data_NU2 # _chem_comp.id NU2 _chem_comp.name "(3~{R},6~{R})-6-[(2~{S})-butan-2-yl]-3-(2,3-dihydro-1~{H}-inden-2-yl)-1-[(1~{R})-1-(2-methyl-1,3-oxazol-4-yl)-2-morpholin-4-yl-2-oxidanylidene-ethyl]piperazine-2,5-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H34 N4 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-12-13 _chem_comp.pdbx_modified_date 2020-07-31 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 494.583 _chem_comp.one_letter_code ? _chem_comp.three_letter_code NU2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6TPK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal NU2 C10 C1 C 0 1 N N N -7.986 3.454 123.750 2.748 -0.052 -0.239 C10 NU2 1 NU2 C13 C2 C 0 1 N N N -6.549 3.112 123.586 4.214 -0.360 -0.610 C13 NU2 2 NU2 C15 C3 C 0 1 N N N -7.835 2.495 126.192 0.394 -0.146 -0.974 C15 NU2 3 NU2 C17 C4 C 0 1 Y N N -6.306 3.670 122.139 5.015 0.798 -0.054 C17 NU2 4 NU2 C20 C5 C 0 1 N N R -6.709 0.808 127.728 -1.825 -0.554 -0.126 C20 NU2 5 NU2 C21 C6 C 0 1 N N N -7.701 -1.119 123.314 0.513 -4.066 1.549 C21 NU2 6 NU2 C22 C7 C 0 1 N N N -5.797 -0.967 124.880 -1.072 -2.215 2.100 C22 NU2 7 NU2 C24 C8 C 0 1 Y N N -5.056 4.239 121.407 6.372 0.914 0.193 C24 NU2 8 NU2 C26 C9 C 0 1 Y N N -6.456 -0.636 128.049 -2.497 -0.034 -1.371 C26 NU2 9 NU2 C28 C10 C 0 1 Y N N -5.184 4.727 119.939 6.887 2.086 0.711 C28 NU2 10 NU2 C11 C11 C 0 1 N N R -8.724 2.838 124.957 1.797 -0.521 -1.342 C11 NU2 11 NU2 C12 C12 C 0 1 N N R -8.078 0.062 125.553 -0.141 -2.415 -0.209 C12 NU2 12 NU2 C14 C13 C 0 1 N N N -8.604 3.027 122.392 2.744 1.487 -0.130 C14 NU2 13 NU2 C16 C14 C 0 1 N N S -7.076 -0.241 124.406 0.160 -2.602 1.279 C16 NU2 14 NU2 C18 C15 C 0 1 Y N N -7.624 3.600 121.428 4.172 1.860 0.220 C18 NU2 15 NU2 C19 C16 C 0 1 N N N -9.432 0.403 124.904 1.062 -2.836 -0.996 C19 NU2 16 NU2 C23 C17 C 0 1 N N N -7.362 1.398 129.033 -1.738 0.551 0.896 C23 NU2 17 NU2 C25 C18 C 0 1 Y N N -7.769 4.086 119.955 4.690 3.033 0.741 C25 NU2 18 NU2 C27 C19 C 0 1 N N N -7.944 -2.575 123.864 0.934 -4.228 3.011 C27 NU2 19 NU2 C29 C20 C 0 1 Y N N -6.533 4.652 119.214 6.045 3.147 0.986 C29 NU2 20 NU2 C30 C21 C 0 1 N N N -7.229 1.933 131.568 -4.023 0.017 1.616 C30 NU2 21 NU2 C31 C22 C 0 1 N N N -5.324 0.907 