data_P6Z # _chem_comp.id P6Z _chem_comp.name 3-imidazol-1-ylbenzaldehyde _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H8 N2 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-04-16 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 172.183 _chem_comp.one_letter_code ? _chem_comp.three_letter_code P6Z _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6YP8 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal P6Z C01 C1 C 0 1 N N N N N N -19.557 -21.494 4.249 -3.265 0.961 -0.003 C01 P6Z 1 P6Z C02 C2 C 0 1 Y N N N N N -18.523 -21.360 3.133 -2.151 -0.000 -0.002 C02 P6Z 2 P6Z C03 C3 C 0 1 Y N N N N N -18.599 -20.298 2.245 -0.830 0.456 -0.000 C03 P6Z 3 P6Z C04 C4 C 0 1 Y N N N N N -17.664 -20.170 1.228 0.213 -0.456 0.001 C04 P6Z 4 P6Z C06 C5 C 0 1 Y N N N N N -18.690 -18.851 -0.584 2.668 -0.783 0.004 C06 P6Z 5 P6Z C07 C6 C 0 1 Y N N N N N -18.402 -17.697 -1.250 3.722 0.055 -0.001 C07 P6Z 6 P6Z C09 C7 C 0 1 Y N N N N N -16.862 -18.049 0.214 1.952 1.292 0.003 C09 P6Z 7 P6Z C10 C8 C 0 1 Y N N N N N -16.652 -21.110 1.099 -0.056 -1.819 -0.001 C10 P6Z 8 P6Z C11 C9 C 0 1 Y N N N N N -16.579 -22.173 1.986 -1.362 -2.273 -0.002 C11 P6Z 9 P6Z C12 C10 C 0 1 Y N N N N N -17.512 -22.299 3.003 -2.409 -1.375 0.003 C12 P6Z 10 P6Z N05 N1 N 0 1 Y N N N N N -17.746 -19.050 0.303 1.540 -0.003 0.002 N05 P6Z 11 P6Z N08 N2 N 0 1 Y N N N N N -17.279 -17.213 -0.753 3.257 1.313 -0.005 N08 P6Z 12 P6Z H1 H1 H 0 1 N N N N N N -20.569 -21.432 3.878 -4.285 0.606 -0.005 H1 P6Z 13 P6Z H4 H4 H 0 1 N N N N N N -19.389 -19.568 2.345 -0.623 1.516 -0.000 H4 P6Z 14 P6Z H5 H5 H 0 1 N N N N N N -19.545 -19.488 -0.757 2.703 -1.862 0.004 H5 P6Z 15 P6Z H6 H6 H 0 1 N N N N N N -18.988 -17.257 -2.043 4.762 -0.236 -0.002 H6 P6Z 16 P6Z H7 H7 H 0 1 N N N N N N -15.971 -17.933 0.813 1.307 2.158 0.002 H7 P6Z 17 P6Z H8 H8 H 0 1 N N N N N N -15.922 -21.014 0.309 0.759 -2.527 -0.001 H8 P6Z 18 P6Z H9 H9 H 0 1 N N N N N N -15.792 -22.906 1.884 -1.564 -3.334 -0.003 H9 P6Z 19 P6Z H10 H10 H 0 1 N N N N N N -17.451 -23.128 3.693 -3.428 -1.733 0.002 H10 P6Z 20 P6Z O1 O1 O 0 1 N N N N N N -19.511 -21.682 5.666 -3.038 2.153 0.002 O1 P6Z 21 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal P6Z C07 N08 SING Y N 1 P6Z C07 C06 DOUB Y N 2 P6Z N08 C09 DOUB Y N 3 P6Z C06 N05 SING Y N 4 P6Z C09 N05 SING Y N 5 P6Z N05 C04 SING N N 6 P6Z C10 C04 DOUB Y N 7 P6Z C10 C11 SING Y N 8 P6Z C04 C03 SING Y N 9 P6Z C11 C12 DOUB Y N 10 P6Z C03 C02 DOUB Y N 11 P6Z C12 C02 SING Y N 12 P6Z C02 C01 SING N N 13 P6Z C01 H1 SING N N 14 P6Z C03 H4 SING N N 15 P6Z C06 H5 SING N N 16 P6Z C07 H6 SING N N 17 P6Z C09 H7 SING N N 18 P6Z C10 H8 SING N N 19 P6Z C11 H9 SING N N 20 P6Z C12 H10 SING N N 21 P6Z C01 O1 DOUB N N 22 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor P6Z InChI InChI 1.03 "InChI=1S/C10H8N2O/c13-7-9-2-1-3-10(6-9)12-5-4-11-8-12/h1-8H" P6Z InChIKey InChI 1.03 CGTQCZGDVDTRDI-UHFFFAOYSA-N P6Z SMILES_CANONICAL CACTVS 3.385 "O=Cc1cccc(c1)n2ccnc2" P6Z SMILES CACTVS 3.385 "O=Cc1cccc(c1)n2ccnc2" P6Z SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)n2ccnc2)C=O" P6Z SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)n2ccnc2)C=O" # _pdbx_chem_comp_identifier.comp_id P6Z _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier 3-imidazol-1-ylbenzaldehyde # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site P6Z "Create component" 2020-04-16 PDBE P6Z "Initial release" 2020-09-23 RCSB P6Z "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id P6Z _pdbx_chem_comp_pcm.modified_residue_id LYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C01 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom NZ _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #