data_Q9H # _chem_comp.id Q9H _chem_comp.name "(2~{R},3~{R},4~{S},5~{R})-2-[6-azanyl-8-[3-[[(2~{R},3~{S},4~{R},5~{R})-5-[6-(2-azanylethylamino)purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy]prop-1-ynyl]purin-9-yl]-5-(hydroxymethyl)oxolane-3,4-diol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H31 N11 O8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-05-28 _chem_comp.pdbx_modified_date 2021-05-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 613.583 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Q9H _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6Z61 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Q9H O3 O1 O 0 1 N N N 15.436 7.293 12.136 -4.240 4.219 -0.533 O3 Q9H 1 Q9H C4 C1 C 0 1 Y N N 14.904 6.884 7.027 5.337 0.205 0.473 C4 Q9H 2 Q9H C5 C2 C 0 1 Y N N 16.706 5.939 7.853 4.244 -0.393 -1.347 C5 Q9H 3 Q9H O4 O2 O 0 1 N N N 18.797 6.906 15.534 -4.189 1.999 3.521 O4 Q9H 4 Q9H C6 C3 C 0 1 Y N N 15.079 5.594 6.549 5.965 -0.899 -0.129 C6 Q9H 5 Q9H N1 N1 N 0 1 N N N 14.147 3.936 5.048 7.782 -2.504 -0.066 N1 Q9H 6 Q9H C7 C4 C 0 1 N N R 16.312 8.320 8.596 3.288 1.579 -0.095 C7 Q9H 7 Q9H C8 C5 C 0 1 N N R 14.887 9.809 9.691 1.366 2.546 -0.896 C8 Q9H 8 Q9H N2 N2 N 0 1 Y N N 13.050 5.949 5.363 7.561 -0.844 1.595 N2 Q9H 9 Q9H C9 C6 C 0 1 N N N 13.511 9.809 10.309 0.304 2.464 -1.994 C9 Q9H 10 Q9H O5 O3 O 0 1 N N N 19.130 9.543 16.031 -4.199 -0.557 3.037 O5 Q9H 11 Q9H C10 C7 C 0 1 N N N 13.863 10.576 12.517 -1.804 1.458 -2.528 C10 Q9H 12 Q9H O6 O4 O 0 1 N N N 15.057 11.703 8.176 2.267 4.809 -0.683 O6 Q9H 13 Q9H C11 C8 C 0 1 N N N 15.310 10.764 12.639 -2.837 0.556 -1.991 C11 Q9H 14 Q9H C12 C9 C 0 1 N N N 16.485 10.958 12.664 -3.660 -0.163 -1.563 C12 Q9H 15 Q9H N3 N3 N 0 1 Y N N 13.903 7.716 6.764 5.849 0.710 1.590 N3 Q9H 16 Q9H C13 C10 C 0 1 Y N N 17.854 11.340 12.577 -4.664 -1.041 -1.041 C13 Q9H 17 Q9H O7 O5 O 0 1 N N N 17.412 10.419 8.029 4.398 3.736 0.205 O7 Q9H 18 Q9H C14 C11 C 0 1 Y N N 19.661 12.377 12.132 -6.007 -2.739 -0.835 C14 Q9H 19 Q9H C15 C12 C 0 1 Y N N 20.691 13.242 11.712 -6.763 -3.922 -0.928 C15 Q9H 20 Q9H N4 N4 N 0 1 Y N N 15.984 7.096 7.864 4.255 0.501 -0.317 N4 Q9H 21 Q9H N N5 N 0 1 N N N 13.063 3.846 1.494 10.721 -4.751 0.434 N Q9H 22 Q9H C C13 C 0 1 N N N 13.947 3.598 2.635 9.516 -4.222 -0.217 C Q9H 23 Q9H O O6 O 0 1 N N N 15.389 8.459 9.659 2.037 