data_OPV # _chem_comp.id OPV _chem_comp.name "~{N}-[(4~{S},5~{S})-2-[2-(1~{H}-imidazol-4-yl)ethyl]-5-methyl-3-oxidanylidene-1,2-oxazolidin-4-yl]-2,3-bis(oxidanyl)benzamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H18 N4 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-07-31 _chem_comp.pdbx_modified_date 2018-10-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 346.338 _chem_comp.one_letter_code ? _chem_comp.three_letter_code OPV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6H7F _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal OPV CAJ C1 C 0 1 Y N N -70.567 44.027 3.690 5.838 1.706 0.724 CAJ OPV 1 OPV NAM N1 N 0 1 Y N N -71.543 44.823 3.250 6.927 2.136 0.015 NAM OPV 2 OPV CAI C2 C 0 1 Y N N -71.432 44.924 1.921 7.002 1.379 -1.101 CAI OPV 3 OPV NAO N2 N 0 1 Y N N -70.387 44.190 1.530 6.016 0.524 -1.093 NAO OPV 4 OPV CAT C3 C 0 1 Y N N -69.869 43.643 2.625 5.288 0.699 0.019 CAT OPV 5 OPV CAK C4 C 0 1 N N N -68.635 42.714 2.657 4.062 -0.088 0.408 CAK OPV 6 OPV CAL C5 C 0 1 N N N -69.067 41.236 2.622 3.033 -0.020 -0.722 CAL OPV 7 OPV NAY N3 N 0 1 N N N -69.560 40.750 3.962 1.842 -0.785 -0.343 NAY OPV 8 OPV C C6 C 0 1 N N N -70.771 40.979 4.468 0.922 -0.362 0.547 C OPV 9 OPV O O1 O 0 1 N N N -71.656 41.610 3.891 0.931 0.697 1.138 O OPV 10 OPV OG1 O2 O 0 1 N N N -68.761 39.896 4.995 1.512 -2.055 -0.872 OG1 OPV 11 OPV CB C7 C 0 1 N N S -69.561 39.947 6.191 0.566 -2.673 0.021 CB OPV 12 OPV CG2 C8 C 0 1 N N N -68.995 40.970 7.182 1.286 -3.519 1.073 CG2 OPV 13 OPV CA C9 C 0 1 N N S -70.957 40.359 5.697 -0.126 -1.452 0.673 CA OPV 14 OPV N N4 N 0 1 N N N -71.823 39.169 5.508 -1.339 -1.093 -0.065 N OPV 15 OPV CAQ C10 C 0 1 N N N -73.018 39.113 6.107 -2.292 -0.346 0.527 CAQ OPV 16 OPV OAB O3 O 0 1 N N N -73.377 39.974 6.902 -2.145 0.030 1.674 OAB OPV 17 OPV CAV C11 C 0 1 Y N N -73.791 37.954 5.965 -3.514 0.015 -0.216 CAV OPV 18 OPV CAH C12 C 0 1 Y N N -74.788 37.757 6.934 -3.687 -0.415 -1.535 CAH OPV 19 OPV CAF C13 C 0 1 Y N N -75.606 36.621 6.910 -4.830 -0.075 -2.225 CAF OPV 20 OPV CAG C14 C 0 1 Y N N -75.435 35.658 5.905 -5.812 0.691 -1.620 CAG OPV 21 OPV CAS C15 C 0 1 Y N N -74.443 35.853 4.948 -5.655 1.125 -0.314 CAS OPV 22 OPV OAD O4 O 0 1 N N N -74.204 35.004 3.936 -6.626 1.873 0.275 OAD OPV 23 OPV CAU C16 C 0 1 Y N N -73.635 36.970 4.970 -4.509 0.786 0.398 CAU OPV 24 OPV OAE O5 O 0 1 N N N -72.701 37.065 3.968 -4.352 1.209 1.678 OAE OPV 25 OPV H1 H1 H 0 1 N N N -70.379 43.747 4.716 5.490 2.096 1.668 H1 OPV 26 OPV H2 H2 H 0 1 N N N -72.237 45.267 3.816 7.533 2.850 0.267 H2 OPV 27 OPV H3 H3 H 0 1 N N N -72.077 45.501 1.275 7.753 1.467 -1.873 H3 OPV 28 OPV H5 H5 H 0 1 N N N -68.065 42.902 3.579 4.339 -1.127 0.586 H5 OPV 29 OPV H6 H6 H 0 1 N N N -68.001 42.926 1.784 3.633 0.334 1.317 H6 OPV 30 OPV H7 H7 H 0 1 N N N -69.876 41.122 1.885 2.756 1.019 -0.899 H7 OPV 31 OPV H8 H8 H 0 1 N N N -68.205 40.623 2.319 3.462 -0.442 -1.630 H8 OPV 32 OPV H9 H9 H 0 1 N N