05 C5 C 0 1 N N N -6.457 -3.862 -66.595 -5.153 -0.569 0.883 C05 N5H 5 N5H C06 C6 C 0 1 N N N -5.687 -2.823 -66.300 -4.172 0.011 0.199 C06 N5H 6 N5H C07 C7 C 0 1 N N N -6.013 -1.838 -65.175 -2.950 0.446 0.891 C07 N5H 7 N5H C08 C8 C 0 1 N N N -5.113 -0.939 -64.828 -1.969 1.026 0.207 C08 N5H 8 N5H C09 C9 C 0 1 N N N -5.387 0.044 -63.700 -0.717 1.472 0.917 C09 N5H 9 N5H C10 C10 C 0 1 N N S -5.970 1.327 -64.298 0.503 0.841 0.243 C10 N5H 10 N5H C11 C11 C 0 1 N N N -5.382 2.530 -63.559 0.456 -0.678 0.422 C11 N5H 11 N5H C12 C12 C 0 1 N N N -7.510 1.302 -64.200 1.780 1.390 0.882 C12 N5H 12 N5H C13 C13 C 0 1 N N N -8.184 2.680 -64.157 2.981 0.863 0.139 C13 N5H 13 N5H O14 O1 O 0 1 N N N -7.792 3.557 -64.864 2.830 0.125 -0.805 O14 N5H 14 N5H C15 C14 C 0 1 N N N -9.317 2.901 -63.136 4.369 1.258 0.573 C15 N5H 15 N5H C16 C15 C 0 1 N N R -10.694 3.421 -63.590 5.398 0.591 -0.341 C16 N5H 16 N5H O17 O2 O 0 1 N N N -10.833 3.333 -64.981 5.258 1.102 -1.668 O17 N5H 17 N5H C18 C16 C 0 1 N N N -11.802 2.628 -62.869 6.808 0.890 0.174 C18 N5H 18 N5H N19 N1 N 0 1 N N N -11.531 2.493 -61.436 7.793 0.251 -0.701 N19 N5H 19 N5H C20 C17 C 0 1 N N N -11.662 3.641 -60.570 9.109 0.380 -0.441 C20 N5H 20 N5H O21 O3 O 0 1 N N N -12.019 4.661 -61.068 9.478 1.023 0.519 O21 N5H 21 N5H C22 C18 C 0 1 N N R -11.347 3.557 -59.059 10.124 -0.277 -1.341 C22 N5H 22 N5H C23 C19 C 0 1 N N N -12.571 4.036 -58.274 9.894 -1.790 -1.350 C23 N5H 23 N5H C24 C20 C 0 1 N N R -10.140 4.466 -58.701 11.533 0.022 -0.826 C24 N5H 24 N5H C25 C21 C 0 1 N N N -9.810 4.496 -57.207 11.762 1.535 -0.817 C25 N5H 25 N5H O26 O4 O 0 1 N N N -8.975 4.048 -59.357 11.675 -0.497 0.522 O26 N5H 26 N5H C27 C22 C 0 1 N N N -8.239 5.075 -59.952 12.906 -0.892 0.899 C27 N5H 27 N5H N28 N2 N 0 1 N N N -7.414 4.835 -61.128 13.107 -1.384 2.137 N28 N5H 28 N5H O29 O5 O 0 1 N N N -8.296 6.151 -59.479 13.836 -0.806 0.121 O29 N5H 29 N5H C30 C23 C 0 1 N N N -3.438 -5.217 -65.535 -9.244 -2.771 0.405 C30 N5H 30 N5H C31 C24 C 0 1 N N R -3.283 -6.031 -64.249 -9.783 -1.371 0.104 C31 N5H 31 N5H C32 C25 C 0 1 N N N -2.682 -7.407 -64.521 -10.076 -1.248 -1.392 C32 N5H 32 N5H C33 C26 C 0 1 N N N -2.335 -5.340 -63.262 -11.071 -1.139 0.897 C33 N5H 33 N5H C34 C27 C 0 1 N N N -2.743 -3.895 -62.984 -11.536 0.281 0.697 C34 N5H 34 N5H C35 C28 C 0 1 N N N -4.203 -3.495 -62.780 -10.978 1.384 1.558 C35 N5H 35 N5H C36 C29 C 0 1 N N N -1.793 -2.999 -62.946 -12.438 0.560 -0.241 C36 N5H 36 N5H C37 C30 C 0 