data_PP5 # _chem_comp.id PP5 _chem_comp.name "METHYL (2S)-[1-((N-(NAPHTHALENEACETYL))-L-VALYL)AMINOMETHYL)HYDROXYPHOSPHINYLOXY]-3-PHENYL PROPANOATE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H32 N2 O7 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge -1 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 539.537 _chem_comp.one_letter_code ? _chem_comp.three_letter_code PP5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2WEC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal PP5 OI OI O 0 1 N N N 17.310 4.038 19.545 -4.054 -1.083 0.493 OI PP5 1 PP5 C1 C1 C 0 1 Y N N 14.491 4.281 19.143 -5.832 0.389 -0.792 C1 PP5 2 PP5 C2 C2 C 0 1 Y N N 13.666 3.182 18.968 -6.973 -0.346 -0.892 C2 PP5 3 PP5 C3 C3 C 0 1 Y N N 12.662 2.858 19.912 -8.126 0.022 -0.202 C3 PP5 4 PP5 C4 C4 C 0 1 Y N N 12.447 3.617 21.062 -8.145 1.126 0.593 C4 PP5 5 PP5 C5 C5 C 0 1 Y N N 13.287 4.783 21.283 -6.986 1.910 0.722 C5 PP5 6 PP5 C6 C6 C 0 1 Y N N 14.299 5.110 20.331 -5.811 1.533 0.024 C6 PP5 7 PP5 C7 C7 C 0 1 Y N N 15.110 6.254 20.570 -4.654 2.321 0.148 C7 PP5 8 PP5 C8 C8 C 0 1 Y N N 14.947 7.055 21.694 -4.673 3.425 0.943 C8 PP5 9 PP5 C9 C9 C 0 1 Y N N 13.945 6.740 22.632 -5.826 3.792 1.634 C9 PP5 10 PP5 C10 C10 C 0 1 Y N N 13.142 5.632 22.420 -6.967 3.058 1.533 C10 PP5 11 PP5 C11 C11 C 0 1 N N N 15.551 4.563 18.078 -4.595 -0.025 -1.546 C11 PP5 12 PP5 C12 C12 C 0 1 N N N 16.945 4.781 18.633 -3.712 -0.853 -0.648 C12 PP5 13 PP5 C14 C14 C 0 1 N N N 20.192 8.823 21.070 2.141 -2.194 -0.303 C14 PP5 14 PP5 NV NV N 0 1 N N N 18.010 5.559 18.458 -2.543 -1.336 -1.112 NV PP5 15 PP5 CAV CAV C 0 1 N N S 19.346 5.810 19.005 -1.685 -2.141 -0.239 CAV PP5 16 PP5 CV CV C 0 1 N N N 19.260 7.247 19.572 -0.256 -2.044 -0.710 CV PP5 17 PP5 OV OV O 0 1 N N N 18.394 8.088 19.209 -0.017 -1.838 -1.881 OV PP5 18 PP5 CBV CBV C 0 1 N N N 20.493 5.958 17.997 -2.138 -3.601 -0.283 CBV PP5 19 PP5 CV1 CV1 C 0 1 N N N 20.444 4.583 17.332 -1.273 -4.433 0.666 CV1 PP5 20 PP5 CV2 CV2 C 0 1 N N N 20.219 6.897 16.824 -3.603 -3.694 0.150 CV2 PP5 21 PP5 NL NL N 0 1 N N N 20.208 7.474 20.485 0.755 -2.186 0.170 NL PP5 22 PP5 P P P 0 1 N N N 21.666 9.136 22.097 2.839 -0.516 -0.169 P PP5 23 PP5 O O O 0 1 N N