data_N6S # _chem_comp.id N6S _chem_comp.name "(2S)-N6-(1-Methyl-2-phenylethyl)adenosine-3',5'-cyclic monophosphate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H22 N5 O6 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ;(2S,4aS,6R,7R,7aR)-6-(6-{[(1S)-1-methyl-2-phenylethyl]amino}-9H-purin-9-yl)tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphi nine-2,7-diol 2-oxide ; _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-07-08 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 447.382 _chem_comp.one_letter_code ? _chem_comp.three_letter_code N6S _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3I59 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal N6S C5H C5H C 0 1 Y N N -2.207 28.689 -34.100 6.168 1.892 0.910 C5H N6S 1 N6S C5F C5F C 0 1 Y N N -1.184 29.455 -33.177 5.750 3.046 1.544 C5F N6S 2 N6S C5E C5E C 0 1 Y N N -1.141 29.148 -31.650 4.745 3.815 0.988 C5E N6S 3 N6S C5G C5G C 0 1 Y N N -2.137 28.041 -31.003 4.158 3.430 -0.203 C5G N6S 4 N6S C5I C5I C 0 1 Y N N -3.164 27.277 -31.920 4.577 2.275 -0.837 C5I N6S 5 N6S C5U C5U C 0 1 Y N N -3.205 27.584 -33.449 5.581 1.506 -0.281 C5U N6S 6 N6S C5M C5M C 0 1 N N N -4.212 26.818 -34.361 6.037 0.247 -0.972 C5M N6S 7 N6S C5Y C5Y C 0 1 N N S -4.751 25.553 -33.604 5.206 -0.938 -0.475 C5Y N6S 8 N6S C5A C5A C 0 1 N N N -3.675 24.458 -33.438 5.750 -2.233 -1.082 C5A N6S 9 N6S N6 N6 N 0 1 N N N -5.854 25.001 -34.400 3.809 -0.758 -0.878 N6 N6S 10 N6S C6 C6 C 0 1 Y N N -5.607 24.332 -35.684 2.797 -1.365 -0.156 C6 N6S 11 N6S N1 N1 N 0 1 Y N N -4.338 24.416 -36.369 3.074 -2.114 0.906 N1 N6S 12 N6S C2 C2 C 0 1 Y N N -4.120 23.752 -37.789 2.115 -2.698 1.601 C2 N6S 13 N6S N3 N3 N 0 1 Y N N -5.279 23.012 -38.430 0.842 -2.575 1.289 N3 N6S 14 N6S C4 C4 C 0 1 Y N N -6.595 22.926 -37.722 0.468 -1.845 0.243 C4 N6S 15 N6S C5 C5 C 0 1 Y N N -6.801 23.571 -36.348 1.451 -1.199 -0.525 C5 N6S 16 N6S N7 N7 N 0 1 Y N N -8.193 23.332 -35.879 0.810 -0.533 -1.515 N7 N6S 17 N6S C8 C8 C 0 1 Y N N -8.891 22.501 -36.992 -0.473 -0.724 -1.407 C8 N6S 18 N6S N9 N9 N 0 1 Y N N -7.914 22.262 -38.093 -0.735 -1.524 -0.334 N9 N6S 19 N6S C1S C1S C 0 1 N N R -8.157 21.557 -39.372 -2.058 -1.962 0.118 C1S N6S 20 N6S O4S O4S O 0 1 N N N -9.318 22.200 -39.993 -3.002 -1.891 -0.978 O4S N6S 21 N6S C4S C4S C 0 1 N N S -10.413 21.461 -39.348 -3.603 -0.603 -0.880 C4S N6S 22 N6S C5S C5S C 0 1 N N N -11.815 21.716 -39.995 -4.908 -0.404 -1.626 C5S N6S 23 N6S O5S O5S O 0 1 N N N -12.628 20.517 -40.048 -5.284 0.982 -1.444 O5S N6S 24 N6S P5 P5 P 0 1 N N S -12.236 19.257 -38.947 -5.297 1.638 0.040 P5 N6S 25 N6S O5D O5D O 0 1 N N N -12.690 19.856 -37.480 -5.055 3.227 -0.058 