data_NDF # _chem_comp.id NDF _chem_comp.name "N-(CARBOXYCARBONYL)-D-PHENYLALANINE" _chem_comp.type "D-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C11 H11 N O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2004-12-26 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 237.209 _chem_comp.one_letter_code F _chem_comp.three_letter_code NDF _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1YCI _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal NDF CD1 CD1 C 0 1 Y N N 19.964 26.253 33.016 0.791 -0.828 2.805 CD1 NDF 1 NDF CE1 CE1 C 0 1 Y N N 21.092 26.391 33.835 -0.158 -1.067 3.781 CE1 NDF 2 NDF CZ CZ C 0 1 Y N N 22.163 25.529 33.687 -1.231 -0.208 3.926 CZ NDF 3 NDF CE2 CE2 C 0 1 Y N N 22.118 24.517 32.717 -1.355 0.889 3.096 CE2 NDF 4 NDF CD2 CD2 C 0 1 Y N N 21.004 24.379 31.909 -0.403 1.131 2.123 CD2 NDF 5 NDF CG CG C 0 1 Y N N 19.920 25.254 32.061 0.667 0.269 1.974 CG NDF 6 NDF CB CB C 0 1 N N N 18.677 25.085 31.183 1.702 0.530 0.911 CB NDF 7 NDF CA CA C 0 1 N N R 18.796 25.862 29.871 1.292 -0.173 -0.383 CA NDF 8 NDF C C C 0 1 N N N 17.521 25.655 29.056 2.327 0.087 -1.447 C NDF 9 NDF O O O 0 1 N N N 17.544 25.049 27.989 3.265 -0.663 -1.573 O NDF 10 NDF OXT OXT O 0 1 N Y N 16.444 26.101 29.474 2.206 1.153 -2.253 OXT NDF 11 NDF N N N 0 1 N N N 19.969 25.367 29.136 -0.005 0.339 -0.828 N NDF 12 NDF C2 C2 C 0 1 N N N 21.075 26.094 28.994 -0.843 -0.457 -1.521 C2 NDF 13 NDF "O2'" "O2'" O 0 1 N N N 21.184 27.241 29.427 -0.523 -1.599 -1.776 "O2'" NDF 14 NDF C1 C1 C 0 1 N N N 22.263 25.498 28.238 -2.167 0.066 -1.975 C1 NDF 15 NDF O1 O1 O 0 1 N N N 22.142 24.400 27.674 -3.004 -0.728 -2.667 O1 NDF 16 NDF O2 O2 O 0 1 N N N 23.332 26.087 28.195 -2.488 1.207 -1.720 O2 NDF 17 NDF HD1 HD1 H 0 1 N N N 19.104 26.936 33.124 1.629 -1.499 2.691 HD1 NDF 18 NDF HE1 HE1 H 0 1 N N N 21.137 27.183 34.601 -0.061 -1.925 4.429 HE1 NDF 19 NDF HZ HZ H 0 1 N N N 23.046 25.648 34.337 -1.974 -0.396 4.688 HZ NDF 20 NDF HE2 HE2 H 0 1 N N N 22.966 23.824 32.589 -2.194 1.560 3.209 HE2 NDF 21 NDF HD2 HD2 H 0 1 N N N 20.980 23.579 31.151 -0.500 1.989 1.475 HD2 NDF 22 NDF HB3 1HB H 0 1 N N N 17.749 25.363 31.736 2.668 0.149 1.242 HB3 NDF 23 NDF HB2 2HB H 0 1 N N N 18.455 24.008 30.998 1.777 1.603 0.733 HB2 NDF 24 NDF HA HA H 0 1 N N N 18.924 26.952 30.067 1.216 -1.246 -0.205 HA NDF 25 NDF HXT HXT H 0 1 N Y N 15.651 25.972 28.967 2.871 1.320 -2.936 HXT NDF 26 NDF H HN H 0 1 N N N 20.019 24.451 28.691 -0.262 1.252 -0.624 H NDF 27 NDF HO1 HO1 H 0 1 N N N 22.880 24.030 27.204 -3.860 -0.389 -2.961 HO1 NDF 28 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal NDF CD1 CE1 DOUB Y N 1 NDF CD1 CG SING Y N 2 NDF CD1 HD1 SING N N 3 NDF CE1 CZ SING Y N 4 NDF CE1 HE1 SING N N 5 NDF CZ CE2 DOUB Y N 6 NDF CZ HZ SING N N 7 NDF CE2 CD2 SING Y N 8 NDF CE2 HE2 SING N N 9 NDF CD2 CG DOUB Y N 10 NDF CD2 HD2 SING N N 11 NDF CG CB SING N N 12 NDF CB CA SING N N 13 NDF CB HB3 SING N N 14 NDF CB HB2 SING N N 15 NDF CA C SING N N 16 NDF CA N SING N N 17 NDF CA HA SING N N 18 NDF C O DOUB N N 19 NDF C OXT SING N N 20 NDF OXT HXT SING N N 21 NDF N C2 SING N N 22 NDF N H SING N N 23 NDF C2 "O2'" DOUB N N 24 NDF C2 C1 SING N N 25 NDF C1 O1 SING N N 26 NDF C1 O2 DOUB N N 27 NDF O1 HO1 SING N N 28 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor NDF SMILES ACDLabs 10.04 "O=C(O)C(=O)NC(C(=O)O)Cc1ccccc1" NDF SMILES_CANONICAL CACTVS 3.341 "OC(=O)[C@@H](Cc1ccccc1)NC(=O)C(O)=O" NDF SMILES CACTVS 3.341 "OC(=O)[CH](Cc1ccccc1)NC(=O)C(O)=O" NDF SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1ccc(cc1)C[C@H](C(=O)O)NC(=O)C(=O)O" NDF SMILES "OpenEye OEToolkits" 1.5.0 "c1ccc(cc1)CC(C(=O)O)NC(=O)C(=O)O" NDF InChI InChI 1.03 "InChI=1S/C11H11NO5/c13-9(11(16)17)12-8(10(14)15)6-7-4-2-1-3-5-7/h1-5,8H,6H2,(H,12,13)(H,14,15)(H,16,17)/t8-/m1/s1" NDF InChIKey InChI 1.03 ULQWGBCNOHBNDB-MRVPVSSYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NDF "SYSTEMATIC NAME" ACDLabs 10.04 "N-(carboxycarbonyl)-D-phenylalanine" NDF "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R)-2-(carboxycarbonylamino)-3-phenyl-propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site NDF "Create component" 2004-12-26 RCSB NDF "Modify descriptor" 2011-06-04 RCSB #