data_ND2 # _chem_comp.id ND2 _chem_comp.name "4-(1-methylcyclopropyl)oxy-~{N}-[1-(1-methylpiperidin-4-yl)pyrazol-4-yl]-6-(1-methylpyrazol-4-yl)pyrido[3,2-d]pyrimidin-2-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H29 N9 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-11-22 _chem_comp.pdbx_modified_date 2020-10-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 459.547 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ND2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6TIA _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ND2 C1 C1 C 0 1 N N N -48.017 -2.917 -59.299 10.047 0.326 0.353 C1 ND2 1 ND2 C3 C2 C 0 1 N N N -49.178 -4.907 -58.468 7.970 1.350 1.060 C3 ND2 2 ND2 C7 C3 C 0 1 N N N -48.324 -3.215 -56.894 8.088 0.187 -1.063 C7 ND2 3 ND2 C9 C4 C 0 1 Y N N -51.152 -6.834 -54.727 3.850 -0.382 -0.135 C9 ND2 4 ND2 C10 C5 C 0 1 Y N N -52.096 -6.834 -53.746 2.508 -0.180 -0.112 C10 ND2 5 ND2 C12 C6 C 0 1 Y N N -53.414 -8.192 -52.042 0.182 -0.828 0.002 C12 ND2 6 ND2 C14 C7 C 0 1 Y N N -54.514 -7.379 -50.105 -2.023 -1.521 0.126 C14 ND2 7 ND2 C16 C8 C 0 1 N N N -55.429 -6.031 -48.098 -2.444 -3.854 0.206 C16 ND2 8 ND2 C19 C9 C 0 1 N N N -55.146 -4.634 -47.528 -2.113 -4.460 -1.159 C19 ND2 9 ND2 C20 C10 C 0 1 Y N N -54.868 -8.735 -49.776 -2.430 -0.165 0.039 C20 ND2 10 ND2 C22 C11 C 0 1 Y N N -55.888 -10.350 -48.427 -4.081 1.448 -0.027 C22 ND2 11 ND2 C24 C12 C 0 1 Y N N -54.740 -11.121 -50.392 -1.804 2.178 -0.156 C24 ND2 12 ND2 N26 N1 N 0 1 Y N N -53.727 -9.448 -51.767 -0.140 0.449 -0.083 N26 ND2 13 ND2 C27 C13 C 0 1 Y N N -56.647 -10.662 -47.186 -5.524 1.788 -0.004 C27 ND2 14 ND2 N29 N2 N 0 1 Y N N -57.646 -10.401 -45.244 -7.377 2.973 -0.028 N29 ND2 15 ND2 C31 C14 C 0 1 N N N -58.301 -12.844 -44.811 -9.059 1.065 0.167 C31 ND2 16 ND2 C32 C15 C 0 1 Y N N -57.082 -11.901 -46.788 -6.561 0.905 0.096 C32 ND2 17 ND2 C33 C16 C 0 1 Y N N -52.353 -5.491 -53.425 2.280 1.201 -0.207 C33 ND2 18 ND2 N2 N3 N 0 1 N N N -48.875 -3.476 -58.243 8.581 0.238 0.320 N2 ND2 19 ND2 C4 C17 C 0 1 N N N -50.229 -5.400 -57.451 6.455 1.149 1.128 C4 ND2 20 ND2 C5 C18 C 0 1 N N N -49.783 -5.119 -55.995 5.889 1.086 -0.294 C5 ND2 21 ND2 C6 C19 C 0 1 N N N -49.322 -3.653 -55.799 6.576 -0.050 -1.058 C6 ND2 22 ND2 N8 N4 N 0 1 Y N N -50.801 -5.546 -55.005 4.447 0.834 -0.236 N8 ND2 23 ND2 N11 N5 N 0 1 N N N -52.700 -8.007 -53.230 1.520 -1.178 -0.011 N11 ND2 24 ND2 N13 N6 N 0 1 Y N N -53.815 -7.190 -51.238 -0.730 -1.792 0.104 N13 ND2 25 ND2 O15 O1 O 0 1 N N N -54.833 -6.241 -49.399 -2.937 -2.513 0.231 O15 ND2 26 ND2 C17 C20 C 0 1 N N N -56.882 -6.479 -47.898 -1.561 -4.255 1.390 C17 ND2 27 ND2 C18 C21 C 0 1 N N N -54.532 -5.859 -46.866 -3.352 -4.930 -0.394 C18 ND2 28 