N 22.581 10.071 21.455 2.917 -0.107 1.319 O PP5 24 PP5 OH OH O -1 1 N N N 22.252 7.894 22.571 1.935 0.480 -0.930 OH PP5 25 PP5 CA CA C 0 1 N N S 20.755 11.111 23.431 4.760 0.862 -0.782 CA PP5 26 PP5 CB CB C 0 1 N N N 19.388 11.395 24.066 6.035 0.965 0.057 CB PP5 27 PP5 CG CG C 0 1 Y N N 19.292 11.005 25.513 5.723 0.619 1.490 CG PP5 28 PP5 CD1 CD1 C 0 1 Y N N 20.032 11.679 26.490 5.821 -0.690 1.922 CD1 PP5 29 PP5 CD2 CD2 C 0 1 Y N N 18.453 9.969 25.906 5.344 1.612 2.374 CD2 PP5 30 PP5 CE1 CE1 C 0 1 Y N N 19.943 11.316 27.827 5.535 -1.008 3.236 CE1 PP5 31 PP5 CE2 CE2 C 0 1 Y N N 18.354 9.604 27.248 5.054 1.294 3.687 CE2 PP5 32 PP5 CZ CZ C 0 1 Y N N 19.100 10.277 28.208 5.151 -0.016 4.119 CZ PP5 33 PP5 C C C 0 1 N N N 21.867 11.846 24.164 5.044 1.326 -2.188 C PP5 34 PP5 CS CS C 0 1 N N N 22.570 14.130 24.397 5.653 3.052 -3.772 CS PP5 35 PP5 OP OP O 0 1 N N N 21.020 9.718 23.398 4.316 -0.496 -0.809 OP PP5 36 PP5 OS OS O 0 1 N N N 21.539 13.165 24.074 5.379 2.605 -2.417 OS PP5 37 PP5 OE OE O 0 1 N N N 22.946 11.390 24.487 4.971 0.546 -3.108 OE PP5 38 PP5 H2 H2 H 0 1 N N N 13.809 2.559 18.069 -6.985 -1.227 -1.517 H2 PP5 39 PP5 H3 H3 H 0 1 N N N 12.020 1.976 19.744 -9.019 -0.579 -0.300 H3 PP5 40 PP5 H4 H4 H 0 1 N N N 11.651 3.310 21.762 -9.046 1.399 1.121 H4 PP5 41 PP5 H7 H7 H 0 1 N N N 15.900 6.532 19.852 -3.753 2.048 -0.382 H7 PP5 42 PP5 H8 H8 H 0 1 N N N 15.604 7.928 21.839 -3.781 4.026 1.040 H8 PP5 43 PP5 H9 H9 H 0 1 N N N 13.789 7.359 23.531 -5.815 4.674 2.257 H9 PP5 44 PP5 H10 H10 H 0 1 N N N 12.367 5.420 23.176 -7.854 3.355 2.073 H10 PP5 45 PP5 H111 1H11 H 0 0 N N N 15.558 3.754 17.310 -4.052 0.863 -1.871 H111 PP5 46 PP5 H112 2H11 H 0 0 N N N 15.244 5.425 17.441 -4.881 -0.614 -2.417 H112 PP5 47 PP5 H141 1H14 H 0 0 N N N 20.072 9.604 20.283 2.168 -2.517 -1.344 H141 PP5 48 PP5 H142 2H14 H 0 0 N N N 19.252 9.005 21.642 2.729 -2.882 0.306 H142 PP5 49 PP5 HNV HNV H 0 1 N N N 17.714 6.134 17.669 -2.269 -1.152 -2.024 HNV PP5 50 PP5 HAV HAV H 0 1 N N N 19.567 4.947 19.675 -1.756 -1.769 0.784 HAV PP5 51 PP5 HBV HBV H 0 1 N N N 21.408 6.322 18.518 -2.034 -3.984 -1.298 HBV PP5 52 PP5 HV11 1HV1 H 0 0 N N N 21.277 4.690 16.599 -1.291 -3.986 1.660 HV11 PP5 53 PP5 HV12 