data_PUJ # _chem_comp.id PUJ _chem_comp.name ;(1E,3S)-1-{10-[2-carboxy-5-({2-[2-(hexyloxy)ethoxy]ethyl}carbamoyl)phenyl]-7-(3-fluoroazetidin-1-yl)-5,5-dimethyldibenz o[b,e]silin-3(5H)-ylidene}-3-fluoroazetidin-1-ium ; _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C39 H48 F2 N3 O5 Si" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms JF635 _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2019-08-23 _chem_comp.pdbx_modified_date 2020-09-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 704.898 _chem_comp.one_letter_code ? _chem_comp.three_letter_code PUJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6U2M _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal PUJ C4 C1 C 0 1 Y N N 24.475 30.109 53.029 4.728 0.282 0.163 C4 PUJ 1 PUJ C14 C2 C 0 1 Y N N 22.733 27.369 54.948 1.140 0.503 -0.972 C14 PUJ 2 PUJ C5 C3 C 0 1 Y N N 24.185 31.449 52.765 5.758 1.117 0.382 C5 PUJ 3 PUJ C6 C4 C 0 1 Y N N 23.069 32.071 53.351 5.578 2.489 0.165 C6 PUJ 4 PUJ C11 C5 C 0 1 Y N N 22.511 30.053 54.468 3.299 2.104 -0.493 C11 PUJ 5 PUJ C7 C6 C 0 1 N N N 21.872 34.286 53.873 6.161 4.572 1.123 C7 PUJ 6 PUJ C8 C7 C 0 1 N N N 22.466 35.411 52.953 7.456 4.442 1.945 C8 PUJ 7 PUJ C9 C8 C 0 1 N N N 23.420 34.376 52.226 7.444 2.956 1.546 C9 PUJ 8 PUJ C10 C9 C 0 1 Y N N 22.246 31.359 54.211 4.340 2.956 -0.272 C10 PUJ 9 PUJ C12 C10 C 0 1 Y N N 23.645 29.399 53.909 3.459 0.721 -0.281 C12 PUJ 10 PUJ C13 C11 C 0 1 N N N 23.861 28.031 54.222 2.356 -0.190 -0.515 C13 PUJ 11 PUJ N1 N1 N 0 1 N N N 22.790 33.428 53.134 6.624 3.377 0.384 N1 PUJ 12 PUJ N2 N2 N 0 1 N N N 19.172 24.186 54.322 -2.698 3.318 0.020 N2 PUJ 13 PUJ C3 C12 C 0 1 N N N 27.496 30.180 52.745 5.293 -1.933 2.188 C3 PUJ 14 PUJ N3 N3 N 1 1 N N N 28.060 24.466 52.880 1.556 -5.656 -0.118 N3 PUJ 15 PUJ C1 C13 C 0 1 N N N 25.757 29.370 50.415 6.189 -2.260 -0.693 C1 PUJ 16 PUJ SI1 SI1 SI 0 0 N N N 25.915 29.294 52.277 4.850 -1.584 0.412 SI1 PUJ 17 PUJ F1 F1 F 0 1 N N N 23.082 36.403 53.637 7.277 4.659 3.316 F1 PUJ 18 PUJ C15 C14 C 0 1 Y N N 21.863 26.627 54.153 0.372 1.241 -0.069 C15 PUJ 19 PUJ C16 C15 C 0 1 Y N N 20.759 25.984 54.702 -0.773 1.898 -0.511 C16 PUJ 20 PUJ C17 C16 C 0 1 N N N 19.883 25.175 53.778 -1.589 2.681 0.445 C17 PUJ 21 PUJ O1 O1 O 0 1 N N N 19.861 25.398 52.564 -1.258 2.751 1.612 O1 PUJ 22 PUJ C18 C17 C 0 1 N N N 18.366 23.278 53.524 -3.506 4.094 0.965 C18 PUJ 23 PUJ C19 C18 C 0 1 N N N 17.951 22.083 54.337 -4.699 4.709 0.231 C19 PUJ 24 PUJ O2 O2 