data_ND5 # _chem_comp.id ND5 _chem_comp.name "3-[(~{E})-[3,5-bis(bromanyl)-2-oxidanyl-phenyl]methylideneamino]oxypropanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H9 Br2 N O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-11-22 _chem_comp.pdbx_modified_date 2020-10-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 366.991 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ND5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6TI9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ND5 C01 C1 C 0 1 Y N N 0.180 1.222 8.053 -0.350 -0.547 0.003 C01 ND5 1 ND5 C02 C2 C 0 1 Y N N -0.086 0.136 7.234 -0.261 0.851 0.001 C02 ND5 2 ND5 C03 C3 C 0 1 Y N N -0.221 -1.098 7.799 -1.428 1.618 0.000 C03 ND5 3 ND5 C04 C4 C 0 1 Y N N -0.094 -1.240 9.155 -2.659 0.996 0.001 C04 ND5 4 ND5 C05 C5 C 0 1 Y N N 0.176 -0.158 9.986 -2.743 -0.387 0.002 C05 ND5 5 ND5 C06 C6 C 0 1 Y N N 0.322 1.104 9.427 -1.595 -1.156 0.004 C06 ND5 6 ND5 C09 C7 C 0 1 N N N -0.236 0.216 5.715 1.059 1.510 0.001 C09 ND5 7 ND5 C13 C8 C 0 1 N N N -1.677 -1.903 3.375 4.508 0.521 0.003 C13 ND5 8 ND5 C14 C9 C 0 1 N N N -3.069 -1.362 3.067 5.819 1.310 0.002 C14 ND5 9 ND5 C15 C10 C 0 1 N N N -3.418 -1.563 1.597 6.982 0.352 0.004 C15 ND5 10 ND5 N11 N1 N 0 1 N N N -0.679 -0.795 5.115 2.138 0.796 0.002 N11 ND5 11 ND5 O07 O1 O 0 1 N N N 0.325 2.461 7.467 0.779 -1.302 -0.002 O07 ND5 12 ND5 O12 O2 O 0 1 N N N -0.842 -0.833 3.722 3.405 1.429 0.002 O12 ND5 13 ND5 O16 O3 O 0 1 N N N -2.513 -1.536 0.722 6.784 -0.840 0.005 O16 ND5 14 ND5 O17 O4 O 0 1 N N N -4.617 -1.748 1.260 8.239 0.823 0.004 O17 ND5 15 ND5 BR1 BR1 BR 0 0 N N N -0.313 -3.036 9.816 -4.239 2.035 -0.000 BR10 ND5 16 ND5 BR8 BR2 BR 0 0 N N N 0.705 2.684 10.520 -1.722 -3.043 0.006 BR8 ND5 17 ND5 H03 H1 H 0 1 N N N -0.427 -1.959 7.180 -1.366 2.696 -0.001 H03 ND5 18 ND5 H05 H2 H 0 1 N N N 0.271 -0.298 11.053 -3.711 -0.866 0.003 H05 ND5 19 ND5 H09 H3 H 0 1 N N N 0.030 1.113 5.175 1.124 2.588 -0.000 H09 ND5 20 ND5 H131 H4 H 0 0 N N N -1.734 -2.614 4.212 4.463 -0.108 -0.887 H131 ND5 21 ND5 H132 H5 H 0 0 N N N -1.274 -2.413 2.488 4.462 -0.106 0.893 H132 ND5 22 ND5 H142 H6 H 0 0 N N N -3.097 -0.287 3.300 5.865 1.937 -0.888 H142 ND5 23 ND5 H141 H7 H 0 0 N N N -3.807 -1.892 3.688 5.865 1.938 0.892 H141 ND5 24 ND5 HO07 H8 H 0 0 N N N 0.503 3.110 8.138 1.104 -1.518 -0.886 HO07 ND5 25 ND5 H1 H9 H 0 1 N N N -4.669 -1.849 0.317 8.953 0.170 0.004 H1 ND5 26 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ND5 O16 C15 DOUB N N 1 ND5 O17 C15 SING N N 2 ND5 C15 C14 SING N N 3 ND5 C14 C13 SING N N 4 ND5 C13 O12 SING N N 5 ND5 O12 N11 SING N N 6 ND5 N11 C09 DOUB N E 7 ND5 C09 C02 SING N N 8 ND5 C02 C03 DOUB Y N 9 ND5 C02 C01 SING Y N 10 ND5 O07 C01 SING N N 11 ND5 C03 C04 SING Y N 12 ND5 C01 C06 DOUB Y N 13 ND5 C04 BR1 SING N N 14 ND5 C04 C05 DOUB Y N 15 ND5 C06 C05 SING Y N 16 ND5 C06 BR8 SING N N 17 ND5 C03 H03 SING N N 18 ND5 C05 H05 SING N N 19 ND5 C09 H09 SING N N 20 ND5 C13 H131 SING N N 21 ND5 C13 H132 SING N N 22 ND5 C14 H142 SING N N 23 ND5 C14 H141 SING N N 24 ND5 O07 HO07 SING N N 25 ND5 O17 H1 SING N N 26 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ND5 InChI InChI 1.03 "InChI=1S/C10H9Br2NO4/c11-7-3-6(10(16)8(12)4-7)5-13-17-2-1-9(14)15/h3-5,16H,1-2H2,(H,14,15)/b13-5+" ND5 InChIKey InChI 1.03 VPPGEQCITQLSNE-WLRTZDKTSA-N ND5 SMILES_CANONICAL CACTVS 3.385 "OC(=O)CCO\N=C\c1cc(Br)cc(Br)c1O" ND5 SMILES CACTVS 3.385 "OC(=O)CCON=Cc1cc(Br)cc(Br)c1O" ND5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1c(cc(c(c1/C=N/OCCC(=O)O)O)Br)Br" ND5 SMILES "OpenEye OEToolkits" 2.0.7 "c1c(cc(c(c1C=NOCCC(=O)O)O)Br)Br" # _pdbx_chem_comp_identifier.comp_id ND5 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "3-[(~{E})-[3,5-bis(bromanyl)-2-oxidanyl-phenyl]methylideneamino]oxypropanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ND5 "Create component" 2019-11-22 PDBE ND5 "Initial release" 2020-10-21 RCSB ##