1.276 -0.749 O Q9H 24 Q9H C1 C14 C 0 1 N N N 13.218 3.524 4.010 8.984 -3.032 0.584 C1 Q9H 25 Q9H C16 C15 C 0 1 Y N N 22.185 11.681 12.536 -7.837 -3.348 1.033 C16 Q9H 26 Q9H C17 C16 C 0 1 Y N N 20.047 11.195 12.739 -6.238 -1.888 0.261 C17 Q9H 27 Q9H C18 C17 C 0 1 N N R 18.761 9.218 13.657 -5.260 0.325 1.007 C18 Q9H 28 Q9H C19 C18 C 0 1 N N R 17.258 7.434 13.727 -4.464 2.495 1.147 C19 Q9H 29 Q9H C2 C19 C 0 1 Y N N 14.080 5.136 5.650 7.120 -1.419 0.481 C2 Q9H 30 Q9H C20 C20 C 0 1 N N N 15.767 7.522 13.499 -3.500 3.399 0.375 C20 Q9H 31 Q9H C21 C21 C 0 1 N N S 17.714 7.748 15.155 -3.691 1.698 2.216 C21 Q9H 32 Q9H C22 C22 C 0 1 N N R 18.151 9.210 15.054 -3.969 0.217 1.858 C22 Q9H 33 Q9H C23 C23 C 0 1 N N S 14.978 10.283 8.248 2.481 3.537 -1.298 C23 Q9H 34 Q9H C24 C24 C 0 1 N N R 16.269 9.614 7.763 3.775 2.886 -0.759 C24 Q9H 35 Q9H C3 C25 C 0 1 Y N N 13.021 7.160 5.928 6.933 0.190 2.126 C3 Q9H 36 Q9H N10 N6 N 0 1 Y N N 18.872 10.522 13.028 -5.383 -0.825 0.109 N10 Q9H 37 Q9H N5 N7 N 0 1 Y N N 16.206 5.004 7.072 5.248 -1.213 -1.234 N5 Q9H 38 Q9H N6 N8 N 0 1 Y N N 18.278 12.466 12.036 -5.042 -2.171 -1.592 N6 Q9H 39 Q9H N7 N9 N 0 1 N N N 20.477 14.410 11.098 -6.580 -4.799 -1.982 N7 Q9H 40 Q9H N8 N10 N 0 1 Y N N 21.965 12.854 11.934 -7.656 -4.179 0.022 N8 Q9H 41 Q9H N9 N11 N 0 1 Y N N 21.297 10.786 12.975 -7.154 -2.230 1.161 N9 Q9H 42 Q9H O1 O7 O 0 1 N N N 13.386 10.900 11.216 -0.755 1.604 -1.569 O1 Q9H 43 Q9H O2 O8 O 0 1 N N N 17.931 8.386 12.870 -5.067 1.543 0.255 O2 Q9H 44 Q9H H1 H1 H 0 1 N N N 14.495 7.355 12.024 -3.692 4.818 -1.057 H1 Q9H 45 Q9H H2 H2 H 0 1 N N N 17.607 5.802 8.433 3.510 -0.417 -2.138 H2 Q9H 46 Q9H H3 H3 H 0 1 N N N 19.066 7.115 16.421 -4.093 2.927 3.774 H3 Q9H 47 Q9H H4 H4 H 0 1 N N N 14.066 3.256 5.777 7.450 -2.915 -0.879 H4 Q9H 48 Q9H H5 H5 H 0 1 N N N 17.327 8.222 9.007 3.131 1.732 0.973 H5 Q9H 49 Q9H H6 H6 H 0 1 N N N 15.550 10.435 10.307 0.912 2.846 0.049 H6 Q9H 50 Q9H H7 H7 H 0 1 N N N 12.755 9.906 9.516 -0.093 3.460 -2.190 H7 Q9H 51 Q9H H8 H8 H 0 1 N N N 13.355 8.865 10.851 0.753 2.067 -2.904 H8 Q9H 52 Q9H H9 H9 H 0 1 N N N 18.733 9.533 16.894 -3.421 -0.654 3.603 H9 Q9H 53 Q9H H10 H10 H 0 1 N N N 13.359 11.223 13.250 -1.400 1.039 -3.449 H10 Q9H 54 Q9H H11 H11 H 0 1 N N N 13.623 9.524 12.730 -2.246 2.433 -2.735 H11 Q9H 55 Q9H H12 H12 H 0 1 N N N 14.242 12.082 8.483 2.938 5.470 -0.902 