data_OEQ # _chem_comp.id OEQ _chem_comp.name "Biapenem Enamine hydrolysis product" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H21 N4 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ;(2~{S},3~{R})-2-[(2~{S},3~{R})-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-[[(6~{R})-6,7-dihydro-5~{H}-pyrazolo[1,2 -a][1,2,4]triazol-4-ium-6-yl]sulfanyl]-3-methyl-2,3-dihydro-1~{H}-pyrrole-5-carboxylic acid ; _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2020-03-02 _chem_comp.pdbx_modified_date 2021-03-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 369.416 _chem_comp.one_letter_code ? _chem_comp.three_letter_code OEQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6Y6J _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal OEQ N2 N1 N 1 1 Y N N -28.970 -18.856 -0.629 -3.972 1.262 0.414 N2 OEQ 1 OEQ C3 C1 C 0 1 N N R -28.829 -18.492 -2.955 -2.555 -0.606 0.887 C3 OEQ 2 OEQ C4 C2 C 0 1 N N N -27.569 -17.940 -2.307 -4.007 -1.077 0.666 C4 OEQ 3 OEQ C6 C3 C 0 1 Y N N -29.338 -18.659 0.721 -4.668 2.276 -0.072 C6 OEQ 4 OEQ C7 C4 C 0 1 N N N -29.655 -19.210 -1.872 -2.727 0.912 1.111 C7 OEQ 5 OEQ C10 C5 C 0 1 N N S -27.838 -18.477 -8.190 2.014 0.421 1.036 C10 OEQ 6 OEQ C11 C6 C 0 1 N N S -28.290 -19.666 -9.068 3.017 1.237 0.218 C11 OEQ 7 OEQ C12 C7 C 0 1 N N R -28.562 -19.190 -10.494 4.434 0.957 0.723 C12 OEQ 8 OEQ N N2 N 0 1 Y N N -27.818 -18.160 -0.837 -4.717 0.102 0.153 N OEQ 9 OEQ C C8 C 0 1 N N N -26.033 -20.419 -5.585 0.876 -2.911 -0.112 C OEQ 10 OEQ O O1 O 0 1 N N N -24.817 -20.310 -5.865 -0.203 -3.323 -0.496 O OEQ 11 OEQ C1 C9 C 0 1 N N N -26.985 -19.486 -6.284 1.028 -1.549 0.241 C1 OEQ 12 OEQ C13 C10 C 0 1 N N N -29.686 -18.182 -10.574 5.437 1.773 -0.095 C13 OEQ 13 OEQ C14 C11 C 0 1 N N N -27.219 -20.749 -9.125 2.915 0.848 -1.234 C14 OEQ 14 OEQ C2 C12 C 0 1 N N N -28.223 -18.970 -5.919 0.060 -0.626 0.083 C2 OEQ 15 OEQ C5 C13 C 0 1 Y N N -27.486 -17.557 0.353 -5.814 0.490 -0.474 C5 OEQ 16 OEQ C8 C14 C 0 1 N N R -28.742 -18.054 -7.007 0.577 0.710 0.565 C8 OEQ 17 OEQ C9 C15 C 0 1 N N N -30.245 -18.164 -7.261 0.584 1.725 -0.579 C9 OEQ 18 OEQ N1 N3 N 0 1 Y N N -28.450 -17.884 1.302 -5.781 1.804 -0.602 N1 OEQ 19 OEQ N3 N4 N 0 1 N N N -26.648 -18.940 -7.484 2.203 -1.015 0.793 N3 OEQ 20 OEQ O1 O2 O 0 1 N N N -27.368 -18.602 -11.026 4.531 1.326 2.100 O1 OEQ 21 OEQ O2 O3 O 0 1 N N N -26.190 -20.512 -9.807 2.280 -0.128 -1.555 O2 OEQ 22 OEQ O3 O4 O 0 1 N N N -27.444 -21.821 -8.516 3.530 1.587 -2.171 O3 OEQ 23 OEQ O4 O5 O 0 1 N N N -26.510 -21.268 -4.786 1.928 -3.753 -0.021 O4 OEQ 24 OEQ S S1 S 0 1 N N N -28.518 -19.628 -4.341 -1.544 -0.926 -0.580 S OEQ 25 OEQ H1 H1 H 0 1 N N N -29.421 -17.662 -3.368 -2.123 -1.082 1.768 H1 OEQ 26 OEQ H2 H2 H 0 1 N N N -26.678 -18.490 -2.644 -4.036 -1.886 -0.063 H2 OEQ 27 OEQ H3 H3 H 0 1 N N N -27.446 -16.870 -2.531 -4.447 -1.401 1.610 H3 OEQ 28 OEQ H4 H4 H 0 1 N N N -30.211 -19.079 1.199 -4.374 3.315 -0.041 H4 OEQ 29 OEQ H5 H5 H 0 1 N N N -30.694 -18.848 -1.865 -1.887 1.456 0.680 H5 OEQ 30 OEQ H6 H6 H 0 1 N N N -29.647 -20.299 -2.029 -2.814 1.130 2.175 H6 OEQ 31 OEQ H7 H7 H 0 1 N N N -27.613 -17.605 -8.822 2.118 0.644 2.098 H7 OEQ 32 OEQ H8 H8 H 0 1 N N N -29.213 -20.091 -8.646 2.796 2.299 0.326 H8 OEQ 33 OEQ H9 H9 H 0 1 N N N -28.839 -20.065 -11.100 4.655 -0.105 0.615 H9 OEQ 34 OEQ H10 H10 H 0 1 N N N -30.607 -18.626 -10.167 5.216 2.835 0.013 H10 OEQ 35 OEQ H11 H11 H 0 1 N N N -29.420 -17.289 -9.989 6.447 1.573 