2HV1 H 0 0 N N N 20.512 3.708 18.020 -1.663 -5.449 0.718 HV12 PP5 54 PP5 HV13 3HV1 H 0 0 N N N 19.458 4.285 16.905 -0.248 -4.456 0.297 HV13 PP5 55 PP5 HV21 1HV2 H 0 0 N N N 21.052 7.004 16.091 -4.219 -3.101 -0.527 HV21 PP5 56 PP5 HV22 2HV2 H 0 0 N N N 19.285 6.588 16.297 -3.926 -4.734 0.118 HV22 PP5 57 PP5 HV23 3HV2 H 0 0 N N N 19.910 7.899 17.201 -3.707 -3.312 1.165 HV23 PP5 58 PP5 HNL HNL H 0 1 N N N 20.857 6.718 20.705 0.564 -2.283 1.116 HNL PP5 59 PP5 HA HA H 0 1 N N N 20.723 11.488 22.382 3.984 1.489 -0.343 HA PP5 60 PP5 HB1 1HB H 0 1 N N N 19.108 12.465 23.930 6.782 0.272 -0.330 HB1 PP5 61 PP5 HB2 2HB H 0 1 N N N 18.574 10.911 23.476 6.423 1.983 0.005 HB2 PP5 62 PP5 HD1 HD1 H 0 1 N N N 20.696 12.510 26.201 6.121 -1.465 1.232 HD1 PP5 63 PP5 HD2 HD2 H 0 1 N N N 17.860 9.431 25.146 5.268 2.635 2.037 HD2 PP5 64 PP5 HE1 HE1 H 0 1 N N N 20.540 11.851 28.584 5.611 -2.031 3.574 HE1 PP5 65 PP5 HE2 HE2 H 0 1 N N N 17.684 8.781 27.550 4.753 2.069 4.377 HE2 PP5 66 PP5 HZ HZ H 0 1 N N N 19.023 9.987 29.269 4.927 -0.264 5.146 HZ PP5 67 PP5 HS1 1HS H 0 1 N N N 22.301 15.209 24.323 6.489 2.484 -4.180 HS1 PP5 68 PP5 HS2 2HS H 0 1 N N N 22.969 13.917 25.415 4.770 2.895 -4.391 HS2 PP5 69 PP5 HS3 3HS H 0 1 N N N 23.472 13.929 23.773 5.906 4.112 -3.760 HS3 PP5 70 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PP5 OI C12 DOUB N N 1 PP5 C1 C2 DOUB Y N 2 PP5 C1 C6 SING Y N 3 PP5 C1 C11 SING N N 4 PP5 C2 C3 SING Y N 5 PP5 C2 H2 SING N N 6 PP5 C3 C4 DOUB Y N 7 PP5 C3 H3 SING N N 8 PP5 C4 C5 SING Y N 9 PP5 C4 H4 SING N N 10 PP5 C5 C6 DOUB Y N 11 PP5 C5 C10 SING Y N 12 PP5 C6 C7 SING Y N 13 PP5 C7 C8 DOUB Y N 14 PP5 C7 H7 SING N N 15 PP5 C8 C9 SING Y N 16 PP5 C8 H8 SING N N 17 PP5 C9 C10 DOUB Y N 18 PP5 C9 H9 SING N N 19 PP5 C10 H10 SING N N 20 PP5 C11 C12 SING N N 21 PP5 C11 H111 SING N N 22 PP5 C11 H112 SING N N 23 PP5 C12 NV SING N N 24 PP5 C14 NL SING N N 25 PP5 C14 P SING N N 26 PP5 C14 H141 SING N N 27 PP5 C14 H142 SING N N 28 PP5 NV CAV SING N N 29 PP5 NV HNV SING N N 30 PP5 CAV CV SING N N 31 PP5 CAV CBV SING N N 32 PP5 CAV HAV SING N N 33 PP5 CV OV DOUB N N 34 PP5 CV NL SING N N 35 PP5 CBV CV1 SING N N 36 PP5 CBV CV2 SING N N 37 PP5 CBV HBV SING N N 38 PP5 