data_QFC # _chem_comp.id QFC _chem_comp.name Mezigdomide _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C32 H30 F N5 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-06-08 _chem_comp.pdbx_modified_date 2022-07-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 567.610 _chem_comp.one_letter_code ? _chem_comp.three_letter_code QFC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8D7U _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal QFC N1 N1 N 0 1 N N N 142.747 143.106 65.931 -4.379 -1.492 -0.717 N1 QFC 1 QFC N3 N2 N 0 1 N N N 132.697 140.972 72.449 9.681 -1.649 1.135 N3 QFC 2 QFC C4 C1 C 0 1 Y N N 147.738 143.915 67.414 -8.520 0.663 -0.722 C4 QFC 3 QFC C5 C2 C 0 1 Y N N 146.432 144.348 67.615 -8.298 -0.414 0.130 C5 QFC 4 QFC C6 C3 C 0 1 N N N 144.597 144.704 66.028 -5.988 -0.109 0.505 C6 QFC 5 QFC C7 C4 C 0 1 N N N 143.656 143.927 65.130 -4.657 -0.861 0.581 C7 QFC 6 QFC C8 C5 C 0 1 N N N 141.771 142.413 65.083 -3.071 -2.162 -0.708 C8 QFC 7 QFC C10 C6 C 0 1 Y N N 140.071 144.256 65.324 -1.537 -0.753 0.680 C10 QFC 8 QFC C13 C7 C 0 1 N N N 136.354 144.305 66.042 1.108 1.796 -0.192 C13 QFC 9 QFC C15 C8 C 0 1 Y N N 136.657 146.307 68.051 3.334 3.316 0.034 C15 QFC 10 QFC C17 C9 C 0 1 Y N N 135.913 147.099 70.207 5.714 3.570 0.163 C17 QFC 11 QFC C20 C10 C 0 1 N N N 134.612 143.662 69.966 5.240 -0.043 -0.159 C20 QFC 12 QFC C21 C11 C 0 1 Y N N 135.370 144.865 69.487 4.740 1.377 -0.063 C21 QFC 13 QFC C22 C12 C 0 1 N N S 133.198 143.358 72.096 7.620 -1.110 -0.139 C22 QFC 14 QFC C24 C13 C 0 1 N N N 130.881 142.601 72.562 9.581 -2.105 -1.304 C24 QFC 15 QFC C26 C14 C 0 1 N N N 133.655 141.917 72.195 8.431 -1.165 1.129 C26 QFC 16 QFC C28 C15 C 0 1 Y N N 139.317 142.008 65.501 -1.431 -0.555 -1.703 C28 QFC 17 QFC N N3 N 0 1 N N N 145.344 143.797 66.904 -7.058 -1.048 0.139 N QFC 18 QFC C C16 C 0 1 Y N N 146.227 145.368 68.560 -9.313 -0.858 0.976 C QFC 19 QFC O O1 O 0 1 N N N 136.047 144.033 67.416 2.380 1.145 -0.189 O QFC 20 QFC C1 C17 C 0 1 Y N N 147.246 145.942 69.272 -10.540 -0.232 0.969 C1 QFC 21 QFC C11 C18 C 0 1 Y N N 138.784 144.706 65.551 -0.536 0.192 0.804 C11 QFC 22 QFC C12 C19 C 0 1 Y N N 137.744 143.814 65.761 0.017 0.764 -0.326 C12 QFC 23 QFC C14 C20 C 0 1 Y N N 136.048 145.086 68.291 3.478 1.938 -0.074 C14 QFC 24 QFC C16 C21 C 0 1 Y N N 136.585 147.309 