130.612 -2.784 1.988 2.588 C31 NU2 22 NU2 C32 C23 C 0 1 Y N N -7.362 -1.620 128.302 -3.821 0.037 -1.586 C32 NU2 23 NU2 C33 C24 C 0 1 N N N -6.257 2.783 132.398 -5.226 0.947 1.424 C33 NU2 24 NU2 C34 C25 C 0 1 N N N -4.371 1.967 131.185 -4.048 2.822 2.349 C34 NU2 25 NU2 C35 C26 C 0 1 Y N N -5.366 -2.441 128.517 -2.783 0.799 -3.333 C35 NU2 26 NU2 C36 C27 C 0 1 N N N -4.184 -3.413 128.770 -2.510 1.385 -4.695 C36 NU2 27 NU2 N06 N1 N 0 1 N N N -7.533 1.093 126.515 -0.476 -1.020 -0.457 N06 NU2 28 NU2 N07 N2 N 0 1 N N N -9.727 1.817 124.587 1.933 -1.962 -1.508 N07 NU2 29 NU2 N08 N3 N 0 1 N N N -6.650 1.409 130.342 -2.804 0.840 1.668 N08 NU2 30 NU2 N09 N4 N 0 1 Y N N -5.240 -1.151 128.202 -1.879 0.446 -2.465 N09 NU2 31 NU2 O01 O1 O 0 1 N N N -7.456 3.380 126.892 0.034 0.999 -1.147 O01 NU2 32 NU2 O02 O2 O 0 1 N N N -10.236 -0.434 124.633 1.249 -4.020 -1.183 O02 NU2 33 NU2 O03 O3 O 0 1 N N N -8.463 1.846 128.995 -0.709 1.179 1.023 O03 NU2 34 NU2 O04 O4 O 0 1 N N N -5.055 3.101 131.707 -5.194 1.970 2.421 O04 NU2 35 NU2 O05 O5 O 0 1 Y N N -6.688 -2.729 128.575 -3.995 0.558 -2.816 O05 NU2 36 NU2 H1 H1 H 0 1 N N N -8.076 4.548 123.826 2.486 -0.509 0.716 H1 NU2 37 NU2 H2 H2 H 0 1 N N N -6.378 2.027 123.640 4.532 -1.296 -0.151 H2 NU2 38 NU2 H3 H3 H 0 1 N N N -5.920 3.620 124.332 4.326 -0.414 -1.693 H3 NU2 39 NU2 H4 H4 H 0 1 N N N -5.735 1.303 127.602 -2.405 -1.381 0.282 H4 NU2 40 NU2 H5 H5 H 0 1 N N N -7.021 -1.165 122.450 -0.356 -4.692 1.349 H5 NU2 41 NU2 H6 H6 H 0 1 N N N -8.661 -0.683 123.002 1.334 -4.367 0.899 H6 NU2 42 NU2 H7 H7 H 0 1 N N N -5.309 -0.374 125.668 -1.912 -2.850 1.817 H7 NU2 43 NU2 H8 H8 H 0 1 N N N -6.064 -1.957 125.278 -0.858 -2.348 3.161 H8 NU2 44 NU2 H9 H9 H 0 1 N N N -5.108 -1.087 124.031 -1.324 -1.172 1.908 H9 NU2 45 NU2 H10 H10 H 0 1 N N N -4.106 4.294 121.917 7.031 0.085 -0.021 H10 NU2 46 NU2 H11 H11 H 0 1 N N N -4.319 5.121 119.426 7.946 2.173 0.903 H11 NU2 47 NU2 H12 H12 H 0 1 N N N -9.335 3.676 125.324 2.065 -0.028 -2.277 H12 NU2 48 NU2 H13 H13 H 0 1 N N N -8.215 -0.874 126.115 -0.990 -3.041 -0.483 H13 NU2 49 NU2 H14 H14 H 0 1 N N N -9.606 3.460 122.252 2.461 1.933 -1.083 H14 NU2 50 NU2 H15 H15 H 0 1 N N N -8.662 1.932 122.303 2.061 1.809 0.656 H15 NU2 51 NU2 H16 H16 H 