data_PET # _chem_comp.id PET _chem_comp.name "1,5-DI(4-AMIDINOPHENOXY)-3-OXA-PENTANE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAD _chem_comp.formula "C18 H22 N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 342.392 _chem_comp.one_letter_code ? _chem_comp.three_letter_code PET _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 166D _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal PET C1 C1 C 0 1 Y N N 9.877 24.853 5.862 -0.489 0.544 3.712 C1 PET 1 PET C2 C2 C 0 1 Y N N 10.943 24.016 5.430 0.417 1.497 4.159 C2 PET 2 PET C3 C3 C 0 1 Y N N 11.810 24.433 4.380 1.160 1.264 5.295 C3 PET 3 PET C4 C4 C 0 1 Y N N 11.627 25.677 3.735 1.002 0.068 5.998 C4 PET 4 PET C5 C5 C 0 1 Y N N 10.577 26.500 4.173 0.094 -0.889 5.543 C5 PET 5 PET C6 C6 C 0 1 Y N N 9.712 26.091 5.223 -0.649 -0.647 4.408 C6 PET 6 PET C7 C7 C 0 1 N N N 12.397 26.051 2.628 1.799 -0.185 7.218 C7 PET 7 PET CA CA C 0 1 N N N 9.329 23.401 7.629 -2.048 -0.370 2.393 CA PET 8 PET CB CB C 0 1 N N N 8.482 23.298 8.873 -2.902 -0.171 1.139 CB PET 9 PET "C1'" "C1'" C 0 1 Y N N 8.951 19.600 13.598 -0.498 -0.546 -3.703 "C1'" PET 10 PET "C2'" "C2'" C 0 1 Y N N 10.329 19.417 13.796 0.402 -1.505 -4.151 "C2'" PET 11 PET "C3'" "C3'" C 0 1 Y N N 10.800 18.667 14.902 1.145 -1.276 -5.289 "C3'" PET 12 PET "C4'" "C4'" C 0 1 Y N N 9.900 18.083 15.800 0.992 -0.080 -5.991 "C4'" PET 13 PET "C5'" "C5'" C 0 1 Y N N 8.514 18.259 15.603 0.086 0.880 -5.538 "C5'" PET 14 PET "C6'" "C6'" C 0 1 Y N N 8.051 19.015 14.505 -0.656 0.643 -4.403 "C6'" PET 15 PET "C7'" "C7'" C 0 1 N N N 10.341 17.304 16.861 1.788 0.169 -7.213 "C7'" PET 16 PET "CA'" "CA'" C 0 1 N N N 9.196 20.855 11.590 -2.050 0.377 -2.382 "CA'" PET 17 PET "CB'" "CB'" C 0 1 N N N 8.289 21.736 10.729 -2.903 0.183 -1.127 "CB'" PET 18 PET N1 N1 N 0 1 N N N 12.267 27.267 2.127 2.650 0.707 7.638 N1 PET 19 PET N2 N2 N 0 1 N N N 13.158 25.164 2.002 1.641 -1.366 7.910 N2 PET 20 PET "N1'" "N1'" N 0 1 N N N 9.604 17.133 17.958 2.633 -0.728 -7.634 "N1'" PET 21 PET "N2'" "N2'" N 0 1 N N N 11.532 16.683 16.799 1.636 1.351 -7.905 "N2'" PET 22 PET O1 O1 O 0 1 N N N 8.970 24.538 6.860 -1.220 0.777 2.592 O1 PET 23 PET "O1'" "O1'" O 0 1 N N N 8.362 20.315 12.586 -1.228 -0.775 -2.582 "O1'" PET 24 PET O2 O2 O 0 1 N N N 9.013 22.203 9.599 -2.051 0.003 0.005 O2 PET 25 PET H2 H2 H 0 1 N N N 11.098 23.036 5.912 0.539 2.422 3.615 H2 PET 26 PET H3 H3 H 0 1 N N N 12.639 23.779 4.060 1.864 2.005 5.642 H3 PET 27 PET H5 H5 H 0 1 N N N 10.430 27.479 3.686 -0.030 -1.815 6.084 H5 PET 28 PET H6 H6 H 0 1 N N N 8.891 26.751 5.550 -1.354 -1.386 4.058 H6 PET 29 PET HA1 1HA H 0 1 N N N 10.417 23.396 7.871 -1.422 -1.253 2.269 HA1 PET 30 PET HA2 2HA H 0 1 N N N 9.285 22.465 7.023 -2.698 -0.503 3.258 HA2 PET 31 PET HB1 1HB H 0 1 N N N 8.430 24.244 9.460 -3.534 -1.046 0.988 HB1 PET 32 PET HB2 2HB H 0 1 N N N 7.389 23.212 8.666 -3.529 0.711 1.263 HB2 PET 33 PET "H2'" "H2'" H 0 1 N N N 11.042 19.862 13.082 0.519 -2.430 -3.607 "H2'" PET 34 PET "H3'" "H3'" H 0 1 N N N 11.882 18.535 15.066 1.845 -2.021 -5.636 "H3'" PET 35 PET "H5'" "H5'" H 0 1 N N N 7.794 17.806 16.305 -0.033 1.807 -6.079 "H5'" PET 36 PET "H6'" "H6'" H 0 1 N N N 6.967 19.151 14.353 -1.357 