data_P0O # _chem_comp.id P0O _chem_comp.name "(1R,2S,5S)-3-[(2S)-2-(tert-butylcarbamoylamino)-3,3-dimethyl-butanoyl]-6,6-dimethyl-N-[(2S)-5-oxidanylidene-1-[(3S)-2-oxidanylidenepyrrolidin-3-yl]hex-3-en-2-yl]-3-azabicyclo[3.1.0]hexane-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H47 N5 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-02-28 _chem_comp.pdbx_modified_date 2023-10-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 545.714 _chem_comp.one_letter_code ? _chem_comp.three_letter_code P0O _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8IFR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal P0O N1 N1 N 0 1 N N N -19.648 16.218 -25.595 -0.377 0.640 -0.233 N1 P0O 1 P0O N3 N2 N 0 1 N N N -16.683 22.300 -24.281 3.908 -3.595 -1.899 N3 P0O 2 P0O C4 C1 C 0 1 N N S -19.995 16.650 -23.201 -2.649 0.038 0.539 C4 P0O 3 P0O C5 C2 C 0 1 N N N -19.162 16.778 -24.477 -1.370 -0.271 -0.196 C5 P0O 4 P0O C6 C3 C 0 1 N N N -20.894 15.443 -25.714 -0.386 2.016 0.316 C6 P0O 5 P0O C7 C4 C 0 1 N N S -20.837 14.850 -27.109 0.358 2.861 -0.740 C7 P0O 6 P0O C8 C5 C 0 1 N N S -18.924 16.378 -26.856 0.971 0.490 -0.826 C8 P0O 7 P0O C10 C6 C 0 1 N N S -17.622 19.705 -28.161 4.174 -0.601 0.965 C10 P0O 8 P0O C13 C7 C 0 1 N N N -18.653 20.318 -31.765 5.418 3.006 0.913 C13 P0O 9 P0O C15 C8 C 0 1 N N N -16.541 20.406 -27.328 5.115 -1.712 0.496 C15 P0O 10 P0O C17 C9 C 0 1 N N N -18.289 21.575 -25.806 5.278 -4.181 -0.020 C17 P0O 11 P0O C20 C10 C 0 1 N N R -19.661 15.480 -27.834 1.251 1.857 -1.497 C20 P0O 12 P0O C21 C11 C 0 1 N N N -19.678 13.999 -27.536 0.064 2.591 -2.217 C21 P0O 13 P0O C22 C12 C 0 1 N N N -18.839 13.361 -26.447 -1.177 1.762 -2.556 C22 P0O 14 P0O C24 C13 C 0 1 N N N -19.499 14.980 -21.486 -5.017 -0.283 0.060 C24 P0O 15 P0O C26 C14 C 0 1 N N N -19.930 13.121 -19.044 -7.523 0.876 -1.013 C26 P0O 16 P0O C28 C15 C 0 1 N N N -17.461 13.332 -18.811 -7.781 -0.402 1.119 C28 P0O 17 P0O C1 C16 C 0 1 N N N -21.427 18.606 -23.890 -2.154 -1.832 2.120 C1 P0O 18 P0O C11 C17 C 0 1 N N N -17.376 19.816 -29.665 4.970 0.648 1.244 C11 P0O 19 P0O C12 C18 C 0 1 N N N -18.317 19.535 -30.558 4.646 1.794 0.643 C12 P0O 20 P0O C14 C19 C 0 1 N N N -19.879 19.946 -32.553 5.052 4.301 0.234 C14 P0O 21 P0O C16 C20 C 0 1 N N S -17.058 20.674 -25.901 4.327 -3.013 0.333 C16 P0O 22 P0O C18 C21 C 0 1 N N N -18.132 22.289 -24.465 5.208 -4.187 -1.564 C18 P0O 23 P0O C19 C22 C 0 1 N N N -16.052 21.366 -24.995 3.395 -2.921 -0.855 C19 P0O 24 P0O C2 C23 C 0 1 N N N -20.622 17.983 -22.748 -2.497 -0.345 2.012 C2 P0O 25 P0O C23 C24 C 0 1 N N N -19.860 13.097 -28.739 0.419 3.686 -3.225 C23 P0O 26 P0O C25 C25 C 0 1 N N N -18.622 13.325 -19.794 -7.406 -0.503 -0.361 C25 P0O 27 P0O C27 C26 C 0 1 N N N -18.421 12.222 -20.824 -8.354 -1.480 -1.061 C27 P0O 28 P0O C29 C27 C 0 1 N N N -21.557 17.738 -21.559 -1.374 0.484 2.641 C29 P0O 29 P0O C3 C28 C 0 1 N N N -19.541 18.973 -22.304 -3.809 -0.069 2.750 C3 P0O 30 P0O C9 C29 C 0 1 N N N -18.946 17.839 -27.297 1.990 0.207 0.248 C9 P0O 31 P0O N2 N3 N 0 1 N N N -17.788 18.316 -27.772 3.184 -0.326 -0.079 N2 P0O 32 P0O N4 N4 N 0 1 N N N -19.155 16.103 -22.149 -3.749 -0.727 -0.053 N4 P0O 33 P0O N5 N5 N 0 1 N N N -18.648 14.619 -20.505 -6.029 -0.987 -0.484 N5 P0O 34 P0O O1 O1 O 0 1 N N N -17.956 21.269 -32.148 6.354 2.969 1.684 O1 P0O 35 P0O O2 O2 O 0 1 N N N -14.841 21.092 -24.916 2.337 -2.329 -0.864 O2 P0O 36 P0O O3 O3 O 0 1 N N N -19.951 18.537 -27.151 1.735 0.459 1.407 O3 P0O 37 P0O O4 O4 O 0 1 N N N -18.078 17.362 -24.487 -1.234 -1.339 -0.753 O4 P0O 38 P0O O5 O5 O 0 1 N N N -20.551 14.375 -21.762 -5.247 0.753 0.654 O5 P0O 39 P0O H1 H1 H 0 1 N N N -16.211 22.944 -23.679 3.477 -3.675 -2.764 H1 P0O 40 P0O H2 H2 H 0 1 N N N -20.815 15.946 -23.403 -2.865 1.104 0.461 H2 P0O 41 P0O H3 H3 H 0 1 N N N -21.771 16.097 -25.605 -1.409 2.371 0.436 H3 P0O 42 P0O H4 H4 H 0 1 N N N -20.932 14.648 -24.954 0.141 2.047 1.270 H4 P0O 43 P0O H5 H5 H 0 1 N N N -21.783 14.750 -27.661 0.726 3.841 -0.436 H5 P0O 44 P0O H6 H6 H 0 1 N N N -17.883 16.038 -26.750 0.973 -0.307 -1.570 H6 P0O 45 P0O H7 H7 H 0 1 N N N -18.569 20.226 -27.954 3.664 -0.917 1.875 H7 P0O 46 P0O H8 H8 H 0 1 N N N -15.649 19.764 -27.277 5.558 -1.433 -0.460 H8 P0O 47 P0O H9 H9 H 0 1 N N N -16.278 21.362 -27.805 5.904 -1.855 1.234 H9 P0O 48 P0O H10 H10 H 0 1 N N N -18.306 22.300 -26.633 6.292 -3.975 0.324 H10 P0O 49 P0O H11 H11 H 0 1 N N N -19.212 20.977 -25.823 4.913 -5.123 0.390 H11 P0O 50 P0O H12 H12 H 0 1 N N N -19.794 15.819 -28.872 2.278 2.092 -1.778 H12 P0O 51 P0O H13 H13 H 0 1 N N N -18.741 14.059 -25.602 -1.603 1.355 -1.639 H13 P0O 52 P0O H14 H14 H 0 1 N N N -19.326 12.436 -26.104 -1.914 2.396 -3.049 H14 P0O 53 P0O H15 H15 H 0 1 N N N -17.841 13.124 -26.844 -0.897 0.945 -3.221 H15 P0O 54 P0O H16 H16 H 0 1 N N N -20.059 13.926 -18.305 -6.848 1.572 -0.514 H16 P0O 55 P0O H17 H17 H 0 1 N N N -20.768 13.140 -19.756 -7.256 0.804 -2.067 H17 P0O 56 P0O H18 H18 H 0 1 N N N -19.909 12.150 -18.528 -8.548 1.235 -0.921 H18 P0O 57 P0O H19 H19 H 0 1 N N N -17.612 14.131 -18.070 -8.806 -0.043 1.210 H19 P0O 58 P0O H20 H20 H 0 1 N N N -17.410 12.361 -18.298 -7.698 -1.385 1.583 H20 P0O 59 P0O H21 H21 H 0 1 N N N -16.521 13.510 -19.355 -7.106 0.294 1.617 H21 P0O 60 P0O H22 H22 H 0 1 N N N -21.868 19.556 -23.553 -1.219 -2.029 1.595 H22 P0O 61 P0O H23 H23 H 0 1 N N N -20.763 18.794 -24.747 -2.045 -2.105 