69.011 4.450 4.124 0.152 C16 QFC 25 QFC C18 C22 C 0 1 Y N N 135.310 145.866 70.433 5.870 2.187 0.055 C18 QFC 26 QFC C19 C23 C 0 1 N N N 134.525 145.374 71.587 7.064 1.320 0.037 C19 QFC 27 QFC C2 C24 C 0 1 Y N N 148.545 145.490 69.049 -10.766 0.850 0.112 C2 QFC 28 QFC C23 C25 C 0 1 N N N 131.749 143.458 71.656 8.565 -0.954 -1.335 C23 QFC 29 QFC C25 C26 C 0 1 N N N 131.361 141.187 72.646 10.287 -2.100 0.026 C25 QFC 30 QFC C27 C27 C 0 1 Y N N 138.029 142.459 65.728 -0.430 0.391 -1.580 C27 QFC 31 QFC C29 C28 C 0 1 N N N 143.537 142.156 66.715 -5.449 -2.431 -1.083 C29 QFC 32 QFC C3 C29 C 0 1 Y N N 148.785 144.479 68.122 -9.745 1.293 -0.734 C3 QFC 33 QFC C30 C30 C 0 1 N N N 144.468 142.895 67.654 -6.780 -1.680 -1.159 C30 QFC 34 QFC C31 C31 C 0 1 N N N 149.639 146.070 69.787 -12.040 1.503 0.102 C31 QFC 35 QFC C9 C32 C 0 1 Y N N 140.359 142.900 65.300 -1.980 -1.131 -0.573 C9 QFC 36 QFC F F1 F 0 1 N N N 144.965 145.798 68.781 -9.093 -1.904 1.802 F QFC 37 QFC N2 N4 N 0 1 N N N 134.117 144.118 71.268 6.703 0.031 -0.086 N2 QFC 38 QFC N4 N5 N 0 1 N N N 150.485 146.548 70.387 -13.051 2.022 0.093 N4 QFC 39 QFC O1 O2 O 0 1 N N N 134.269 145.946 72.629 8.211 1.715 0.121 O1 QFC 40 QFC O2 O3 O 0 1 N N N 130.610 140.248 72.894 11.425 -2.511 0.097 O2 QFC 41 QFC O3 O4 O 0 1 N N N 134.838 141.610 72.091 7.943 -0.763 2.164 O3 QFC 42 QFC H2 H2 H 0 1 N N N 133.008 140.023 72.495 10.169 -1.670 1.974 H2 QFC 43 QFC H3 H3 H 0 1 N N N 147.937 143.131 66.698 -7.730 1.008 -1.372 H3 QFC 44 QFC H4 H4 H 0 1 N N N 145.306 145.270 65.405 -6.210 0.335 1.475 H4 QFC 45 QFC H5 H5 H 0 1 N N N 144.013 145.402 66.645 -5.920 0.676 -0.248 H5 QFC 46 QFC H6 H6 H 0 1 N N N 144.244 143.275 64.467 -4.716 -1.628 1.353 H6 QFC 47 QFC H7 H7 H 0 1 N N N 143.068 144.632 64.524 -3.857 -0.161 0.823 H7 QFC 48 QFC H8 H8 H 0 1 N N N 141.810 141.337 65.309 -3.023 -2.853 0.133 H8 QFC 49 QFC H9 H9 H 0 1 N N N 142.041 142.577 64.029 -2.938 -2.712 -1.639 H9 QFC 50 QFC H10 H10 H 0 1 N N N 140.864 144.971 65.163 -1.970 -1.200 1.563 H10 QFC 51 QFC H11 H11 H 0 1 N N N 136.298 145.388 65.856 0.977 2.343 0.742 H11 QFC 52 QFC H12 H12 H 0 1 N N N 135.637 143.783 65.391 1.057 2.490 -1.030 H12 QFC 53 QFC H13 H13 H 0 1 N N N 137.184 146.479 67.124 2.348 3.757 0.022 H13 QFC 54 QFC H14 H14 H 0 1 N N N 135.859 147.881 70.950 6.582 4.207 0.255 H14 QFC 55 