1.386 -4.052 "H6'" PET 37 PET "HA'1" "1HA'" H 0 0 N N N 9.755 20.085 11.008 -2.700 0.514 -3.246 "HA'1" PET 38 PET "HA'2" "2HA'" H 0 0 N N N 10.087 21.389 11.993 -1.418 1.256 -2.259 "HA'2" PET 39 PET "HB'1" "1HB'" H 0 0 N N N 7.347 21.214 10.439 -3.535 -0.696 -1.249 "HB'1" PET 40 PET "HB'2" "2HB'" H 0 0 N N N 7.835 22.570 11.312 -3.530 1.062 -0.974 "HB'2" PET 41 PET HN1 HN1 H 0 1 N N N 13.029 27.823 2.513 2.761 1.538 7.151 HN1 PET 42 PET HN21 1HN2 H 0 0 N N N 13.719 25.436 1.195 2.163 -1.533 8.710 HN21 PET 43 PET HN22 2HN2 H 0 0 N N N 12.570 24.376 1.729 1.004 -2.029 7.600 HN22 PET 44 PET "HN1'" "'HN1" H 0 0 N N N 9.208 17.556 17.118 3.156 -0.564 -8.435 "HN1'" PET 45 PET "HN'1" "1HN'" H 0 0 N N N 11.856 16.110 17.578 2.158 1.514 -8.706 "HN'1" PET 46 PET "HN'2" "2HN'" H 0 0 N N N 12.247 17.381 16.594 1.007 2.019 -7.591 "HN'2" PET 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PET C1 C2 DOUB Y N 1 PET C1 C6 SING Y N 2 PET C1 O1 SING N N 3 PET C2 C3 SING Y N 4 PET C2 H2 SING N N 5 PET C3 C4 DOUB Y N 6 PET C3 H3 SING N N 7 PET C4 C5 SING Y N 8 PET C4 C7 SING N N 9 PET C5 C6 DOUB Y N 10 PET C5 H5 SING N N 11 PET C6 H6 SING N N 12 PET C7 N1 DOUB N N 13 PET C7 N2 SING N N 14 PET CA CB SING N N 15 PET CA O1 SING N N 16 PET CA HA1 SING N N 17 PET CA HA2 SING N N 18 PET CB O2 SING N N 19 PET CB HB1 SING N N 20 PET CB HB2 SING N N 21 PET "C1'" "C2'" DOUB Y N 22 PET "C1'" "C6'" SING Y N 23 PET "C1'" "O1'" SING N N 24 PET "C2'" "C3'" SING Y N 25 PET "C2'" "H2'" SING N N 26 PET "C3'" "C4'" DOUB Y N 27 PET "C3'" "H3'" SING N N 28 PET "C4'" "C5'" SING Y N 29 PET "C4'" "C7'" SING N N 30 PET "C5'" "C6'" DOUB Y N 31 PET "C5'" "H5'" SING N N 32 PET "C6'" "H6'" SING N N 33 PET "C7'" "N1'" DOUB N E 34 PET "C7'" "N2'" SING N N 35 PET "CA'" "CB'" SING N N 36 PET "CA'" "O1'" SING N N 37 PET "CA'" "HA'1" SING N N 38 PET "CA'" "HA'2" SING N N 39 PET "CB'" O2 SING N N 40 PET "CB'" "HB'1" SING N N 41 PET "CB'" "HB'2" SING N N 42 PET N1 HN1 SING N N 43 PET N2 HN21 SING N N 44 PET N2 HN22 SING N N 45 PET "N1'" "HN1'" SING N N 46 PET "N2'" "HN'1" SING N N 47 PET "N2'" "HN'2" SING N N 48 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PET SMILES ACDLabs 10.04 "O(c1ccc(cc1)C(=[N@H])N)CCOCCOc2ccc(C(=[N@H])N)cc2" PET SMILES_CANONICAL CACTVS 3.341 "NC(=N)c1ccc(OCCOCCOc2ccc(cc2)C(N)=N)cc1" PET SMILES CACTVS 3.341 "NC(=N)c1ccc(OCCOCCOc2ccc(cc2)C(N)=N)cc1" PET SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "[H]/N=C(\c1ccc(cc1)OCCOCCOc2ccc(cc2)C(=N)N)/N" PET SMILES "OpenEye OEToolkits" 1.5.0 "[H]N=C(c1ccc(cc1)OCCOCCOc2ccc(cc2)C(=N)N)N" PET InChI InChI 1.03 "InChI=1S/C18H22N4O3/c19-17(20)13-1-5-15(6-2-13)24-11-9-23-10-12-25-16-7-3-14(4-8-16)18(21)22/h1-8H,9-12H2,(H3,19,20)(H3,21,22)" PET InChIKey InChI 1.03 RUGJWTYDBUIXNX-UHFFFAOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PET "SYSTEMATIC NAME" ACDLabs 10.04 "4,4'-[oxybis(ethane-2,1-diyloxy)]dibenzenecarboximidamide" PET "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "4-[2-[2-(4-carbamimidoylphenoxy)ethoxy]ethoxy]benzenecarboximidamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site PET "Create component" 1999-07-08 RCSB PET "Modify descriptor" 2011-06-04 RCSB #