ND2 N21 N7 N 0 1 Y N N -55.566 -9.088 -48.689 -3.715 0.182 0.055 N21 ND2 29 ND2 C23 C22 C 0 1 Y N N -55.465 -11.405 -49.268 -3.134 2.478 -0.133 C23 ND2 30 ND2 C25 C23 C 0 1 Y N N -54.429 -9.768 -50.669 -1.425 0.826 -0.069 C25 ND2 31 ND2 C28 C24 C 0 1 Y N N -57.022 -9.740 -46.184 -6.076 3.083 -0.077 C28 ND2 32 ND2 N30 N8 N 0 1 Y N N -57.689 -11.762 -45.594 -7.705 1.616 0.081 N30 ND2 33 ND2 N34 N9 N 0 1 Y N N -51.580 -4.730 -54.164 3.438 1.805 -0.285 N34 ND2 34 ND2 H1 H1 H 0 1 N N N -47.820 -1.855 -59.089 10.389 0.287 1.387 H1 ND2 35 ND2 H2 H2 H 0 1 N N N -47.065 -3.468 -59.328 10.473 -0.510 -0.203 H2 ND2 36 ND2 H3 H3 H 0 1 N N N -48.524 -3.010 -60.271 10.365 1.264 -0.101 H3 ND2 37 ND2 H4 H4 H 0 1 N N N -49.570 -5.039 -59.487 8.378 1.381 2.070 H4 ND2 38 ND2 H5 H5 H 0 1 N N N -48.256 -5.496 -58.351 8.189 2.289 0.551 H5 ND2 39 ND2 H6 H6 H 0 1 N N N -47.386 -3.777 -56.773 8.306 1.131 -1.562 H6 ND2 40 ND2 H7 H7 H 0 1 N N N -48.123 -2.139 -56.789 8.581 -0.627 -1.594 H7 ND2 41 ND2 H8 H8 H 0 1 N N N -50.747 -7.712 -55.207 4.352 -1.337 -0.079 H8 ND2 42 ND2 H9 H9 H 0 1 N N N -54.508 -3.932 -48.085 -2.272 -3.836 -2.039 H9 ND2 43 ND2 H10 H10 H 0 1 N N N -55.945 -4.076 -47.018 -1.266 -5.144 -1.214 H10 ND2 44 ND2 H11 H11 H 0 1 N N N -54.412 -11.910 -51.053 -1.061 2.958 -0.239 H11 ND2 45 ND2 H12 H12 H 0 1 N N N -58.733 -12.430 -43.888 -9.361 1.005 1.212 H12 ND2 46 ND2 H13 H13 H 0 1 N N N -59.094 -13.322 -45.404 -9.750 1.712 -0.374 H13 ND2 47 ND2 H14 H14 H 0 1 N N N -57.534 -13.590 -44.555 -9.075 0.068 -0.274 H14 ND2 48 ND2 H15 H15 H 0 1 N N N -56.959 -12.824 -47.335 -6.478 -0.169 0.173 H15 ND2 49 ND2 H16 H16 H 0 1 N N N -53.067 -5.143 -52.693 1.314 1.683 -0.216 H16 ND2 50 ND2 H18 H18 H 0 1 N N N -51.180 -4.881 -57.640 6.235 0.217 1.649 H18 ND2 51 ND2 H19 H19 H 0 1 N N N -50.370 -6.483 -57.579 6.000 1.982 1.663 H19 ND2 52 ND2 H20 H20 H 0 1 N N N -48.893 -5.743 -55.824 6.075 2.032 -0.802 H20 ND2 53 ND2 H21 H21 H 0 1 N N N -48.836 -3.561 -54.817 6.208 -0.072 -2.084 H21 ND2 54 ND2 H22 H22 H 0 1 N N N -50.203 -2.995 -55.836 6.358 -1.000 -0.572 H22 ND2 55 ND2 H23 H23 H 0 1 N N N -52.601 -8.823 -53.799 1.778 -2.111 0.051 H23 ND2 56 ND2 H24 H24 H 0 1 N N N -57.196 -6.257 -46.867 -0.548 -3.888 1.227 H24 ND2 57 ND2 H25 H25 H 0 1 N N N -57.532 -5.941 -48.603 -1.962 -3.821 2.306 H25 ND2 58 ND2 H26 H26 H 0 1 N N N -56.960 -7.561 -48.080 -1.544 -5.341 1.479 H26 ND2 59 ND2 H27 H27 H 0 1 N N N -54.888 -6.185 -45.878 -3.320 -5.923 0.054 H27 ND2 60 ND2 H28 H28 H 0 1 N N N -53.450 -6.041 -46.945 -4.325 -4.614 -0.770 H28 ND2 61 ND2 H29 H29 H 0 1 N N N -55.713 -12.428 -49.024 -3.458 3.507 -0.199 H29 ND2 62 ND2 H30 H30 H 0 1 N N N -56.828 -8.678 -46.193 -5.520 4.006 -0.158 H30 