data_OYO # _chem_comp.id OYO _chem_comp.name "(3~{a}~{S},5~{R},6~{R},6~{a}~{S})-5-(hydroxymethyl)-2,2-dimethyl-3~{a},5,6,6~{a}-tetrahydrofuro[2,3-d][1,3]dioxol-6-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H14 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-02-24 _chem_comp.pdbx_modified_date 2023-08-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 190.194 _chem_comp.one_letter_code ? _chem_comp.three_letter_code OYO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8IC1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal OYO C4 C1 C 0 1 N N S -3.545 -19.992 16.875 -0.359 0.312 -1.215 C4 OYO 1 OYO C5 C2 C 0 1 N N R -5.207 -19.321 15.315 1.749 0.088 -0.264 C5 OYO 2 OYO C6 C3 C 0 1 N N N -5.445 -20.315 14.205 2.434 -0.855 0.728 C6 OYO 3 OYO C7 C4 C 0 1 N N R -4.004 -18.455 15.035 1.079 1.234 0.503 C7 OYO 4 OYO C8 C5 C 0 1 N N S -2.839 -19.148 15.804 -0.403 1.188 0.075 C8 OYO 5 OYO C3 C6 C 0 1 N N N -1.961 -22.596 14.887 -2.267 -1.783 0.701 C3 OYO 6 OYO C1 C7 C 0 1 N N N -0.600 -21.234 16.451 -3.429 0.380 0.229 C1 OYO 7 OYO C2 C8 C 0 1 N N N -1.927 -21.327 15.718 -2.089 -0.356 0.178 C2 OYO 8 OYO O1 O1 O 0 1 N N N -3.068 -21.308 16.629 -1.613 -0.395 -1.173 O1 OYO 9 OYO O2 O2 O 0 1 N N N -4.957 -19.914 16.634 0.717 -0.614 -0.971 O2 OYO 10 OYO O3 O3 O 0 1 N N N -6.220 -21.411 14.677 3.137 -1.872 0.010 O3 OYO 11 OYO O4 O4 O 0 1 N N N -4.345 -17.220 15.675 1.643 2.489 0.116 O4 OYO 12 OYO O5 O5 O 0 1 N N N -2.151 -20.103 14.982 -1.129 0.338 0.989 O5 OYO 13 OYO H1 H1 H 0 1 N N N -3.279 -19.636 17.881 -0.225 0.893 -2.127 H1 OYO 14 OYO H2 H2 H 0 1 N N N -6.090 -18.668 15.385 2.482 0.478 -0.970 H2 OYO 15 OYO H3 H3 H 0 1 N N N -4.477 -20.687 13.838 3.136 -0.291 1.340 H3 OYO 16 OYO H4 H4 H 0 1 N N N -5.982 -19.819 13.383 1.682 -1.316 1.368 H4 OYO 17 OYO H5 H5 H 0 1 N N N -3.789 -18.359 13.960 1.186 1.086 1.577 H5 OYO 18 OYO H6 H6 H 0 1 N N N -2.165 -18.405 16.256 -0.846 2.172 -0.072 H6 OYO 19 OYO H7 H7 H 0 1 N N N -1.781 -23.465 15.537 -3.003 -2.305 0.089 H7 OYO 20 OYO H8 H8 H 0 1 N N N -2.946 -22.694 14.408 -1.314 -2.310 0.651 H8 OYO 21 OYO H9 H9 H 0 1 N N N -1.181 -22.548 14.113 -2.611 -1.751 1.734 H9 OYO 22 OYO H10 H10 H 0 1 N N N -0.577 -20.314 17.053 -3.780 0.425 1.260 H10 OYO 23 OYO H11 H11 H 0 1 N N N -0.484 -22.107 17.111 -3.303 1.392 -0.155 H11 OYO 24 OYO H12 H12 H 0 1 N N N 0.222 -21.215 15.720 -4.160 -0.151 -0.380 H12 OYO 25 OYO H13 H13 H 0 1 N N N -6.362 -22.028 13.968 3.596 -2.507 0.577 H13 OYO 26 OYO H14 H14 H 0 1 N N N -3.639 -16.595 15.555 2.588 2.570 0.303 H14 OYO 27 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal OYO C6 O3 SING N N 1 OYO C6 C5 SING N N 2 OYO C3 C2 SING N N 3 OYO O5 C2 SING N N 4 OYO O5 C8 SING N N 5 OYO C7 C5 SING N N 6 OYO C7 O4 SING N N 7 OYO C7 C8 SING N N 8 OYO C5 O2 SING N N 9 OYO C2 C1 SING N N 10 OYO C2 O1 SING N N 11 OYO C8 C4 SING N N 12 OYO O1 C4 SING N N 13 OYO O2 C4 SING N N 14 OYO C4 H1 SING N N 15 OYO C5 H2 SING N N 16 OYO C6 H3 SING N N 17 OYO C6 H4 SING N N 18 OYO C7 H5 SING N N 19 OYO C8 H6 SING N N 20 OYO C3 H7 SING N N 21 OYO C3 H8 SING N N 22 OYO C3 H9 SING N N 23 OYO C1 H10 SING N N 24 OYO C1 H11 SING N N 25 OYO C1 H12 SING N N 26 OYO O3 H13 SING N N 27 OYO O4 H14 SING N N 28 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor OYO InChI InChI 1.06 "InChI=1S/C8H14O5/c1-8(2)12-6-5(10)4(3-9)11-7(6)13-8/h4-7,9-10H,3H2,1-2H3/t4-,5-,6+,7+/m1/s1" OYO InChIKey InChI 1.06 JAUQZVBVVJJRKM-JWXFUTCRSA-N OYO SMILES_CANONICAL CACTVS 3.385 "CC1(C)O[C@@H]2O[C@H](CO)[C@@H](O)[C@@H]2O1" OYO SMILES CACTVS 3.385 "CC1(C)O[CH]2O[CH](CO)[CH](O)[CH]2O1" OYO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1(O[C@H]2[C@@H]([C@H](O[C@H]2O1)CO)O)C" OYO SMILES "OpenEye OEToolkits" 2.0.7 "CC1(OC2C(C(OC2O1)CO)O)C" # _pdbx_chem_comp_identifier.comp_id OYO _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{a}~{S},5~{R},6~{R},6~{a}~{S})-5-(hydroxymethyl)-2,2-dimethyl-3~{a},5,6,6~{a}-tetrahydrofuro[2,3-d][1,3]dioxol-6-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site OYO "Create component" 2023-02-24 PDBJ OYO "Initial release" 2023-08-16 RCSB #