0 1 N N N -6.779 0.716 123.952 0.999 -1.967 1.563 H16 NU2 52 NU2 H17 H17 H 0 1 N N N -8.724 4.029 119.455 4.033 3.863 0.955 H17 NU2 53 NU2 H18 H18 H 0 1 N N N -8.392 -3.196 123.074 1.186 -5.271 3.203 H18 NU2 54 NU2 H19 H19 H 0 1 N N N -6.985 -3.014 124.176 1.803 -3.602 3.210 H19 NU2 55 NU2 H20 H20 H 0 1 N N N -8.625 -2.532 124.727 0.112 -3.927 3.661 H20 NU2 56 NU2 H21 H21 H 0 1 N N N -6.620 4.992 118.193 6.446 4.064 1.391 H21 NU2 57 NU2 H22 H22 H 0 1 N N N -8.096 2.556 131.303 -4.132 -0.537 2.548 H22 NU2 58 NU2 H23 H23 H 0 1 N N N -7.562 1.085 132.185 -3.960 -0.680 0.780 H23 NU2 59 NU2 H24 H24 H 0 1 N N N -5.405 0.083 131.337 -1.900 2.597 2.396 H24 NU2 60 NU2 H25 H25 H 0 1 N N N -4.897 0.528 129.672 -2.768 1.633 3.619 H25 NU2 61 NU2 H26 H26 H 0 1 N N N -8.437 -1.516 128.284 -4.599 -0.266 -0.901 H26 NU2 62 NU2 H27 H27 H 0 1 N N N -6.761 3.722 132.672 -5.181 1.401 0.434 H27 NU2 63 NU2 H28 H28 H 0 1 N N N -5.998 2.226 133.310 -6.148 0.373 1.520 H28 NU2 64 NU2 H29 H29 H 0 1 N N N -3.782 1.509 131.993 -4.122 3.597 3.112 H29 NU2 65 NU2 H30 H30 H 0 1 N N N -3.696 2.302 130.384 -3.998 3.283 1.363 H30 NU2 66 NU2 H31 H31 H 0 1 N N N -3.233 -2.874 128.649 -3.455 1.583 -5.201 H31 NU2 67 NU2 H32 H32 H 0 1 N N N -4.251 -3.813 129.792 -1.953 2.316 -4.585 H32 NU2 68 NU2 H33 H33 H 0 1 N N N -4.230 -4.242 128.048 -1.924 0.678 -5.283 H33 NU2 69 NU2 H34 H34 H 0 1 N N N -10.581 2.075 124.135 2.691 -2.302 -2.010 H34 NU2 70 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal NU2 C29 C28 DOUB Y N 1 NU2 C29 C25 SING Y N 2 NU2 C28 C24 SING Y N 3 NU2 C25 C18 DOUB Y N 4 NU2 C24 C17 DOUB Y N 5 NU2 C18 C17 SING Y N 6 NU2 C18 C14 SING N N 7 NU2 C17 C13 SING N N 8 NU2 C14 C10 SING N N 9 NU2 C21 C27 SING N N 10 NU2 C21 C16 SING N N 11 NU2 C13 C10 SING N N 12 NU2 C10 C11 SING N N 13 NU2 C16 C22 SING N N 14 NU2 C16 C12 SING N N 15 NU2 N07 C19 SING N N 16 NU2 N07 C11 SING N N 17 NU2 O02 C19 DOUB N N 18 NU2 C19 C12 SING N N 19 NU2 C11 C15 SING N N 20 NU2 C12 N06 SING N N 21 NU2 C15 N06 SING N N 22 NU2 C15 O01 DOUB N N 23 NU2 N06 C20 SING N N 24 NU2 C20 C26 SING N N 25 NU2 C20 C23 SING N N 26 NU2 C26 N09 SING Y N 27 NU2 C26 C32 DOUB Y N 28 NU2 N09 C35 DOUB Y N 29 NU2 C32 O05 SING Y N 30 NU2 C35 O05 SING Y N 31 