O5D N6S 26 N6S O5B O5B O 0 1 N N N -12.903 18.026 -39.307 -6.591 1.362 0.704 O5B N6S 27 N6S O3S O3S O 0 1 N N N -10.730 19.063 -38.758 -4.082 0.940 0.877 O3S N6S 28 N6S C3S C3S C 0 1 N N R -9.952 19.984 -39.530 -3.883 -0.464 0.641 C3S N6S 29 N6S C2S C2S C 0 1 N N R -8.494 20.051 -39.138 -2.576 -1.013 1.228 C2S N6S 30 N6S O2S O2S O 0 1 N N N -7.774 19.267 -40.064 -2.831 -1.739 2.433 O2S N6S 31 N6S H5H H5H H 0 1 N N N -2.244 28.897 -35.159 6.957 1.293 1.342 H5H N6S 32 N6S H5F H5F H 0 1 N N N -0.516 30.190 -33.601 6.208 3.348 2.475 H5F N6S 33 N6S H5E H5E H 0 1 N N N -0.443 29.676 -31.017 4.417 4.717 1.485 H5E N6S 34 N6S H5G H5G H 0 1 N N N -2.095 27.829 -29.945 3.372 4.030 -0.637 H5G N6S 35 N6S H5I H5I H 0 1 N N N -3.835 26.546 -31.494 4.119 1.974 -1.768 H5I N6S 36 N6S H5M H5M H 0 1 N N N -5.054 27.480 -34.613 5.906 0.356 -2.049 H5M N6S 37 N6S H5MA H5MA H 0 0 N N N -3.702 26.502 -35.283 7.090 0.071 -0.750 H5MA N6S 38 N6S H5Y H5Y H 0 1 N N N -5.068 25.860 -32.596 5.266 -0.993 0.612 H5Y N6S 39 N6S H5A H5A H 0 1 N N N -3.419 24.042 -34.424 5.690 -2.178 -2.168 H5A N6S 40 N6S H5AA H5AA H 0 0 N N N -2.775 24.895 -32.980 6.789 -2.366 -0.781 H5AA N6S 41 N6S H5AB H5AB H 0 0 N N N -4.064 23.657 -32.792 5.158 -3.076 -0.727 H5AB N6S 42 N6S HN6 HN6 H 0 1 N N N -6.292 24.316 -33.818 3.594 -0.213 -1.651 HN6 N6S 43 N6S H2 H2 H 0 1 N N N -3.166 23.824 -38.291 2.384 -3.298 2.457 H2 N6S 44 N6S H8 H8 H 0 1 N N N -9.914 22.154 -36.971 -1.219 -0.308 -2.067 H8 N6S 45 N6S H1S H1S H 0 1 N N N -7.256 21.610 -40.001 -2.001 -2.981 0.498 H1S N6S 46 N6S H4S H4S H 0 1 N N N -10.569 21.766 -38.303 -2.886 0.158 -1.190 H4S N6S 47 N6S H5S H5S H 0 1 N N N -12.344 22.470 -39.394 -4.768 -0.617 -2.685 H5S N6S 48 N6S H5SA H5SA H 0 0 N N N -11.651 22.057 -41.028 -5.676 -1.058 -1.213 H5SA N6S 49 N6S HO5D HO5D H 0 0 N N N -12.777 19.142 -36.859 -5.723 3.695 -0.578 HO5D N6S 50 N6S H3S H3S H 0 1 N N N -10.092 19.595 -40.550 -4.746 -1.057 0.943 H3S N6S 51 N6S H2S H2S H 0 1 N N N -8.266 19.702 -38.120 -1.866 -0.206 1.407 H2S N6S 52 N6S HO2S HO2S H 0 0 N N N -7.612 19.774 -40.851 -2.049 -2.167 2.806 HO2S N6S 53 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal N6S C5H C5U DOUB Y N 1 N6S C5H C5F SING Y N 2 N6S C5H H5H SING N N 3 N6S C5F C5E DOUB Y N 4 N6S C5F H5F SING N N 5 N6S C5E C5G SING Y N 6 N6S C5E H5E SING N N 7 N6S C5I C5G DOUB Y N 8 N6S C5G H5G SING N N 9 N6S C5U C5I SING Y N 10 N6S C5I H5I SING N N 11 N6S C5M C5U SING N N 12 N6S C5M C5Y SING N N 13 N6S C5M H5M SING N N 14 N6S C5M H5MA SING N N 15 N6S N6 C5Y SING N N 16 N6S C5Y C5A SING N N 17 N6S C5Y H5Y SING N N 18 N6S C5A H5A SING N N 19 N6S C5A H5AA SING N N 20 N6S C5A