3.170 H23 P0O 62 P0O H24 H24 H 0 1 N N N -22.229 17.916 -24.192 -2.954 -2.422 1.672 H24 P0O 63 P0O H25 H25 H 0 1 N N N -16.404 20.134 -30.013 5.803 0.615 1.931 H25 P0O 64 P0O H27 H27 H 0 1 N N N -18.897 18.641 -30.384 3.812 1.827 -0.044 H27 P0O 65 P0O H29 H29 H 0 1 N N N -19.981 20.623 -33.414 4.332 4.842 0.848 H29 P0O 66 P0O H30 H30 H 0 1 N N N -19.785 18.910 -32.910 5.947 4.908 0.103 H30 P0O 67 P0O H31 H31 H 0 1 N N N -20.768 20.033 -31.911 4.612 4.088 -0.740 H31 P0O 68 P0O H32 H32 H 0 1 N N N -17.313 19.704 -25.449 3.769 -3.237 1.242 H32 P0O 69 P0O H33 H33 H 0 1 N N N -18.535 23.312 -24.509 5.266 -5.209 -1.940 H33 P0O 70 P0O H34 H34 H 0 1 N N N -18.631 21.733 -23.658 6.016 -3.586 -1.980 H34 P0O 71 P0O H35 H35 H 0 1 N N N -19.858 12.046 -28.414 1.023 3.260 -4.026 H35 P0O 72 P0O H36 H36 H 0 1 N N N -20.818 13.327 -29.228 -0.496 4.106 -3.643 H36 P0O 73 P0O H37 H37 H 0 1 N N N -19.036 13.262 -29.449 0.984 4.472 -2.723 H37 P0O 74 P0O H38 H38 H 0 1 N N N -18.398 11.246 -20.317 -8.087 -1.552 -2.116 H38 P0O 75 P0O H39 H39 H 0 1 N N N -19.250 12.240 -21.547 -8.271 -2.463 -0.597 H39 P0O 76 P0O H40 H40 H 0 1 N N N -17.470 12.383 -21.352 -9.379 -1.120 -0.970 H40 P0O 77 P0O H41 H41 H 0 1 N N N -20.988 17.290 -20.731 -1.636 1.541 2.599 H41 P0O 78 P0O H42 H42 H 0 1 N N N -21.991 18.694 -21.231 -1.240 0.184 3.680 H42 P0O 79 P0O H43 H43 H 0 1 N N N -22.364 17.054 -21.862 -0.448 0.316 2.092 H43 P0O 80 P0O H44 H44 H 0 1 N N N -18.956 18.534 -21.482 -4.608 -0.659 2.302 H44 P0O 81 P0O H45 H45 H 0 1 N N N -18.875 19.193 -23.151 -3.700 -0.342 3.799 H45 P0O 82 P0O H46 H46 H 0 1 N N N -20.016 19.904 -21.960 -4.052 0.991 2.673 H46 P0O 83 P0O H47 H47 H 0 1 N N N -17.010 17.694 -27.862 3.388 -0.527 -1.005 H47 P0O 84 P0O H48 H48 H 0 1 N N N -18.303 16.570 -21.911 -3.566 -1.554 -0.526 H48 P0O 85 P0O H49 H49 H 0 1 N N N -17.965 15.296 -20.231 -5.845 -1.813 -0.958 H49 P0O 86 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal P0O C14 C13 SING N N 1 P0O O1 C13 DOUB N N 2 P0O C13 C12 SING N N 3 P0O C12 C11 DOUB N E 4 P0O C11 C10 SING N N 5 P0O C23 C21 SING N N 6 P0O C10 N2 SING N N 7 P0O C10 C15 SING N N 8 P0O C20 C21 SING N N 9 P0O C20 C7 SING N N 10 P0O C20 C8 SING N N 11 P0O N2 C9 SING N N 12 P0O C21 C7 SING N N 13 P0O C21 C22 SING N N 14 P0O C15 C16 SING N N 15 P0O C9 O3 DOUB N N 16 P0O C9 C8 SING N N 17 P0O C7 C6 SING N N 18 P0O C8 N1 SING N N 19 P0O C16 C17 SING N N 20 P0O C16 C19 SING N N 21 P0O C17 C18 SING N N 22 P0O C6 N1 SING N N 23 P0O N1 C5 SING N N 24 P0O C19 O2 DOUB N N 25 P0O C19 N3 SING N N 26 P0O O4 C5 DOUB N N 27 P0O C5 C4 SING N N 28 P0O C18 N3 SING N N 29 P0O C1 C2 SING N N 30 P0O C4 C2 SING N N 31 P0O C4 N4 SING N N 