H12 Q9H 56 Q9H H13 H13 H 0 1 N N N 18.192 9.976 7.716 4.669 4.596 -0.145 H13 Q9H 57 Q9H H14 H14 H 0 1 N N N 13.604 3.879 0.654 11.092 -5.538 -0.076 H14 Q9H 58 Q9H H15 H15 H 0 1 N N N 12.390 3.110 1.428 11.419 -4.030 0.545 H15 Q9H 59 Q9H H17 H17 H 0 1 N N N 14.464 2.642 2.468 9.762 -3.898 -1.228 H17 Q9H 60 Q9H H18 H18 H 0 1 N N N 14.686 4.411 2.681 8.755 -5.000 -0.261 H18 Q9H 61 Q9H H19 H19 H 0 1 N N N 12.347 4.195 4.004 9.745 -2.253 0.628 H19 Q9H 62 Q9H H20 H20 H 0 1 N N N 12.885 2.493 4.198 8.738 -3.356 1.595 H20 Q9H 63 Q9H H21 H21 H 0 1 N N N 23.222 11.422 12.688 -8.574 -3.595 1.783 H21 Q9H 64 Q9H H22 H22 H 0 1 N N N 19.764 8.771 13.725 -6.137 0.406 1.648 H22 Q9H 65 Q9H H23 H23 H 0 1 N N N 17.591 6.416 13.474 -5.237 3.099 1.622 H23 Q9H 66 Q9H H24 H24 H 0 1 N N N 15.419 8.525 13.788 -2.795 2.784 -0.183 H24 Q9H 67 Q9H H25 H25 H 0 1 N N N 15.265 6.766 14.121 -2.956 4.032 1.075 H25 Q9H 68 Q9H H26 H26 H 0 1 N N N 16.866 7.655 15.850 -2.625 1.913 2.156 H26 Q9H 69 Q9H H27 H27 H 0 1 N N N 17.278 9.877 15.098 -3.151 -0.202 1.273 H27 Q9H 70 Q9H H28 H28 H 0 1 N N N 14.122 9.900 7.673 2.526 3.641 -2.382 H28 Q9H 71 Q9H H29 H29 H 0 1 N N N 16.187 9.368 6.694 4.462 2.668 -1.577 H29 Q9H 72 Q9H H30 H30 H 0 1 N N N 12.169 7.773 5.674 7.326 0.627 3.032 H30 Q9H 73 Q9H H31 H31 H 0 1 N N N 21.354 14.841 10.886 -7.106 -5.612 -2.034 H31 Q9H 74 Q9H H32 H32 H 0 1 N N N 19.969 14.253 10.251 -5.924 -4.601 -2.670 H32 Q9H 75 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Q9H N C SING N N 1 Q9H C C1 SING N N 2 Q9H C1 N1 SING N N 3 Q9H N1 C2 SING N N 4 Q9H N2 C2 DOUB Y N 5 Q9H N2 C3 SING Y N 6 Q9H C2 C6 SING Y N 7 Q9H C3 N3 DOUB Y N 8 Q9H C6 C4 DOUB Y N 9 Q9H C6 N5 SING Y N 10 Q9H N3 C4 SING Y N 11 Q9H C4 N4 SING Y N 12 Q9H N5 C5 DOUB Y N 13 Q9H C24 O7 SING N N 14 Q9H C24 C23 SING N N 15 Q9H C24 C7 SING N N 16 Q9H C5 N4 SING Y N 17 Q9H N4 C7 SING N N 18 Q9H O6 C23 SING N N 19 Q9H C23 C8 SING N N 20 Q9H C7 O SING N N 21 Q9H O C8 SING N N 22 Q9H C8 C9 SING N N 23 Q9H C9 O1 SING N N 24 Q9H N7 C15 SING N N 25 Q9H O1 C10 SING N N 26 Q9H C15 N8 DOUB Y N 27 Q9H C15 C14 SING Y N 28 Q9H N8 C16 SING Y N 29 Q9H N6 C14 SING Y N 30 Q9H N6 C13 DOUB Y N 31 Q9H C14 C17 DOUB Y N 32 Q9H O3 C20 SING N N 33 Q9H C10 C11 SING N N 34 Q9H C16 N9 DOUB Y N 35 Q9H C13 C12 SING N N 36 Q9H C13 N10 SING Y N 37 Q9H C11 C12 TRIP N N 38 Q9H C17 N9 SING Y