O 0 1 N N N 17.612 21.043 53.434 -5.559 3.668 -0.236 O2 PUJ 25 PUJ C20 C19 C 0 1 N N N 18.599 20.021 53.358 -6.711 4.138 -0.939 C20 PUJ 26 PUJ C21 C20 C 0 1 N N N 18.071 18.885 52.554 -7.556 2.945 -1.390 C21 PUJ 27 PUJ O3 O3 O 0 1 N N N 17.572 19.357 51.303 -8.066 2.262 -0.243 O3 PUJ 28 PUJ C22 C21 C 0 1 N N N 18.443 19.152 50.191 -8.872 1.124 -0.555 C22 PUJ 29 PUJ C23 C22 C 0 1 N N N 17.687 18.520 49.040 -9.361 0.475 0.742 C23 PUJ 30 PUJ C24 C23 C 0 1 N N N 16.460 19.263 48.543 -10.225 -0.743 0.407 C24 PUJ 31 PUJ C25 C24 C 0 1 N N N 15.330 18.344 48.170 -10.714 -1.393 1.704 C25 PUJ 32 PUJ C26 C25 C 0 1 N N N 13.962 18.955 48.195 -11.577 -2.611 1.370 C26 PUJ 33 PUJ C27 C26 C 0 1 N N N 13.177 18.644 46.978 -12.066 -3.260 2.666 C27 PUJ 34 PUJ C28 C27 C 0 1 Y N N 20.542 26.094 56.074 -1.155 1.819 -1.852 C28 PUJ 35 PUJ C29 C28 C 0 1 Y N N 21.397 26.836 56.869 -0.401 1.091 -2.750 C29 PUJ 36 PUJ C30 C29 C 0 1 Y N N 22.502 27.487 56.329 0.748 0.429 -2.325 C30 PUJ 37 PUJ C31 C30 C 0 1 N N N 23.377 28.308 57.250 1.557 -0.345 -3.289 C31 PUJ 38 PUJ O4 O4 O 0 1 N N N 23.290 29.556 57.180 2.561 -0.919 -2.918 O4 PUJ 39 PUJ O5 O5 O 0 1 N N N 24.108 27.701 58.045 1.181 -0.415 -4.581 O5 PUJ 40 PUJ C32 C31 C 0 1 N N N 24.971 27.203 53.876 2.179 -1.561 -0.408 C32 PUJ 41 PUJ C33 C32 C 0 1 N N N 25.019 25.880 54.405 0.914 -2.122 -0.733 C33 PUJ 42 PUJ C34 C33 C 0 1 N N N 26.032 25.022 54.085 0.692 -3.449 -0.646 C34 PUJ 43 PUJ C35 C34 C 0 1 N N N 27.043 25.412 53.214 1.760 -4.351 -0.209 C35 PUJ 44 PUJ C36 C35 C 0 1 N N N 28.333 23.144 53.476 0.431 -6.571 -0.358 C36 PUJ 45 PUJ C37 C36 C 0 1 N N N 29.185 22.920 52.170 1.049 -7.517 0.681 C37 PUJ 46 PUJ F2 F2 F 0 1 N N N 30.455 22.498 52.385 0.657 -7.258 1.998 F2 PUJ 47 PUJ C38 C37 C 0 1 N N N 28.993 24.435 51.742 2.359 -6.829 0.261 C38 PUJ 48 PUJ C39 C38 C 0 1 N N N 27.004 26.707 52.656 3.065 -3.763 0.125 C39 PUJ 49 PUJ C40 C39 C 0 1 N N N 25.965 27.603 52.959 3.219 -2.444 0.003 C40 PUJ 50 PUJ H1 H1 H 0 1 N N N 24.825 32.014 52.103 6.709 0.736 0.721 H1 PUJ 51 PUJ H2 H2 H 0 1 N N N 21.846 29.497 55.112 2.349 2.490 -0.831 H2 PUJ 52 PUJ H3 H3 H 0 1 N N N 22.083 34.392 54.947 5.254 4.406 1.704 H3 PUJ 53 PUJ H4 H4 H 0 1 N N N 20.803 34.071 53.729 6.116 5.475 0.514 H4 PUJ 54 PUJ H5 H5 H 0 1 N N N 21.699 35.771 52.252 8.296 5.002 1.533 H5 PUJ 55 PUJ H6 H6 H 0 1 N N N 23.220 34.215 51.156 8.425 2.566 1.273 H6 PUJ 56 PUJ H7 H7 H 0 1 N N N 24.498 34.535 52.377 6.912 2.316 2.250 H7 PUJ 57 PUJ H8 