N -69.616 38.959 6.671 -0.152 -3.276 -0.533 H9 OPV 33 OPV H10 H10 H 0 1 N N N -69.621 40.991 8.086 1.974 -2.890 1.637 H10 OPV 34 OPV H11 H11 H 0 1 N N N -67.968 40.687 7.455 0.553 -3.955 1.752 H11 OPV 35 OPV H12 H12 H 0 1 N N N -68.989 41.967 6.717 1.843 -4.315 0.580 H12 OPV 36 OPV H13 H13 H 0 1 N N N -71.413 41.044 6.427 -0.354 -1.648 1.721 H13 OPV 37 OPV H14 H14 H 0 1 N N N -71.514 38.411 4.934 -1.457 -1.393 -0.980 H14 OPV 38 OPV H15 H15 H 0 1 N N N -74.926 38.494 7.711 -2.925 -1.013 -2.012 H15 OPV 39 OPV H16 H16 H 0 1 N N N -76.367 36.487 7.664 -4.961 -0.409 -3.244 H16 OPV 40 OPV H17 H17 H 0 1 N N N -76.063 34.780 5.874 -6.705 0.953 -2.169 H17 OPV 41 OPV H18 H18 H 0 1 N N N -74.800 34.266 3.994 -6.512 2.826 0.161 H18 OPV 42 OPV H19 H19 H 0 1 N N N -72.201 37.866 4.075 -4.704 0.598 2.340 H19 OPV 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal OPV NAO CAI DOUB Y N 1 OPV NAO CAT SING Y N 2 OPV CAI NAM SING Y N 3 OPV CAL CAK SING N N 4 OPV CAL NAY SING N N 5 OPV CAT CAK SING N N 6 OPV CAT CAJ DOUB Y N 7 OPV NAM CAJ SING Y N 8 OPV O C DOUB N N 9 OPV OAD CAS SING N N 10 OPV NAY C SING N N 11 OPV NAY OG1 SING N N 12 OPV OAE CAU SING N N 13 OPV C CA SING N N 14 OPV CAS CAU DOUB Y N 15 OPV CAS CAG SING Y N 16 OPV CAU CAV SING Y N 17 OPV OG1 CB SING N N 18 OPV N CA SING N N 19 OPV N CAQ SING N N 20 OPV CA CB SING N N 21 OPV CAG CAF DOUB Y N 22 OPV CAV CAQ SING N N 23 OPV CAV CAH DOUB Y N 24 OPV CAQ OAB DOUB N N 25 OPV CB CG2 SING N N 26 OPV CAF CAH SING Y N 27 OPV CAJ H1 SING N N 28 OPV NAM H2 SING N N 29 OPV CAI H3 SING N N 30 OPV CAK H5 SING N N 31 OPV CAK H6 SING N N 32 OPV CAL H7 SING N N 33 OPV CAL H8 SING N N 34 OPV CB H9 SING N N 35 OPV CG2 H10 SING N N 36 OPV CG2 H11 SING N N 37 OPV CG2 H12 SING N N 38 OPV CA H13 SING N N 39 OPV N H14 SING N N 40 OPV CAH H15 SING N N 41 OPV CAF H16 SING N N 42 OPV CAG H17 SING N N 43 OPV OAD H18 SING N N 44 OPV OAE H19 SING N N 45 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor OPV InChI InChI 1.03 "InChI=1S/C16H18N4O5/c1-9-13(19-15(23)11-3-2-4-12(21)14(11)22)16(24)20(25-9)6-5-10-7-17-8-18-10/h2-4,7-9,13,21-22H,5-6H2,1H3,(H,17,18)(H,19,23)/t9-,13-/m0/s1" OPV InChIKey InChI 1.03 YQXURFXJBIFMOA-ZANVPECISA-N OPV SMILES_CANONICAL CACTVS 3.385 "C[C@@H]1ON(CCc2c[nH]cn2)C(=O)[C@H]1NC(=O)c3cccc(O)c3O" OPV SMILES CACTVS 3.385 "C[CH]1ON(CCc2c[nH]cn2)C(=O)[CH]1NC(=O)c3cccc(O)c3O" OPV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C[C@H]1[C@@H](C(=O)N(O1)CCc2c[nH]cn2)NC(=O)c3cccc(c3O)O" OPV SMILES "OpenEye OEToolkits" 2.0.6 "CC1C(C(=O)N(O1)CCc2c[nH]cn2)NC(=O)c3cccc(c3O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier OPV "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "~{N}-[(4~{S},5~{S})-2-[2-(1~{H}-imidazol-4-yl)ethyl]-5-methyl-3-oxidanylidene-1,2-oxazolidin-4-yl]-2,3-bis(oxidanyl)benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site OPV "Create component" 2018-07-31 EBI OPV "Initial release" 2018-10-10 RCSB #