1 N N N -2.054 -1.523 -62.701 -12.781 1.958 -0.538 C37 N5H 37 N5H O38 O6 O 0 1 N N N -2.697 -1.098 -61.700 -13.778 2.239 -1.400 O38 N5H 38 N5H O39 O7 O 0 1 N N N -1.577 -0.728 -63.538 -12.165 2.860 -0.006 O39 N5H 39 N5H H1 H1 H 0 1 N N N -2.109 -6.345 -67.505 -6.860 -3.609 -1.921 H1 N5H 40 N5H H2 H2 H 0 1 N N N -3.555 -6.984 -68.505 -8.720 -3.808 -1.954 H2 N5H 41 N5H H3 H3 H 0 1 N N N -6.022 -6.238 -66.035 -6.765 -2.653 1.526 H3 N5H 42 N5H H4 H4 H 0 1 N N N -5.693 -6.981 -67.637 -5.800 -3.081 0.093 H4 N5H 43 N5H H5 H5 H 0 1 N N N -5.365 -4.427 -68.381 -6.289 -0.862 -0.899 H5 N5H 44 N5H H6 H6 H 0 1 N N N -7.009 -5.140 -68.258 -7.254 -0.433 0.534 H6 N5H 45 N5H H7 H7 H 0 1 N N N -7.370 -4.006 -66.036 -5.052 -0.721 1.948 H7 N5H 46 N5H H8 H8 H 0 1 N N N -4.790 -2.665 -66.880 -4.273 0.163 -0.865 H8 N5H 47 N5H H9 H9 H 0 1 N N N -6.968 -1.879 -64.672 -2.849 0.294 1.956 H9 N5H 48 N5H H10 H10 H 0 1 N N N -4.169 -0.900 -65.351 -2.070 1.178 -0.857 H10 N5H 49 N5H H11 H11 H 0 1 N N N -6.106 -0.395 -62.993 -0.638 2.558 0.867 H11 N5H 50 N5H H12 H12 H 0 1 N N N -4.449 0.274 -63.173 -0.758 1.158 1.960 H12 N5H 51 N5H H13 H13 H 0 1 N N N -5.685 1.387 -65.359 0.497 1.082 -0.820 H13 N5H 52 N5H H14 H14 H 0 1 N N N -4.286 2.516 -63.649 -0.454 -1.069 -0.034 H14 N5H 53 N5H H15 H15 H 0 1 N N N -5.775 3.458 -63.999 1.325 -1.128 -0.058 H15 N5H 54 N5H H16 H16 H 0 1 N N N -5.663 2.481 -62.497 0.462 -0.919 1.485 H16 N5H 55 N5H H17 H17 H 0 1 N N N -7.898 0.760 -65.075 1.772 2.478 0.834 H17 N5H 56 N5H H18 H18 H 0 1 N N N -7.784 0.760 -63.283 1.830 1.073 1.924 H18 N5H 57 N5H H19 H19 H 0 1 N N N -9.493 1.931 -62.647 4.475 2.341 0.511 H19 N5H 58 N5H H20 H20 H 0 1 N N N -8.937 3.621 -62.396 4.533 0.935 1.602 H20 N5H 59 N5H H21 H21 H 0 1 N N N -10.776 4.472 -63.277 5.235 -0.487 -0.347 H21 N5H 60 N5H H22 H22 H 0 1 N N N -11.688 3.659 -65.235 5.391 2.057 -1.738 H22 N5H 61 N5H H23 H23 H 0 1 N N N -12.759 3.153 -63.002 6.971 1.967 0.181 H23 N5H 62 N5H H24 H24 H 0 1 N N N -11.869 1.625 -63.315 6.915 0.500 1.187 H24 N5H 63 N5H H25 H25 H 0 1 N N N -11.256 1.609 -61.059 7.499 -0.264 -1.469 H25 N5H 64 N5H H26 H26 H 0 1 N N N -11.115 2.516 -58.788 10.017 0.112 -2.354 H26 N5H 65 N5H H27 H27 H 0 1 N N N -12.360 3.981 -57.196 10.001 -2.180 -0.338 H27 N5H 66 N5H H28 H28 H 0 1 N N N -12.800 5.076 -58.550 8.890 -2.003 -1.717 H28 N5H 67 N5H H29 H29 H 0 1 N N N -13.433 3.395 -58.512 10.627 -2.265 -2.002 H29 N5H 68 N5H H30 H30 H 0 1 N N N -10.391 5.491 -59.012 12.266 -0.453 -1.478 H30 N5H 69 N5H H31 H31 H 0 1 N N N -10.696 4.820 -56.642 11.029 2.010 -0.166 H31 N5H 70 N5H H32 H32 H 0 1 N N N -9.512 3.490 -56.877 12.766 1.747 -0.450 H32 N5H 71 N5H H33 H33 H 0 1 N N N -8.984 5.200 -57.028 11.655 1.924 -1.830 H33 N5H 72 N5H H34 H34 H 0 1 N N N -6.894 5.586 -61.536 13.994 -1.668 2.408 H34 N5H 73 N5H H35 H35 H 0 1 N N N -7.367 3.920 -61.528 12.365 -1.453 2.758 H35 N5H 74 N5H H36 H36 H 0 1 N N N -2.444 -4.834 -65.810 -9.939 -3.518 0.020 H36 N5H 75 N5H H37 H37 H 0 1 N N N -4.108 -4.373 -65.317 -9.138 -2.895 1.483 H37 N5H 76 N5H H38 H38 H 0 1 N N N -4.269 -6.153 -63.777 -9.041 -0.626 0.392 H38 N5H 77 N5H H39 H39 H 0 1 N N N -2.587 -7.960 -63.575 -10.541 -0.283 -1.594 H39 N5H 78 N5H H40 H40 H 0 1 N N N -3.337 -7.964 -65.207 -9.144 -1.326 -1.952 H40 N5H 79 N5H H41 H41 H 0 1 N N N -1.688 -7.289 -64.978 -10.751 -2.047 -1.697 H41 N5H 80 N5H H42 H42 H 0 1 N N N -2.342 -5.898 -62.314 -11.842 -1.826 0.547 H42 N5H 81 N5H H43 H43 H 0 1 N N N -1.319 -5.346 -63.684 -10.883 -1.314 1.956 H43 N5H 82 N5H H44 H44 H 0 1 N N N -4.265 -2.412 -62.595 -10.149 1.866 1.040 H44 N5H 83 N5H H45 H45 H 0 1 N N N -4.781 -3.746 -63.681 -11.758 2.119 1.758 H45 N5H 84 N5H H46 H46 H 0 1 N N N -4.615 -4.039 -61.917 -10.624 0.966 2.500 H46 N5H 85 N5H H47 H47 H 0 1 N N N -0.774 -3.323 -63.096 -12.918 -0.241 -0.784 H47 N5H 86 N5H H48 H48 H 0 1 N N N -2.732 -0.149 -61.725 -13.967 3.173 -1.564 H48 N5H 87 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal N5H C04 C03 SING N N 1 N5H C04 C05 SING N N 2 N5H C01 C02 DOUB N N 3 N5H C03 C02 SING N N 4 N5H C02 C30 SING N N 5 N5H C05 C06 DOUB N E 6 N5H C06 C07 SING N N 7 N5H C30 C31 SING N N 8 N5H C07 C08 DOUB N E 9 N5H O17 C16 SING N N 10 N5H O14 C13 DOUB N N 11 N5H C08 C09 SING N N 12 N5H C32 C31 SING N N 13 N5H C10 C12 SING N N 14 N5H C10 C09 SING N N 15 N5H C10 C11 SING N N 16 N5H C31 C33 SING N N 17 N5H C12 C13 SING N N 18 N5H C13 C15 SING N N 19 N5H C16 C15 SING N N 20 N5H C16 C18 SING N N 21 N5H O39 C37 DOUB N N 22 N5H C33 C34 SING N N 23 N5H C34 C36 DOUB N E 24 N5H C34 C35 SING N N 25 N5H C36 C37 SING N N 26 N5H C18 N19 SING N N 27 N5H C37 O38 SING N N 28 N5H N19 C20 SING N N 29 N5H N28 C27 SING N N 30 N5H O21 C20 DOUB N N 31 N5H C20 C22 SING N N 32 N5H C27 O29 DOUB N N 33 N5H C27 O26 SING N N 34 N5H O26 C24 SING N N 35 N5H C22 C24 SING N N 36 N5H C22 C23 SING N N 37 N5H C24 C25 SING N N 38 N5H C01 H1 SING N N 39 N5H