H8 H 0 1 N N N 21.398 31.842 54.674 4.202 4.014 -0.439 H8 PUJ 58 PUJ H10 H10 H 0 1 N N N 19.195 24.065 55.314 -2.962 3.263 -0.912 H10 PUJ 59 PUJ H11 H11 H 0 1 N N N 27.622 30.155 53.838 6.242 -1.454 2.427 H11 PUJ 60 PUJ H12 H12 H 0 1 N N N 28.351 29.681 52.266 4.513 -1.540 2.841 H12 PUJ 61 PUJ H13 H13 H 0 1 N N N 27.445 31.225 52.406 5.381 -3.010 2.335 H13 PUJ 62 PUJ H14 H14 H 0 1 N N N 24.835 28.857 50.103 6.277 -3.336 -0.541 H14 PUJ 63 PUJ H15 H15 H 0 1 N N N 25.718 30.421 50.093 5.937 -2.059 -1.734 H15 PUJ 64 PUJ H16 H16 H 0 1 N N N 26.625 28.877 49.953 7.137 -1.780 -0.450 H16 PUJ 65 PUJ H17 H17 H 0 1 N N N 22.049 26.550 53.092 0.666 1.302 0.968 H17 PUJ 66 PUJ H18 H18 H 0 1 N N N 17.467 23.806 53.173 -3.865 3.438 1.758 H18 PUJ 67 PUJ H19 H19 H 0 1 N N N 18.954 22.939 52.658 -2.896 4.887 1.397 H19 PUJ 68 PUJ H20 H20 H 0 1 N N N 17.080 22.337 54.959 -5.249 5.357 0.913 H20 PUJ 69 PUJ H21 H21 H 0 1 N N N 18.782 21.762 54.983 -4.342 5.293 -0.617 H21 PUJ 70 PUJ H22 H22 H 0 1 N N N 18.844 19.671 54.372 -7.304 4.775 -0.281 H22 PUJ 71 PUJ H23 H23 H 0 1 N N N 19.505 20.420 52.879 -6.396 4.711 -1.811 H23 PUJ 72 PUJ H24 H24 H 0 1 N N N 17.257 18.395 53.108 -8.386 3.298 -2.001 H24 PUJ 73 PUJ H25 H25 H 0 1 N N N 18.879 18.161 52.373 -6.938 2.263 -1.974 H25 PUJ 74 PUJ H26 H26 H 0 1 N N N 19.266 18.488 50.493 -9.730 1.439 -1.149 H26 PUJ 75 PUJ H27 H27 H 0 1 N N N 18.853 20.120 49.868 -8.282 0.405 -1.122 H27 PUJ 76 PUJ H28 H28 H 0 1 N N N 17.363 17.519 49.363 -8.503 0.160 1.336 H28 PUJ 77 PUJ H29 H29 H 0 1 N N N 18.385 18.425 48.195 -9.951 1.194 1.309 H29 PUJ 78 PUJ H30 H30 H 0 1 N N N 16.741 19.851 47.657 -11.083 -0.428 -0.187 H30 PUJ 79 PUJ H31 H31 H 0 1 N N N 16.114 19.940 49.338 -9.635 -1.463 -0.160 H31 PUJ 80 PUJ H32 H32 H 0 1 N N N 15.336 17.498 48.873 -9.856 -1.708 2.298 H32 PUJ 81 PUJ H33 H33 H 0 1 N N N 15.517 17.975 47.151 -11.304 -0.673 2.271 H33 PUJ 82 PUJ H34 H34 H 0 1 N N N 14.065 20.047 48.278 -12.435 -2.296 0.775 H34 PUJ 83 PUJ H35 H35 H 0 1 N N N 13.420 18.570 49.072 -10.987 -3.330 0.803 H35 PUJ 84 PUJ H36 H36 H 0 1 N N N 12.186 19.116 47.050 -12.656 -2.541 3.233 H36 PUJ 85 PUJ H37 H37 H 0 1 N N N 13.704 19.031 46.093 -12.682 -4.128 2.428 H37 PUJ 86 PUJ H38 H38 H 0 1 N N N 13.059 17.554 46.887 -11.208 -3.576 3.260 H38 PUJ 87 PUJ H39 H39 H 0 1 N N N 19.696 25.594 56.522 -2.045 2.331 -2.188 H39 PUJ 88 PUJ H40 H40 H 0 1 N N N 21.203 26.911 57.929 -0.703 1.035 -3.786 H40 PUJ 89 PUJ H41 H41 H 0 1 N N N 24.581 