CV1 HV11 SING N N 39 PP5 CV1 HV12 SING N N 40 PP5 CV1 HV13 SING N N 41 PP5 CV2 HV21 SING N N 42 PP5 CV2 HV22 SING N N 43 PP5 CV2 HV23 SING N N 44 PP5 NL HNL SING N N 45 PP5 P O DOUB N N 46 PP5 P OH SING N N 47 PP5 P OP SING N N 48 PP5 CA CB SING N N 49 PP5 CA C SING N N 50 PP5 CA OP SING N N 51 PP5 CA HA SING N N 52 PP5 CB CG SING N N 53 PP5 CB HB1 SING N N 54 PP5 CB HB2 SING N N 55 PP5 CG CD1 DOUB Y N 56 PP5 CG CD2 SING Y N 57 PP5 CD1 CE1 SING Y N 58 PP5 CD1 HD1 SING N N 59 PP5 CD2 CE2 DOUB Y N 60 PP5 CD2 HD2 SING N N 61 PP5 CE1 CZ DOUB Y N 62 PP5 CE1 HE1 SING N N 63 PP5 CE2 CZ SING Y N 64 PP5 CE2 HE2 SING N N 65 PP5 CZ HZ SING N N 66 PP5 C OS SING N N 67 PP5 C OE DOUB N N 68 PP5 CS OS SING N N 69 PP5 CS HS1 SING N N 70 PP5 CS HS2 SING N N 71 PP5 CS HS3 SING N N 72 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PP5 SMILES ACDLabs 10.04 "O=C(NC(C(=O)NCP([O-])(=O)OC(C(=O)OC)Cc1ccccc1)C(C)C)Cc3c2ccccc2ccc3" PP5 SMILES_CANONICAL CACTVS 3.341 "COC(=O)[C@H](Cc1ccccc1)O[P]([O-])(=O)CNC(=O)[C@@H](NC(=O)Cc2cccc3ccccc23)C(C)C" PP5 SMILES CACTVS 3.341 "COC(=O)[CH](Cc1ccccc1)O[P]([O-])(=O)CNC(=O)[CH](NC(=O)Cc2cccc3ccccc23)C(C)C" PP5 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(C)[C@@H](C(=O)NC[P@](=O)([O-])O[C@@H](Cc1ccccc1)C(=O)OC)NC(=O)Cc2cccc3c2cccc3" PP5 SMILES "OpenEye OEToolkits" 1.5.0 "CC(C)C(C(=O)NCP(=O)([O-])OC(Cc1ccccc1)C(=O)OC)NC(=O)Cc2cccc3c2cccc3" PP5 InChI InChI 1.03 "InChI=1S/C28H33N2O7P/c1-19(2)26(30-25(31)17-22-14-9-13-21-12-7-8-15-23(21)22)27(32)29-18-38(34,35)37-24(28(33)36-3)16-20-10-5-4-6-11-20/h4-15,19,24,26H,16-18H2,1-3H3,(H,29,32)(H,30,31)(H,34,35)/p-1/t24-,26-/m0/s1" PP5 InChIKey InChI 1.03 AYDPZCGMCQBSDG-AHWVRZQESA-M # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PP5 "SYSTEMATIC NAME" ACDLabs 10.04 "N-({[(1S)-1-benzyl-2-methoxy-2-oxoethoxy]phosphinato}methyl)-N~2~-(naphthalen-1-ylacetyl)-L-valinamide" PP5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2S)-1-methoxy-1-oxo-3-phenyl-propan-2-yl]oxy-[[[(2S)-3-methyl-2-(2-naphthalen-1-ylethanoylamino)butanoyl]amino]methyl]phosphinate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site PP5 "Create component" 1999-07-08 RCSB PP5 "Modify descriptor" 2011-06-04 RCSB #