QFC H15 H15 H 0 1 N N N 133.783 143.414 69.287 4.852 -0.632 0.672 H15 QFC 56 QFC H16 H16 H 0 1 N N N 135.272 142.789 70.072 4.934 -0.487 -1.107 H16 QFC 57 QFC H17 H17 H 0 1 N N N 133.248 143.776 73.112 7.047 -2.032 -0.245 H17 QFC 58 QFC H18 H18 H 0 1 N N N 130.888 143.036 73.572 9.068 -3.057 -1.440 H18 QFC 59 QFC H19 H19 H 0 1 N N N 129.853 142.602 72.170 10.309 -1.965 -2.103 H19 QFC 60 QFC H20 H20 H 0 1 N N N 139.513 140.946 65.480 -1.780 -0.846 -2.683 H20 QFC 61 QFC H21 H21 H 0 1 N N N 147.048 146.725 69.988 -11.327 -0.577 1.624 H21 QFC 62 QFC H22 H22 H 0 1 N N N 138.586 145.768 65.565 -0.187 0.484 1.783 H22 QFC 63 QFC H23 H23 H 0 1 N N N 137.057 148.262 68.824 4.332 5.194 0.236 H23 QFC 64 QFC H24 H24 H 0 1 N N N 131.419 144.506 71.717 7.993 -0.997 -2.262 H24 QFC 65 QFC H25 H25 H 0 1 N N N 131.656 143.104 70.619 9.086 0.001 -1.267 H25 QFC 66 QFC H26 H26 H 0 1 N N N 137.234 141.744 65.882 -0.001 0.841 -2.463 H26 QFC 67 QFC H27 H27 H 0 1 N N N 142.860 141.519 67.303 -5.227 -2.876 -2.053 H27 QFC 68 QFC H28 H28 H 0 1 N N N 144.131 141.529 66.034 -5.517 -3.216 -0.329 H28 QFC 69 QFC H29 H29 H 0 1 N N N 149.794 144.133 67.954 -9.916 2.129 -1.396 H29 QFC 70 QFC H30 H30 H 0 1 N N N 143.871 143.481 68.368 -7.579 -2.379 -1.401 H30 QFC 71 QFC H31 H31 H 0 1 N N N 145.083 142.166 68.202 -6.721 -0.913 -1.931 H31 QFC 72 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal QFC C8 C9 SING N N 1 QFC C8 N1 SING N N 2 QFC C7 N1 SING N N 3 QFC C7 C6 SING N N 4 QFC C9 C10 DOUB Y N 5 QFC C9 C28 SING Y N 6 QFC C10 C11 SING Y N 7 QFC C28 C27 DOUB Y N 8 QFC C11 C12 DOUB Y N 9 QFC C27 C12 SING Y N 10 QFC C12 C13 SING N N 11 QFC N1 C29 SING N N 12 QFC C6 N SING N N 13 QFC C13 O SING N N 14 QFC C29 C30 SING N N 15 QFC N C5 SING N N 16 QFC N C30 SING N N 17 QFC C4 C5 DOUB Y N 18 QFC C4 C3 SING Y N 19 QFC O C14 SING N N 20 QFC C5 C SING Y N 21 QFC C15 C14 DOUB Y N 22 QFC C15 C16 SING Y N 23 QFC C3 C2 DOUB Y N 24 QFC C14 C21 SING Y N 25 QFC C F SING N N 26 QFC C C1 DOUB Y N 27 QFC C16 C17 DOUB Y N 28 QFC C2 C1 SING Y N 29 QFC C2 C31 SING N N 30 QFC C21 C20 SING N N 31 QFC C21 C18 DOUB Y N 32 QFC C31 N4 TRIP N N 33 QFC C20 N2 SING N N 34 QFC C17 C18 SING Y N 35 QFC C18 C19 SING N N 36 QFC N2 C19 SING N N 37 QFC N2 C22 SING N N 38 QFC C19 O1 DOUB N N 39 QFC C23 C22 SING N N 40 QFC C23 C24 SING N N 41 QFC