28.326 58.581 1.742 -0.933 -5.174 H41 PUJ 90 PUJ H42 H42 H 0 1 N N N 24.238 25.549 55.073 0.114 -1.473 -1.056 H42 PUJ 91 PUJ H43 H43 H 0 1 N N N 26.048 24.030 54.513 -0.279 -3.849 -0.898 H43 PUJ 92 PUJ H44 H44 H 0 1 N N N 27.458 22.486 53.588 -0.533 -6.163 -0.053 H44 PUJ 93 PUJ H45 H45 H 0 1 N N N 28.904 23.158 54.416 0.414 -6.984 -1.367 H45 PUJ 94 PUJ H46 H46 H 0 1 N N N 28.631 22.271 51.476 0.993 -8.573 0.414 H46 PUJ 95 PUJ H47 H47 H 0 1 N N N 29.884 25.072 51.843 2.853 -7.312 -0.582 H47 PUJ 96 PUJ H48 H48 H 0 1 N N N 28.539 24.594 50.753 3.035 -6.638 1.094 H48 PUJ 97 PUJ H49 H49 H 0 1 N N N 27.789 27.016 51.982 3.879 -4.385 0.466 H49 PUJ 98 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PUJ C27 C26 SING N N 1 PUJ C25 C26 SING N N 2 PUJ C25 C24 SING N N 3 PUJ C24 C23 SING N N 4 PUJ C23 C22 SING N N 5 PUJ C22 O3 SING N N 6 PUJ C1 SI1 SING N N 7 PUJ O3 C21 SING N N 8 PUJ C38 C37 SING N N 9 PUJ C38 N3 SING N N 10 PUJ C37 F2 SING N N 11 PUJ C37 C36 SING N N 12 PUJ C9 C8 SING N N 13 PUJ C9 N1 SING N N 14 PUJ SI1 C3 SING N N 15 PUJ SI1 C40 SING N N 16 PUJ SI1 C4 SING N N 17 PUJ C21 C20 SING N N 18 PUJ O1 C17 DOUB N N 19 PUJ C39 C40 DOUB N N 20 PUJ C39 C35 SING N N 21 PUJ C5 C4 DOUB Y N 22 PUJ C5 C6 SING Y N 23 PUJ N3 C35 DOUB N N 24 PUJ N3 C36 SING N N 25 PUJ C8 F1 SING N N 26 PUJ C8 C7 SING N N 27 PUJ C40 C32 SING N N 28 PUJ C4 C12 SING Y N 29 PUJ N1 C6 SING N N 30 PUJ N1 C7 SING N N 31 PUJ C35 C34 SING N N 32 PUJ C6 C10 DOUB Y N 33 PUJ C20 O2 SING N N 34 PUJ O2 C19 SING N N 35 PUJ C18 N2 SING N N 36 PUJ C18 C19 SING N N 37 PUJ C17 N2 SING N N 38 PUJ C17 C16 SING N N 39 PUJ C32 C13 DOUB N N 40 PUJ C32 C33 SING N N 41 PUJ C12 C13 SING N N 42 PUJ C12 C11 DOUB Y N 43 PUJ C34 C33 DOUB N N 44 PUJ C15 C16 DOUB Y N 45 PUJ C15 C14 SING Y N 46 PUJ C10 C11 SING Y N 47 PUJ C13 C14 SING N N 48 PUJ C16 C28 SING Y N 49 PUJ C14 C30 DOUB Y N 50 PUJ C28 C29 DOUB Y N 51 PUJ C30 C29 SING Y N 52 PUJ C30 C31 SING N N 53 PUJ O4 C31 DOUB N N 54 PUJ C31 O5 SING N N 55 PUJ C5 H1 SING N N 56 PUJ C11 H2 SING N N 57 PUJ C7 H3 SING N N 58 PUJ C7 H4 SING N N 59 PUJ C8 H5 SING N N 60 PUJ C9 H6 SING N N 61 PUJ C9 H7 SING N N 62 PUJ C10 H8 SING N N 63 PUJ N2 H10 SING N N 64 PUJ C3 H11 SING N N 65 PUJ C3 H12 SING N N 66 PUJ C3 H13 SING N N 67 PUJ C1 H14 SING N N 68 PUJ C1 H15 SING N N 69 PUJ C1 H16 SING N N 70 PUJ C15 H17 SING N N 71 PUJ C18 H18 SING N N 72 PUJ C18 H19 SING N N 73 PUJ C19 H20 SING N N 74 PUJ C19 H21 SING N N 75 PUJ C20 H22 