C01 H2 SING N N 40 N5H C03 H3 SING N N 41 N5H C03 H4 SING N N 42 N5H C04 H5 SING N N 43 N5H C04 H6 SING N N 44 N5H C05 H7 SING N N 45 N5H C06 H8 SING N N 46 N5H C07 H9 SING N N 47 N5H C08 H10 SING N N 48 N5H C09 H11 SING N N 49 N5H C09 H12 SING N N 50 N5H C10 H13 SING N N 51 N5H C11 H14 SING N N 52 N5H C11 H15 SING N N 53 N5H C11 H16 SING N N 54 N5H C12 H17 SING N N 55 N5H C12 H18 SING N N 56 N5H C15 H19 SING N N 57 N5H C15 H20 SING N N 58 N5H C16 H21 SING N N 59 N5H O17 H22 SING N N 60 N5H C18 H23 SING N N 61 N5H C18 H24 SING N N 62 N5H N19 H25 SING N N 63 N5H C22 H26 SING N N 64 N5H C23 H27 SING N N 65 N5H C23 H28 SING N N 66 N5H C23 H29 SING N N 67 N5H C24 H30 SING N N 68 N5H C25 H31 SING N N 69 N5H C25 H32 SING N N 70 N5H C25 H33 SING N N 71 N5H N28 H34 SING N N 72 N5H N28 H35 SING N N 73 N5H C30 H36 SING N N 74 N5H C30 H37 SING N N 75 N5H C31 H38 SING N N 76 N5H C32 H39 SING N N 77 N5H C32 H40 SING N N 78 N5H C32 H41 SING N N 79 N5H C33 H42 SING N N 80 N5H C33 H43 SING N N 81 N5H C35 H44 SING N N 82 N5H C35 H45 SING N N 83 N5H C35 H46 SING N N 84 N5H C36 H47 SING N N 85 N5H O38 H48 SING N N 86 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor N5H InChI InChI 1.03 "InChI=1S/C30H48N2O7/c1-20(14-22(3)15-23(4)17-28(35)36)12-10-8-7-9-11-13-21(2)16-26(33)18-27(34)19-32-29(37)24(5)25(6)39-30(31)38/h7-9,11,17,21-22,24-25,27,34H,1,10,12-16,18-19H2,2-6H3,(H2,31,38)(H,32,37)(H,35,36)/b8-7+,11-9+,23-17+/t21-,22+,24+,25+,27+/m0/s1" N5H InChIKey InChI 1.03 GENAAYFYLGYPIQ-YPMJEBJESA-N N5H SMILES_CANONICAL CACTVS 3.385 "C[C@@H](C/C=C/C=C/CCC(=C)C[C@@H](C)C\C(C)=C\C(O)=O)CC(=O)C[C@@H](O)CNC(=O)[C@H](C)[C@@H](C)OC(N)=O" N5H SMILES CACTVS 3.385 "C[CH](CC=CC=CCCC(=C)C[CH](C)CC(C)=CC(O)=O)CC(=O)C[CH](O)CNC(=O)[CH](C)[CH](C)OC(N)=O" N5H SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](C/C=C/C=C/CCC(=C)C[C@@H](C)C/C(=C/C(=O)O)/C)CC(=O)C[C@H](CNC(=O)[C@H](C)[C@@H](C)OC(=O)N)O" N5H SMILES "OpenEye OEToolkits" 2.0.7 "CC(CC=CC=CCCC(=C)CC(C)CC(=CC(=O)O)C)CC(=O)CC(CNC(=O)C(C)C(C)OC(=O)N)O" # _pdbx_chem_comp_identifier.comp_id N5H _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{E},5~{R},10~{E},12~{E},15~{S},19~{R})-20-[[(2~{R},3~{R})-3-aminocarbonyloxy-2-methyl-butanoyl]amino]-3,5,15-trimethyl-7-methylidene-19-oxidanyl-17-oxidanylidene-icosa-2,10,12-trienoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site N5H "Create component" 2019-11-12 PDBE N5H "Initial release" 2020-04-01 RCSB ##