O3 C26 DOUB N N 42 QFC C22 C26 SING N N 43 QFC C26 N3 SING N N 44 QFC N3 C25 SING N N 45 QFC C24 C25 SING N N 46 QFC C25 O2 DOUB N N 47 QFC N3 H2 SING N N 48 QFC C4 H3 SING N N 49 QFC C6 H4 SING N N 50 QFC C6 H5 SING N N 51 QFC C7 H6 SING N N 52 QFC C7 H7 SING N N 53 QFC C8 H8 SING N N 54 QFC C8 H9 SING N N 55 QFC C10 H10 SING N N 56 QFC C13 H11 SING N N 57 QFC C13 H12 SING N N 58 QFC C15 H13 SING N N 59 QFC C17 H14 SING N N 60 QFC C20 H15 SING N N 61 QFC C20 H16 SING N N 62 QFC C22 H17 SING N N 63 QFC C24 H18 SING N N 64 QFC C24 H19 SING N N 65 QFC C28 H20 SING N N 66 QFC C1 H21 SING N N 67 QFC C11 H22 SING N N 68 QFC C16 H23 SING N N 69 QFC C23 H24 SING N N 70 QFC C23 H25 SING N N 71 QFC C27 H26 SING N N 72 QFC C29 H27 SING N N 73 QFC C29 H28 SING N N 74 QFC C3 H29 SING N N 75 QFC C30 H30 SING N N 76 QFC C30 H31 SING N N 77 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor QFC SMILES ACDLabs 12.01 "O=C1NC(=O)CCC1N1Cc2c(cccc2OCc2ccc(cc2)CN2CCN(CC2)c2ccc(C#N)cc2F)C1=O" QFC InChI InChI 1.03 "InChI=1S/C32H30FN5O4/c33-26-16-23(17-34)8-9-27(26)37-14-12-36(13-15-37)18-21-4-6-22(7-5-21)20-42-29-3-1-2-24-25(29)19-38(32(24)41)28-10-11-30(39)35-31(28)40/h1-9,16,28H,10-15,18-20H2,(H,35,39,40)/t28-/m0/s1" QFC InChIKey InChI 1.03 YTINZZFBHWSAGL-NDEPHWFRSA-N QFC SMILES_CANONICAL CACTVS 3.385 "Fc1cc(ccc1N2CCN(CC2)Cc3ccc(COc4cccc5C(=O)N(Cc45)[C@H]6CCC(=O)NC6=O)cc3)C#N" QFC SMILES CACTVS 3.385 "Fc1cc(ccc1N2CCN(CC2)Cc3ccc(COc4cccc5C(=O)N(Cc45)[CH]6CCC(=O)NC6=O)cc3)C#N" QFC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(c(c1)OCc3ccc(cc3)CN4CCN(CC4)c5ccc(cc5F)C#N)CN(C2=O)[C@H]6CCC(=O)NC6=O" QFC SMILES "OpenEye OEToolkits" 2.0.7 "c1cc2c(c(c1)OCc3ccc(cc3)CN4CCN(CC4)c5ccc(cc5F)C#N)CN(C2=O)C6CCC(=O)NC6=O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier QFC "SYSTEMATIC NAME" ACDLabs 12.01 "4-[4-({4-[({2-[(3S)-2,6-dioxopiperidin-3-yl]-1-oxo-2,3-dihydro-1H-isoindol-4-yl}oxy)methyl]phenyl}methyl)piperazin-1-yl]-3-fluorobenzonitrile" QFC "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-[4-[[4-[[2-[(3~{S})-2,6-bis(oxidanylidene)piperidin-3-yl]-1-oxidanylidene-3~{H}-isoindol-4-yl]oxymethyl]phenyl]methyl]piperazin-1-yl]-3-fluoranyl-benzenecarbonitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site QFC "Create component" 2022-06-08 RCSB QFC "Initial release" 2022-07-20 RCSB #