SING N N 76 PUJ C20 H23 SING N N 77 PUJ C21 H24 SING N N 78 PUJ C21 H25 SING N N 79 PUJ C22 H26 SING N N 80 PUJ C22 H27 SING N N 81 PUJ C23 H28 SING N N 82 PUJ C23 H29 SING N N 83 PUJ C24 H30 SING N N 84 PUJ C24 H31 SING N N 85 PUJ C25 H32 SING N N 86 PUJ C25 H33 SING N N 87 PUJ C26 H34 SING N N 88 PUJ C26 H35 SING N N 89 PUJ C27 H36 SING N N 90 PUJ C27 H37 SING N N 91 PUJ C27 H38 SING N N 92 PUJ C28 H39 SING N N 93 PUJ C29 H40 SING N N 94 PUJ O5 H41 SING N N 95 PUJ C33 H42 SING N N 96 PUJ C34 H43 SING N N 97 PUJ C36 H44 SING N N 98 PUJ C36 H45 SING N N 99 PUJ C37 H46 SING N N 100 PUJ C38 H47 SING N N 101 PUJ C38 H48 SING N N 102 PUJ C39 H49 SING N N 103 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PUJ SMILES ACDLabs 12.01 "c15c(ccc(c1)N2CC(F)C2)C(c3c(ccc(c3)C(NCCOCCOCCCCCC)=O)C(O)=O)=C6C=C\C(=[N+]4/CC(F)C4)C=C6[Si]5(C)C" PUJ InChI InChI 1.03 "InChI=1S/C39H47F2N3O5Si/c1-4-5-6-7-15-48-17-18-49-16-14-42-38(45)26-8-11-31(39(46)47)34(19-26)37-32-12-9-29(43-22-27(40)23-43)20-35(32)50(2,3)36-21-30(10-13-33(36)37)44-24-28(41)25-44/h8-13,19-21,27-28H,4-7,14-18,22-25H2,1-3H3,(H-,42,45,46,47)/p+1" PUJ InChIKey InChI 1.03 WMFJHJNMBLRDFB-UHFFFAOYSA-O PUJ SMILES_CANONICAL CACTVS 3.385 "CCCCCCOCCOCCNC(=O)c1ccc(C(O)=O)c(c1)C2=C3C=C[C](C=C3[Si](C)(C)c4cc(ccc24)N5CC(F)C5)=[N+]6C[CH](F)C6" PUJ SMILES CACTVS 3.385 "CCCCCCOCCOCCNC(=O)c1ccc(C(O)=O)c(c1)C2=C3C=C[C](C=C3[Si](C)(C)c4cc(ccc24)N5CC(F)C5)=[N+]6C[CH](F)C6" PUJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCCOCCOCCNC(=O)c1ccc(c(c1)C2=C3C=CC(=[N+]4CC(C4)F)C=C3[Si](c5c2ccc(c5)N6CC(C6)F)(C)C)C(=O)O" PUJ SMILES "OpenEye OEToolkits" 2.0.7 "CCCCCCOCCOCCNC(=O)c1ccc(c(c1)C2=C3C=CC(=[N+]4CC(C4)F)C=C3[Si](c5c2ccc(c5)N6CC(C6)F)(C)C)C(=O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PUJ "SYSTEMATIC NAME" ACDLabs 12.01 "(1E,3S)-1-{10-[2-carboxy-5-({2-[2-(hexyloxy)ethoxy]ethyl}carbamoyl)phenyl]-7-(3-fluoroazetidin-1-yl)-5,5-dimethyldibenzo[b,e]silin-3(5H)-ylidene}-3-fluoroazetidin-1-ium" PUJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[3-(3-fluoranylazetidin-1-ium-1-ylidene)-7-(3-fluoranylazetidin-1-yl)-5,5-dimethyl-benzo[b][1]benzosilin-10-yl]-4-[2-(2-hexoxyethoxy)ethylcarbamoyl]benzoic acid" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id PUJ _pdbx_chem_comp_synonyms.name JF635 _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site PUJ "Create component" 2019-08-23 RCSB PUJ "Modify synonyms" 2020-06-05 PDBE PUJ "Initial release" 2020-09-30 RCSB ##