data_PNQ # _chem_comp.id PNQ _chem_comp.name "P-NITROPHENYL AMINOETHYLDIPHOSPHATE BERYLLIUM TRIFLUORIDE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H11 Be F3 N2 O9 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-09-22 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 407.136 _chem_comp.one_letter_code ? _chem_comp.three_letter_code PNQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag Y _chem_comp.pdbx_model_coordinates_db_code 1D0Z _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal PNQ BE BE BE 0 0 N N N 32.728 58.281 23.026 ? ? ? BE PNQ 1 PNQ F1 F1 F 0 1 N N N 31.479 57.470 23.358 ? ? ? F1 PNQ 2 PNQ F2 F2 F 0 1 N N N 33.304 58.901 24.295 ? ? ? F2 PNQ 3 PNQ F3 F3 F 0 1 N N N 32.428 59.285 21.903 ? ? ? F3 PNQ 4 PNQ PB PB P 0 1 N N R 34.216 56.722 20.997 ? ? ? PB PNQ 5 PNQ OB1 OB1 O 0 1 N N N 33.682 55.365 20.842 ? ? ? OB1 PNQ 6 PNQ OB2 OB2 O 0 1 N N N 33.715 57.664 19.957 ? ? ? OB2 PNQ 7 PNQ OB3 OB3 O 0 1 N N N 33.961 57.339 22.464 ? ? ? OB3 PNQ 8 PNQ OA3 OA3 O 0 1 N N N 35.807 56.602 20.895 ? ? ? OA3 PNQ 9 PNQ PA PA P 0 1 N N R 36.833 57.418 19.972 ? ? ? PA PNQ 10 PNQ OA1 OA1 O 0 1 N N N 36.478 57.228 18.499 ? ? ? OA1 PNQ 11 PNQ OA2 OA2 O 0 1 N N N 36.807 58.828 20.347 ? ? ? OA2 PNQ 12 PNQ OE2 OE2 O 0 1 N N N 38.298 56.788 20.162 ? ? ? OE2 PNQ 13 PNQ NA3 NA3 N 0 1 N N N 40.754 56.275 20.790 ? ? ? NA3 PNQ 14 PNQ CA2 CA2 C 0 1 N N N 40.052 56.963 21.696 ? ? ? CA2 PNQ 15 PNQ CA1 CA1 C 0 1 N N N 38.581 56.578 21.528 ? ? ? CA1 PNQ 16 PNQ C1 C1 C 0 1 Y N N 42.204 56.210 20.892 ? ? ? C1 PNQ 17 PNQ C6 C6 C 0 1 Y N N 42.880 57.009 21.850 ? ? ? C6 PNQ 18 PNQ C5 C5 C 0 1 Y N N 44.277 57.035 21.884 ? ? ? C5 PNQ 19 PNQ C4 C4 C 0 1 Y N N 44.971 56.244 20.947 ? ? ? C4 PNQ 20 PNQ C3 C3 C 0 1 Y N N 44.287 55.476 20.004 ? ? ? C3 PNQ 21 PNQ C2 C2 C 0 1 Y N N 42.909 55.489 19.924 ? ? ? C2 PNQ 22 PNQ N4 N4 N 1 1 N N N 46.463 56.277 20.865 ? ? ? N4 PNQ 23 PNQ O4A O4A O 0 1 N N N 47.070 55.581 20.079 ? ? ? O4A PNQ 24 PNQ O4B O4B O -1 1 N N N 47.100 56.896 21.645 ? ? ? O4B PNQ 25 PNQ HOB2 2HOB H 0 0 N N N 33.608 58.528 20.337 ? ? ? HOB2 PNQ 26 PNQ HOA2 2HOA H 0 0 N N N 35.534 57.189 18.403 ? ? ? HOA2 PNQ 27 PNQ HNA1 1HNA H 0 0 N N N 40.429 55.331 20.845 ? ? ? HNA1 PNQ 28 PNQ HA21 1HA2 H 0 0 N N N 40.395 56.713 22.711 ? ? ? HA21 PNQ 29 PNQ HA22 2HA2 H 0 0 N N N 40.187 58.045 