N 39 Q9H C17 N10 SING Y N 40 Q9H O2 C18 SING N N 41 Q9H O2 C19 SING N N 42 Q9H N10 C18 SING N N 43 Q9H C20 C19 SING N N 44 Q9H C18 C22 SING N N 45 Q9H C19 C21 SING N N 46 Q9H C22 C21 SING N N 47 Q9H C22 O5 SING N N 48 Q9H C21 O4 SING N N 49 Q9H O3 H1 SING N N 50 Q9H C5 H2 SING N N 51 Q9H O4 H3 SING N N 52 Q9H N1 H4 SING N N 53 Q9H C7 H5 SING N N 54 Q9H C8 H6 SING N N 55 Q9H C9 H7 SING N N 56 Q9H C9 H8 SING N N 57 Q9H O5 H9 SING N N 58 Q9H C10 H10 SING N N 59 Q9H C10 H11 SING N N 60 Q9H O6 H12 SING N N 61 Q9H O7 H13 SING N N 62 Q9H N H14 SING N N 63 Q9H N H15 SING N N 64 Q9H C H17 SING N N 65 Q9H C H18 SING N N 66 Q9H C1 H19 SING N N 67 Q9H C1 H20 SING N N 68 Q9H C16 H21 SING N N 69 Q9H C18 H22 SING N N 70 Q9H C19 H23 SING N N 71 Q9H C20 H24 SING N N 72 Q9H C20 H25 SING N N 73 Q9H C21 H26 SING N N 74 Q9H C22 H27 SING N N 75 Q9H C23 H28 SING N N 76 Q9H C24 H29 SING N N 77 Q9H C3 H30 SING N N 78 Q9H N7 H31 SING N N 79 Q9H N7 H32 SING N N 80 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Q9H InChI InChI 1.03 "InChI=1S/C25H31N11O8/c26-3-4-28-21-15-22(31-9-30-21)35(10-33-15)24-18(40)17(39)12(44-24)7-42-5-1-2-13-34-14-20(27)29-8-32-23(14)36(13)25-19(41)16(38)11(6-37)43-25/h8-12,16-19,24-25,37-41H,3-7,26H2,(H2,27,29,32)(H,28,30,31)/t11-,12-,16-,17-,18-,19-,24-,25-/m1/s1" Q9H InChIKey InChI 1.03 SCMIFBNZCXBOAA-AKONZDDMSA-N Q9H SMILES_CANONICAL CACTVS 3.385 "NCCNc1ncnc2n(cnc12)[C@@H]3O[C@H](COCC#Cc4nc5c(N)ncnc5n4[C@@H]6O[C@H](CO)[C@@H](O)[C@H]6O)[C@@H](O)[C@H]3O" Q9H SMILES CACTVS 3.385 "NCCNc1ncnc2n(cnc12)[CH]3O[CH](COCC#Cc4nc5c(N)ncnc5n4[CH]6O[CH](CO)[CH](O)[CH]6O)[CH](O)[CH]3O" Q9H SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1nc(c2c(n1)n(c(n2)C#CCOC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5NCCN)O)O)[C@H]6[C@@H]([C@@H]([C@H](O6)CO)O)O)N" Q9H SMILES "OpenEye OEToolkits" 2.0.7 "c1nc(c2c(n1)n(c(n2)C#CCOCC3C(C(C(O3)n4cnc5c4ncnc5NCCN)O)O)C6C(C(C(O6)CO)O)O)N" # _pdbx_chem_comp_identifier.comp_id Q9H _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R},3~{R},4~{S},5~{R})-2-[6-azanyl-8-[3-[[(2~{R},3~{S},4~{R},5~{R})-5-[6-(2-azanylethylamino)purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy]prop-1-ynyl]purin-9-yl]-5-(hydroxymethyl)oxolane-3,4-diol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Q9H "Create component" 2020-05-28 PDBE Q9H "Initial release" 2021-05-26 RCSB ##