NU2 C35 C36 SING N N 32 NU2 O03 C23 DOUB N N 33 NU2 C23 N08 SING N N 34 NU2 N08 C31 SING N N 35 NU2 N08 C30 SING N N 36 NU2 C31 C34 SING N N 37 NU2 C34 O04 SING N N 38 NU2 C30 C33 SING N N 39 NU2 O04 C33 SING N N 40 NU2 C10 H1 SING N N 41 NU2 C13 H2 SING N N 42 NU2 C13 H3 SING N N 43 NU2 C20 H4 SING N N 44 NU2 C21 H5 SING N N 45 NU2 C21 H6 SING N N 46 NU2 C22 H7 SING N N 47 NU2 C22 H8 SING N N 48 NU2 C22 H9 SING N N 49 NU2 C24 H10 SING N N 50 NU2 C28 H11 SING N N 51 NU2 C11 H12 SING N N 52 NU2 C12 H13 SING N N 53 NU2 C14 H14 SING N N 54 NU2 C14 H15 SING N N 55 NU2 C16 H16 SING N N 56 NU2 C25 H17 SING N N 57 NU2 C27 H18 SING N N 58 NU2 C27 H19 SING N N 59 NU2 C27 H20 SING N N 60 NU2 C29 H21 SING N N 61 NU2 C30 H22 SING N N 62 NU2 C30 H23 SING N N 63 NU2 C31 H24 SING N N 64 NU2 C31 H25 SING N N 65 NU2 C32 H26 SING N N 66 NU2 C33 H27 SING N N 67 NU2 C33 H28 SING N N 68 NU2 C34 H29 SING N N 69 NU2 C34 H30 SING N N 70 NU2 C36 H31 SING N N 71 NU2 C36 H32 SING N N 72 NU2 C36 H33 SING N N 73 NU2 N07 H34 SING N N 74 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor NU2 InChI InChI 1.03 "InChI=1S/C27H34N4O5/c1-4-16(2)23-25(32)29-22(20-13-18-7-5-6-8-19(18)14-20)26(33)31(23)24(21-15-36-17(3)28-21)27(34)30-9-11-35-12-10-30/h5-8,15-16,20,22-24H,4,9-14H2,1-3H3,(H,29,32)/t16-,22+,23+,24+/m0/s1" NU2 InChIKey InChI 1.03 PLVGDGRBPMVYPB-FDUHJNRSSA-N NU2 SMILES_CANONICAL CACTVS 3.385 "CC[C@H](C)[C@H]1N([C@@H](C(=O)N2CCOCC2)c3coc(C)n3)C(=O)[C@H](NC1=O)C4Cc5ccccc5C4" NU2 SMILES CACTVS 3.385 "CC[CH](C)[CH]1N([CH](C(=O)N2CCOCC2)c3coc(C)n3)C(=O)[CH](NC1=O)C4Cc5ccccc5C4" NU2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC[C@H](C)[C@@H]1C(=O)N[C@@H](C(=O)N1[C@H](c2coc(n2)C)C(=O)N3CCOCC3)C4Cc5ccccc5C4" NU2 SMILES "OpenEye OEToolkits" 2.0.7 "CCC(C)C1C(=O)NC(C(=O)N1C(c2coc(n2)C)C(=O)N3CCOCC3)C4Cc5ccccc5C4" # _pdbx_chem_comp_identifier.comp_id NU2 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{R},6~{R})-6-[(2~{S})-butan-2-yl]-3-(2,3-dihydro-1~{H}-inden-2-yl)-1-[(1~{R})-1-(2-methyl-1,3-oxazol-4-yl)-2-morpholin-4-yl-2-oxidanylidene-ethyl]piperazine-2,5-dione" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site NU2 "Create component" 2019-12-13 PDBE NU2 "Initial release" 2020-08-05 RCSB ##