21.549 ? ? ? HA22 PNQ 30 PNQ HA11 1HA1 H 0 0 N N N 37.936 57.203 22.163 ? ? ? HA11 PNQ 31 PNQ HA12 2HA1 H 0 0 N N N 38.393 55.537 21.830 ? ? ? HA12 PNQ 32 PNQ H6 H6 H 0 1 N N N 42.313 57.599 22.555 ? ? ? H6 PNQ 33 PNQ H5 H5 H 0 1 N N N 44.807 57.641 22.604 ? ? ? H5 PNQ 34 PNQ H3 H3 H 0 1 N N N 44.849 54.857 19.321 ? ? ? H3 PNQ 35 PNQ H2 H2 H 0 1 N N N 42.392 54.959 19.138 ? ? ? H2 PNQ 36 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PNQ BE F1 SING N N 1 PNQ BE F2 SING N N 2 PNQ BE F3 SING N N 3 PNQ BE OB3 SING N N 4 PNQ PB OB1 DOUB N N 5 PNQ PB OB2 SING N N 6 PNQ PB OB3 SING N N 7 PNQ PB OA3 SING N N 8 PNQ OB2 HOB2 SING N N 9 PNQ OA3 PA SING N N 10 PNQ PA OA1 SING N N 11 PNQ PA OA2 DOUB N N 12 PNQ PA OE2 SING N N 13 PNQ OA1 HOA2 SING N N 14 PNQ OE2 CA1 SING N N 15 PNQ NA3 CA2 SING N N 16 PNQ NA3 C1 SING N N 17 PNQ NA3 HNA1 SING N N 18 PNQ CA2 CA1 SING N N 19 PNQ CA2 HA21 SING N N 20 PNQ CA2 HA22 SING N N 21 PNQ CA1 HA11 SING N N 22 PNQ CA1 HA12 SING N N 23 PNQ C1 C6 DOUB Y N 24 PNQ C1 C2 SING Y N 25 PNQ C6 C5 SING Y N 26 PNQ C6 H6 SING N N 27 PNQ C5 C4 DOUB Y N 28 PNQ C5 H5 SING N N 29 PNQ C4 C3 SING Y N 30 PNQ C4 N4 SING N N 31 PNQ C3 C2 DOUB Y N 32 PNQ C3 H3 SING N N 33 PNQ C2 H2 SING N N 34 PNQ N4 O4A DOUB N N 35 PNQ N4 O4B SING N N 36 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PNQ SMILES_CANONICAL CACTVS 3.341 "O[P@](=O)(OCCNc1ccc(cc1)[N+]([O-])=O)O[P@@](O)(=O)O[Be](F)(F)F" PNQ SMILES CACTVS 3.341 "O[P](=O)(OCCNc1ccc(cc1)[N+]([O-])=O)O[P](O)(=O)O[Be](F)(F)F" PNQ SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "[Be](O[P@@](=O)(O)O[P@](=O)(O)OCCNc1ccc(cc1)[N+](=O)[O-])(F)(F)F" PNQ SMILES "OpenEye OEToolkits" 1.5.0 "[Be](OP(=O)(O)OP(=O)(O)OCCNc1ccc(cc1)[N+](=O)[O-])(F)(F)F" PNQ InChI InChI 1.03 "InChI=1S/C8H12N2O9P2.Be.3FH/c11-10(12)8-3-1-7(2-4-8)9-5-6-18-21(16,17)19-20(13,14)15;;;;/h1-4,9H,5-6H2,(H,16,17)(H2,13,14,15);;3*1H/q;+4;;;/p-4" PNQ InChIKey InChI 1.03 VQFXKFKMXDVHLH-UHFFFAOYSA-J # _pdbx_chem_comp_identifier.comp_id PNQ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 1.5.0 _pdbx_chem_comp_identifier.identifier "trifluoro-[hydroxy-[hydroxy-[2-[(4-nitrophenyl)amino]ethoxy]phosphoryl]oxy-phosphoryl]oxy-beryllium" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site PNQ "Create component" 1999-09-22 EBI PNQ "Modify descriptor" 2011-06-04 RCSB ##