data_OP3 # _chem_comp.id OP3 _chem_comp.name "7-methoxy-7-oxidanylidene-heptanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H14 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-02-09 _chem_comp.pdbx_modified_date 2024-01-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 174.194 _chem_comp.one_letter_code ? _chem_comp.three_letter_code OP3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8I51 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal OP3 CAA C1 C 0 1 N N N N N N 131.481 127.479 157.962 5.597 -0.300 0.000 CAA OP3 1 OP3 CAL C2 C 0 1 N N N N N N 137.473 125.916 158.015 -0.512 0.797 -0.001 CAL OP3 2 OP3 CAM C3 C 0 1 N N N N N N 135.987 125.715 157.734 0.753 -0.064 0.000 CAM OP3 3 OP3 CAN C4 C 0 1 N N N N N N 138.318 124.740 157.531 -1.745 -0.109 0.000 CAN OP3 4 OP3 CAR C5 C 0 1 N N N N N N 135.138 126.864 158.267 1.986 0.842 -0.001 CAR OP3 5 OP3 CAT C6 C 0 1 N N N N N N 139.809 124.975 157.763 -3.010 0.751 -0.001 CAT OP3 6 OP3 OAE O1 O 0 1 N N N N N N 133.300 125.664 157.433 3.143 -1.211 0.001 OAE OP3 7 OP3 OAX O2 O 0 1 N N N N N N 132.701 127.450 158.644 4.441 0.578 -0.000 OAX OP3 8 OP3 CBB C7 C 0 1 N N N N N N 133.650 126.596 158.072 3.232 -0.006 0.000 CBB OP3 9 OP3 CBC C8 C 0 1 N N N N N N 140.673 123.817 157.270 -4.225 -0.141 0.000 CBC OP3 10 OP3 O25 O3 O 0 1 N N N N N N 139.839 122.818 156.753 -4.092 -1.342 0.001 O25 OP3 11 OP3 O1 O4 O 0 1 N Y N N N N 142.134 124.542 157.240 -5.454 0.399 -0.000 O1 OP3 12 OP3 H1 H1 H 0 1 N N N N N N 130.792 128.169 158.471 5.576 -0.929 0.891 H1 OP3 13 OP3 H2 H2 H 0 1 N N N N N N 131.646 127.821 156.930 5.576 -0.930 -0.889 H2 OP3 14 OP3 H3 H3 H 0 1 N N N N N N 131.044 126.469 157.949 6.508 0.298 -0.000 H3 OP3 15 OP3 H4 H4 H 0 1 N N N N N N 137.616 126.031 159.100 -0.523 1.426 0.889 H4 OP3 16 OP3 H5 H5 H 0 1 N N N N N N 137.810 126.829 157.502 -0.523 1.425 -0.891 H5 OP3 17 OP3 H6 H6 H 0 1 N N N N N N 135.839 125.641 156.646 0.765 -0.692 0.891 H6 OP3 18 OP3 H7 H7 H 0 1 N N N N N N 135.659 124.781 158.213 0.765 -0.694 -0.890 H7 OP3 19 OP3 H8 H8 H 0 1 N N N N N N 138.144 124.597 156.454 -1.734 -0.739 -0.890 H8 OP3 20 OP3 H9 H9 H 0 1 N N N N N N 138.012 123.835 158.076 -1.734 -0.738 0.891 H9 OP3 21 OP3 H10 H10 H 0 1 N N N N N N 135.341 126.990 159.341 1.975 1.471 -0.891 H10 OP3 22 OP3 H11 H11 H 0 1 N N N N N N 135.408 127.786 157.732 1.975 1.472 0.889 H11 OP3 23 OP3 H12 H12 H 0 1 N N N N N N 139.981 125.107 158.841 -3.021 1.381 0.889 H12 OP3 24 OP3 H13 H13 H 0 1 N N N N N N 140.108 125.889 157.229 -3.021 1.380 -0.891 H13 OP3 25 OP3 H14 H14 H 0 1 N N N N N N 142.685 124.118 156.592 -6.202 -0.214 0.000 H14 OP3 26 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal OP3 O25 CBC DOUB N N 1 OP3 CBC CAT SING N N 2 OP3 OAE CBB DOUB N N 3 OP3 CAN CAT SING N N 4 OP3 CAN CAL SING N N 5 OP3 CAM CAL SING N N 6 OP3 CAM CAR SING N N 7 OP3 CAA OAX SING N N 8 OP3 CBB CAR SING N N 9 OP3 CBB OAX SING N N 10 OP3 CBC O1 SING N N 11 OP3 CAA H1 SING N N 12 OP3 CAA H2 SING N N 13 OP3 CAA H3 SING N N 14 OP3 CAL H4 SING N N 15 OP3 CAL H5 SING N N 16 OP3 CAM H6 SING N N 17 OP3 CAM H7 SING N N 18 OP3 CAN H8 SING N N 19 OP3 CAN H9 SING N N 20 OP3 CAR H10 SING N N 21 OP3 CAR H11 SING N N 22 OP3 CAT H12 SING N N 23 OP3 CAT H13 SING N N 24 OP3 O1 H14 SING N N 25 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor OP3 InChI InChI 1.06 "InChI=1S/C8H14O4/c1-12-8(11)6-4-2-3-5-7(9)10/h2-6H2,1H3,(H,9,10)" OP3 InChIKey InChI 1.06 YOLQOHRXBGFZED-UHFFFAOYSA-N OP3 SMILES_CANONICAL CACTVS 3.385 "COC(=O)CCCCCC(O)=O" OP3 SMILES CACTVS 3.385 "COC(=O)CCCCCC(O)=O" OP3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COC(=O)CCCCCC(=O)O" OP3 SMILES "OpenEye OEToolkits" 2.0.7 "COC(=O)CCCCCC(=O)O" # _pdbx_chem_comp_identifier.comp_id OP3 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "7-methoxy-7-oxidanylidene-heptanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site OP3 "Create component" 2023-02-09 PDBJ OP3 "Initial release" 2024-01-24 RCSB #