ND2 63 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ND2 C1 N2 SING N N 1 ND2 C3 N2 SING N N 2 ND2 C3 C4 SING N N 3 ND2 N2 C7 SING N N 4 ND2 C4 C5 SING N N 5 ND2 C7 C6 SING N N 6 ND2 C5 C6 SING N N 7 ND2 C5 N8 SING N N 8 ND2 N8 C9 SING Y N 9 ND2 N8 N34 SING Y N 10 ND2 C9 C10 DOUB Y N 11 ND2 N34 C33 DOUB Y N 12 ND2 C10 C33 SING Y N 13 ND2 C10 N11 SING N N 14 ND2 N11 C12 SING N N 15 ND2 C12 N26 DOUB Y N 16 ND2 C12 N13 SING Y N 17 ND2 N26 C25 SING Y N 18 ND2 N13 C14 DOUB Y N 19 ND2 C25 C24 DOUB Y N 20 ND2 C25 C20 SING Y N 21 ND2 C24 C23 SING Y N 22 ND2 C14 C20 SING Y N 23 ND2 C14 O15 SING N N 24 ND2 C20 N21 DOUB Y N 25 ND2 O15 C16 SING N N 26 ND2 C23 C22 DOUB Y N 27 ND2 N21 C22 SING Y N 28 ND2 C22 C27 SING N N 29 ND2 C16 C17 SING N N 30 ND2 C16 C19 SING N N 31 ND2 C16 C18 SING N N 32 ND2 C19 C18 SING N N 33 ND2 C27 C32 DOUB Y N 34 ND2 C27 C28 SING Y N 35 ND2 C32 N30 SING Y N 36 ND2 C28 N29 DOUB Y N 37 ND2 N30 N29 SING Y N 38 ND2 N30 C31 SING N N 39 ND2 C1 H1 SING N N 40 ND2 C1 H2 SING N N 41 ND2 C1 H3 SING N N 42 ND2 C3 H4 SING N N 43 ND2 C3 H5 SING N N 44 ND2 C7 H6 SING N N 45 ND2 C7 H7 SING N N 46 ND2 C9 H8 SING N N 47 ND2 C19 H9 SING N N 48 ND2 C19 H10 SING N N 49 ND2 C24 H11 SING N N 50 ND2 C31 H12 SING N N 51 ND2 C31 H13 SING N N 52 ND2 C31 H14 SING N N 53 ND2 C32 H15 SING N N 54 ND2 C33 H16 SING N N 55 ND2 C4 H18 SING N N 56 ND2 C4 H19 SING N N 57 ND2 C5 H20 SING N N 58 ND2 C6 H21 SING N N 59 ND2 C6 H22 SING N N 60 ND2 N11 H23 SING N N 61 ND2 C17 H24 SING N N 62 ND2 C17 H25 SING N N 63 ND2 C17 H26 SING N N 64 ND2 C18 H27 SING N N 65 ND2 C18 H28 SING N N 66 ND2 C23 H29 SING N N 67 ND2 C28 H30 SING N N 68 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ND2 InChI InChI 1.03 "InChI=1S/C24H29N9O/c1-24(8-9-24)34-22-21-20(5-4-19(28-21)16-12-25-32(3)14-16)29-23(30-22)27-17-13-26-33(15-17)18-6-10-31(2)11-7-18/h4-5,12-15,18H,6-11H2,1-3H3,(H,27,29,30)" ND2 InChIKey InChI 1.03 WGMWEVJCHUDPID-UHFFFAOYSA-N ND2 SMILES_CANONICAL CACTVS 3.385 "CN1CCC(CC1)n2cc(Nc3nc(OC4(C)CC4)c5nc(ccc5n3)c6cnn(C)c6)cn2" ND2 SMILES CACTVS 3.385 "CN1CCC(CC1)n2cc(Nc3nc(OC4(C)CC4)c5nc(ccc5n3)c6cnn(C)c6)cn2" ND2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1(CC1)Oc2c3c(ccc(n3)c4cnn(c4)C)nc(n2)Nc5cnn(c5)C6CCN(CC6)C" ND2 SMILES "OpenEye OEToolkits" 2.0.7 "CC1(CC1)Oc2c3c(ccc(n3)c4cnn(c4)C)nc(n2)Nc5cnn(c5)C6CCN(CC6)C" # _pdbx_chem_comp_identifier.comp_id ND2 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-(1-methylcyclopropyl)oxy-~{N}-[1-(1-methylpiperidin-4-yl)pyrazol-4-yl]-6-(1-methylpyrazol-4-yl)pyrido[3,2-d]pyrimidin-2-amine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ND2 "Create component" 2019-11-22 PDBE ND2 "Initial release" 2020-10-28 RCSB ##