data_Q8E # _chem_comp.id Q8E _chem_comp.name "~{N}-[(6-methoxypyridin-3-yl)methyl]-2-selanyl-benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H14 N2 O2 Se" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-05-26 _chem_comp.pdbx_modified_date 2020-09-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 321.233 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Q8E _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6Z4M _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Q8E C1 C1 C 0 1 Y N N 1.495 -0.423 9.248 2.153 -3.221 -0.094 C1 Q8E 1 Q8E C2 C2 C 0 1 Y N N 1.860 -1.605 8.588 3.522 -3.027 -0.038 C2 Q8E 2 Q8E C3 C3 C 0 1 Y N N 1.836 -1.684 7.195 4.044 -1.747 0.016 C3 Q8E 3 Q8E C4 C4 C 0 1 Y N N 1.421 -0.623 6.376 3.202 -0.655 0.014 C4 Q8E 4 Q8E C5 C5 C 0 1 Y N N 1.050 0.619 7.125 1.820 -0.843 -0.043 C5 Q8E 5 Q8E C6 C6 C 0 1 N N N 0.608 1.796 6.319 0.912 0.324 -0.047 C6 Q8E 6 Q8E C7 C7 C 0 1 N N N 0.794 4.275 6.093 -1.322 1.294 -0.105 C7 Q8E 7 Q8E O O1 O 0 1 N N N -0.054 1.526 5.292 1.368 1.449 0.001 O Q8E 8 Q8E SE SE1 SE 0 0 N N N 1.314 -0.609 4.713 3.944 1.158 0.099 SE Q8E 9 Q8E C C8 C 0 1 Y N N 1.101 0.683 8.529 1.300 -2.137 -0.103 C Q8E 10 Q8E N N1 N 0 1 N N N 1.022 3.008 6.761 -0.422 0.139 -0.102 N Q8E 11 Q8E C8 C9 C 0 1 Y N N 1.722 4.642 4.920 -2.751 0.818 -0.172 C8 Q8E 12 Q8E C10 C10 C 0 1 Y N N 1.899 5.991 4.629 -3.457 0.566 0.987 C10 Q8E 13 Q8E N1 N2 N 0 1 Y N N 2.708 6.392 3.637 -4.708 0.149 0.940 N1 Q8E 14 Q8E C11 C11 C 0 1 Y N N 3.364 5.485 2.836 -5.332 -0.043 -0.211 C11 Q8E 15 Q8E O1 O2 O 0 1 N N N 4.169 5.908 1.794 -6.617 -0.478 -0.213 O1 Q8E 16 Q8E C13 C12 C 0 1 N N N 4.329 7.264 1.349 -7.229 -0.701 1.059 C13 Q8E 17 Q8E C12 C13 C 0 1 Y N N 3.213 4.112 3.078 -4.683 0.191 -1.416 C12 Q8E 18 Q8E C9 C14 C 0 1 Y N N 2.375 3.682 4.115 -3.372 0.634 -1.400 C9 Q8E 19 Q8E H1 H1 H 0 1 N N N 1.523 -0.380 10.327 1.752 -4.222 -0.136 H1 Q8E 20 Q8E H2 H2 H 0 1 N N N 2.164 -2.466 9.165 4.186 -3.879 -0.035 H2 Q8E 21 Q8E H3 H3 H 0 1 N N N 2.151 -2.604 6.726 5.114 -1.603 0.061 H3 Q8E 22 Q8E H4 H4 H 0 1 N N N 0.891 5.068 6.850 -1.174 1.873 0.807 H4 Q8E 23 Q8E H5 H5 H 0 1 N N N -0.236 4.262 5.706 -1.107 1.920 -0.971 H5 Q8E 24 Q8E H6 H6 H 0 1 N N N 1.718 -1.910 4.188 4.000 1.385 1.641 H6 Q8E 25 Q8E H7 H7 H 0 1 N N N 0.832 1.595 9.041 0.232 -2.289 -0.148 H7 Q8E 26 Q8E H8 H8 H 0 1 N N N 1.529 3.031 7.623 -0.786 -0.760 -0.140 H8 Q8E 27 Q8E H9 H9 H 0 1 N N N 1.374 6.731 5.214 -2.980 0.712 1.945 H9 Q8E 28 Q8E H10 H10 H 0 1 N N N 5.032 7.292 0.503 -8.253 -1.045 0.914 H10 Q8E 29 Q8E H11 H11 H 0 1 N N N 3.355 7.662 1.030 -6.666 -1.456 1.606 H11 Q8E 30 Q8E H12 H12 H 0 1 N N N 4.723 7.876 2.174 -7.236 0.230 1.627 H12 Q8E 31 Q8E H13 H13 H 0 1 N N N 3.739 3.391 2.469 -5.195 0.032 -2.353 H13 Q8E 32 Q8E H14 H14 H 0 1 N N N 2.230 2.627 4.297 -2.842 0.825 -2.321 H14 Q8E 33 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Q8E C13 O1 SING N N 1 Q8E O1 C11 SING N N 2 Q8E C11 C12 DOUB Y N 3 Q8E C11 N1 SING Y N 4 Q8E C12 C9 SING Y N 5 Q8E N1 C10 DOUB Y N 6 Q8E C9 C8 DOUB Y N 7 Q8E C10 C8 SING Y N 8 Q8E SE C4 SING N N 9 Q8E C8 C7 SING N N 10 Q8E O C6 DOUB N N 11 Q8E C7 N SING N N 12 Q8E C6 N SING N N 13 Q8E C6 C5 SING N N 14 Q8E C4 C5 DOUB Y N 15 Q8E C4 C3 SING Y N 16 Q8E C5 C SING Y N 17 Q8E C3 C2 DOUB Y N 18 Q8E C C1 DOUB Y N 19 Q8E C2 C1 SING Y N 20 Q8E C1 H1 SING N N 21 Q8E C2 H2 SING N N 22 Q8E C3 H3 SING N N 23 Q8E C7 H4 SING N N 24 Q8E C7 H5 SING N N 25 Q8E SE H6 SING N N 26 Q8E C H7 SING N N 27 Q8E N H8 SING N N 28 Q8E C10 H9 SING N N 29 Q8E C13 H10 SING N N 30 Q8E C13 H11 SING N N 31 Q8E C13 H12 SING N N 32 Q8E C12 H13 SING N N 33 Q8E C9 H14 SING N N 34 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Q8E InChI InChI 1.03 "InChI=1S/C14H14N2O2Se/c1-18-13-7-6-10(8-15-13)9-16-14(17)11-4-2-3-5-12(11)19/h2-8,19H,9H2,1H3,(H,16,17)" Q8E InChIKey InChI 1.03 SGEBTMJCWYBJSF-UHFFFAOYSA-N Q8E SMILES_CANONICAL CACTVS 3.385 "COc1ccc(CNC(=O)c2ccccc2[SeH])cn1" Q8E SMILES CACTVS 3.385 "COc1ccc(CNC(=O)c2ccccc2[SeH])cn1" Q8E SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccc(cn1)CNC(=O)c2ccccc2[SeH]" Q8E SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccc(cn1)CNC(=O)c2ccccc2[SeH]" # _pdbx_chem_comp_identifier.comp_id Q8E _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(6-methoxypyridin-3-yl)methyl]-2-selanyl-benzamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Q8E "Create component" 2020-05-26 PDBE Q8E "Initial release" 2020-09-16 RCSB ##