H5AB SING N N 21 N6S C6 N6 SING N N 22 N6S N6 HN6 SING N N 23 N6S N1 C6 DOUB Y N 24 N6S C5 C6 SING Y N 25 N6S C2 N1 SING Y N 26 N6S N3 C2 DOUB Y N 27 N6S C2 H2 SING N N 28 N6S N3 C4 SING Y N 29 N6S N9 C4 SING Y N 30 N6S C4 C5 DOUB Y N 31 N6S C5 N7 SING Y N 32 N6S C8 N7 DOUB Y N 33 N6S N9 C8 SING Y N 34 N6S C8 H8 SING N N 35 N6S C1S N9 SING N N 36 N6S O4S C1S SING N N 37 N6S C1S C2S SING N N 38 N6S C1S H1S SING N N 39 N6S O4S C4S SING N N 40 N6S C5S C4S SING N N 41 N6S C3S C4S SING N N 42 N6S C4S H4S SING N N 43 N6S O5S C5S SING N N 44 N6S C5S H5S SING N N 45 N6S C5S H5SA SING N N 46 N6S O5S P5 SING N N 47 N6S O5B P5 DOUB N N 48 N6S P5 O3S SING N N 49 N6S P5 O5D SING N N 50 N6S O5D HO5D SING N N 51 N6S C3S O3S SING N N 52 N6S C3S C2S SING N N 53 N6S C3S H3S SING N N 54 N6S O2S C2S SING N N 55 N6S C2S H2S SING N N 56 N6S O2S HO2S SING N N 57 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor N6S SMILES ACDLabs 10.04 "O=P4(OCC5OC(n2c3ncnc(NC(C)Cc1ccccc1)c3nc2)C(O)C5O4)O" N6S SMILES_CANONICAL CACTVS 3.341 "C[C@@H](Cc1ccccc1)Nc2ncnc3n(cnc23)[C@@H]4O[C@H]5CO[P@@](O)(=O)O[C@@H]5[C@H]4O" N6S SMILES CACTVS 3.341 "C[CH](Cc1ccccc1)Nc2ncnc3n(cnc23)[CH]4O[CH]5CO[P](O)(=O)O[CH]5[CH]4O" N6S SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[C@@H](Cc1ccccc1)Nc2c3c(ncn2)n(cn3)[C@H]4[C@@H]([C@@H]5[C@@H](O4)CO[P@@](=O)(O5)O)O" N6S SMILES "OpenEye OEToolkits" 1.5.0 "CC(Cc1ccccc1)Nc2c3c(ncn2)n(cn3)C4C(C5C(O4)COP(=O)(O5)O)O" N6S InChI InChI 1.03 "InChI=1S/C19H22N5O6P/c1-11(7-12-5-3-2-4-6-12)23-17-14-18(21-9-20-17)24(10-22-14)19-15(25)16-13(29-19)8-28-31(26,27)30-16/h2-6,9-11,13,15-16,19,25H,7-8H2,1H3,(H,26,27)(H,20,21,23)/t11-,13-,15+,16-,19+/m0/s1" N6S InChIKey InChI 1.03 MKYZONTUKKUGCB-IQAYWSRLSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier N6S "SYSTEMATIC NAME" ACDLabs 10.04 "(2S,4aS,6R,7R,7aR)-6-(6-{[(1S)-1-methyl-2-phenylethyl]amino}-9H-purin-9-yl)tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinine-2,7-diol 2-oxide" N6S "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(1S,4S,6R,7R,8R)-4-hydroxy-4-oxo-8-[6-[[(2S)-1-phenylpropan-2-yl]amino]purin-9-yl]-3,5,9-trioxa-4$l^{5}-phosphabicyclo[4.3.0]nonan-7-ol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site N6S "Create component" 2009-07-08 RCSB N6S "Modify aromatic_flag" 2011-06-04 RCSB N6S "Modify descriptor" 2011-06-04 RCSB N6S "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id N6S _pdbx_chem_comp_synonyms.name "(2S,4aS,6R,7R,7aR)-6-(6-{[(1S)-1-methyl-2-phenylethyl]amino}-9H-purin-9-yl)tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinine-2,7-diol 2-oxide" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##