0.264 H11 OEQ 36 OEQ H12 H12 H 0 1 N N N -29.849 -17.897 -11.624 5.364 1.491 -1.146 H12 OEQ 37 OEQ H13 H13 H 0 1 N N N -26.621 -16.933 0.523 -6.607 -0.157 -0.820 H13 OEQ 38 OEQ H14 H14 H 0 1 N N N -28.504 -17.014 -6.741 -0.029 1.075 1.395 H14 OEQ 39 OEQ H15 H15 H 0 1 N N N -30.794 -17.842 -6.364 0.962 1.250 -1.484 H15 OEQ 40 OEQ H16 H16 H 0 1 N N N -30.521 -17.522 -8.110 -0.430 2.083 -0.753 H16 OEQ 41 OEQ H17 H17 H 0 1 N N N -30.502 -19.208 -7.492 1.226 2.566 -0.316 H17 OEQ 42 OEQ H18 H18 H 0 1 N N N -26.184 -19.629 -8.040 3.012 -1.515 0.984 H18 OEQ 43 OEQ H19 H19 H 0 1 N N N -26.614 -19.108 -10.747 3.922 0.847 2.679 H19 OEQ 44 OEQ H20 H20 H 0 1 N N N -26.719 -22.420 -8.651 3.435 1.298 -3.089 H20 OEQ 45 OEQ H21 H21 H 0 1 N N N -25.808 -21.804 -4.436 1.727 -4.662 -0.283 H21 OEQ 46 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal OEQ O1 C12 SING N N 1 OEQ C13 C12 SING N N 2 OEQ C12 C11 SING N N 3 OEQ O2 C14 DOUB N N 4 OEQ C14 C11 SING N N 5 OEQ C14 O3 SING N N 6 OEQ C11 C10 SING N N 7 OEQ C10 N3 SING N N 8 OEQ C10 C8 SING N N 9 OEQ N3 C1 SING N N 10 OEQ C9 C8 SING N N 11 OEQ C8 C2 SING N N 12 OEQ C1 C2 DOUB N N 13 OEQ C1 C SING N N 14 OEQ C2 S SING N N 15 OEQ O C DOUB N N 16 OEQ C O4 SING N N 17 OEQ S C3 SING N N 18 OEQ C3 C4 SING N N 19 OEQ C3 C7 SING N N 20 OEQ C4 N SING N N 21 OEQ C7 N2 SING N N 22 OEQ N N2 SING Y N 23 OEQ N C5 SING Y N 24 OEQ N2 C6 DOUB Y N 25 OEQ C5 N1 DOUB Y N 26 OEQ C6 N1 SING Y N 27 OEQ C3 H1 SING N N 28 OEQ C4 H2 SING N N 29 OEQ C4 H3 SING N N 30 OEQ C6 H4 SING N N 31 OEQ C7 H5 SING N N 32 OEQ C7 H6 SING N N 33 OEQ C10 H7 SING N N 34 OEQ C11 H8 SING N N 35 OEQ C12 H9 SING N N 36 OEQ C13 H10 SING N N 37 OEQ C13 H11 SING N N 38 OEQ C13 H12 SING N N 39 OEQ C5 H13 SING N N 40 OEQ C8 H14 SING N N 41 OEQ C9 H15 SING N N 42 OEQ C9 H16 SING N N 43 OEQ C9 H17 SING N N 44 OEQ N3 H18 SING N N 45 OEQ O1 H19 SING N N 46 OEQ O3 H20 SING N N 47 OEQ O4 H21 SING N N 48 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor OEQ InChI InChI 1.03 "InChI=1S/C15H20N4O5S/c1-7-11(10(8(2)20)14(21)22)17-12(15(23)24)13(7)25-9-3-18-5-16-6-19(18)4-9/h5-11,17,20H,3-4H2,1-2H3,(H-,21,22,23,24)/p+1/t7-,8-,10-,11-/m1/s1" OEQ InChIKey InChI 1.03 NNMZLHRXLIBHJJ-YJFSRANCSA-O OEQ SMILES_CANONICAL CACTVS 3.385 "C[C@@H](O)[C@H]([C@@H]1NC(=C(S[C@@H]2Cn3cnc[n+]3C2)[C@@H]1C)C(O)=O)C(O)=O" OEQ SMILES CACTVS 3.385 "C[CH](O)[CH]([CH]1NC(=C(S[CH]2Cn3cnc[n+]3C2)[CH]1C)C(O)=O)C(O)=O" OEQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H]1[C@@H](NC(=C1S[C@@H]2Cn3cnc[n+]3C2)C(=O)O)[C@@H]([C@@H](C)O)C(=O)O" OEQ SMILES "OpenEye OEToolkits" 2.0.7 "CC1C(NC(=C1SC2Cn3cnc[n+]3C2)C(=O)O)C(C(C)O)C(=O)O" # _pdbx_chem_comp_identifier.comp_id OEQ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},3~{R})-2-[(2~{S},3~{R})-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-[[(6~{R})-6,7-dihydro-5~{H}-pyrazolo[1,2-a][1,2,4]triazol-4-ium-6-yl]sulfanyl]-3-methyl-2,3-dihydro-1~{H}-pyrrole-5-carboxylic acid" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id OEQ _pdbx_chem_comp_synonyms.name "(2~{S},3~{R})-2-[(2~{S},3~{R})-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-[[(6~{R})-6,7-dihydro-5~{H}-pyrazolo[1,2-a][1,2,4]triazol-4-ium-6-yl]sulfanyl]-3-methyl-2,3-dihydro-1~{H}-pyrrole-5-carboxylic acid" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site OEQ "Create component" 2020-03-02 PDBE OEQ "Modify synonyms" 2020-06-05 PDBE OEQ "Initial release" 2021-03-31 RCSB ##