32 P0O C2 C3 SING N N 33 P0O C2 C29 SING N N 34 P0O N4 C24 SING N N 35 P0O O5 C24 DOUB N N 36 P0O C24 N5 SING N N 37 P0O C27 C25 SING N N 38 P0O N5 C25 SING N N 39 P0O C25 C26 SING N N 40 P0O C25 C28 SING N N 41 P0O N3 H1 SING N N 42 P0O C4 H2 SING N N 43 P0O C6 H3 SING N N 44 P0O C6 H4 SING N N 45 P0O C7 H5 SING N N 46 P0O C8 H6 SING N N 47 P0O C10 H7 SING N N 48 P0O C15 H8 SING N N 49 P0O C15 H9 SING N N 50 P0O C17 H10 SING N N 51 P0O C17 H11 SING N N 52 P0O C20 H12 SING N N 53 P0O C22 H13 SING N N 54 P0O C22 H14 SING N N 55 P0O C22 H15 SING N N 56 P0O C26 H16 SING N N 57 P0O C26 H17 SING N N 58 P0O C26 H18 SING N N 59 P0O C28 H19 SING N N 60 P0O C28 H20 SING N N 61 P0O C28 H21 SING N N 62 P0O C1 H22 SING N N 63 P0O C1 H23 SING N N 64 P0O C1 H24 SING N N 65 P0O C11 H25 SING N N 66 P0O C12 H27 SING N N 67 P0O C14 H29 SING N N 68 P0O C14 H30 SING N N 69 P0O C14 H31 SING N N 70 P0O C16 H32 SING N N 71 P0O C18 H33 SING N N 72 P0O C18 H34 SING N N 73 P0O C23 H35 SING N N 74 P0O C23 H36 SING N N 75 P0O C23 H37 SING N N 76 P0O C27 H38 SING N N 77 P0O C27 H39 SING N N 78 P0O C27 H40 SING N N 79 P0O C29 H41 SING N N 80 P0O C29 H42 SING N N 81 P0O C29 H43 SING N N 82 P0O C3 H44 SING N N 83 P0O C3 H45 SING N N 84 P0O C3 H46 SING N N 85 P0O N2 H47 SING N N 86 P0O N4 H48 SING N N 87 P0O N5 H49 SING N N 88 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor P0O InChI InChI 1.06 "InChI=1S/C29H47N5O5/c1-16(35)10-11-18(14-17-12-13-30-23(17)36)31-24(37)21-20-19(29(20,8)9)15-34(21)25(38)22(27(2,3)4)32-26(39)33-28(5,6)7/h10-11,17-22H,12-15H2,1-9H3,(H,30,36)(H,31,37)(H2,32,33,39)/b11-10+/t17-,18+,19-,20-,21-,22+/m0/s1" P0O InChIKey InChI 1.06 BKLMFWOPPAUWNX-NWKMKTNDSA-N P0O SMILES_CANONICAL CACTVS 3.385 "CC(=O)\C=C\[C@H](C[C@@H]1CCNC1=O)NC(=O)[C@@H]2[C@@H]3[C@H](CN2C(=O)[C@@H](NC(=O)NC(C)(C)C)C(C)(C)C)C3(C)C" P0O SMILES CACTVS 3.385 "CC(=O)C=C[CH](C[CH]1CCNC1=O)NC(=O)[CH]2[CH]3[CH](CN2C(=O)[CH](NC(=O)NC(C)(C)C)C(C)(C)C)C3(C)C" P0O SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)C=C[C@H](C[C@@H]1CCNC1=O)NC(=O)[C@@H]2[C@@H]3[C@@H](C3(C)C)CN2C(=O)[C@H](C(C)(C)C)NC(=O)NC(C)(C)C" P0O SMILES "OpenEye OEToolkits" 2.0.7 "CC(=O)C=CC(CC1CCNC1=O)NC(=O)C2C3C(C3(C)C)CN2C(=O)C(C(C)(C)C)NC(=O)NC(C)(C)C" # _pdbx_chem_comp_identifier.comp_id P0O _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(1~{R},2~{S},5~{S})-3-[(2~{S})-2-(~{tert}-butylcarbamoylamino)-3,3-dimethyl-butanoyl]-6,6-dimethyl-~{N}-[(2~{S})-5-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]hex-3-en-2-yl]-3-azabicyclo[3.1.0]hexane-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site P0O "Create component" 2023-02-28 PDBJ P0O "Initial release" 2023-10-18 RCSB #