data_R29 # _chem_comp.id R29 _chem_comp.name "1-[7,7-bis(oxidanyl)-8-oxa-7-boranuidabicyclo[4.3.0]nona-1,3,5-trien-4-yl]-3-(phenylmethyl)urea" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H16 B N2 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge -1 _chem_comp.pdbx_initial_date 2019-06-03 _chem_comp.pdbx_modified_date 2019-10-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 299.110 _chem_comp.one_letter_code ? _chem_comp.three_letter_code R29 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6RVK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal R29 C1 C1 C 0 1 Y N N -5.075 2.294 15.967 -3.257 -0.062 0.108 C1 R29 1 R29 C2 C2 C 0 1 Y N N -3.891 2.820 15.396 -1.887 -0.009 0.220 C2 R29 2 R29 C3 C3 C 0 1 Y N N -3.853 4.114 14.832 -1.249 1.223 0.297 C3 R29 3 R29 C4 C4 C 0 1 Y N N -5.006 4.897 14.829 -1.995 2.394 0.261 C4 R29 4 R29 C5 C5 C 0 1 Y N N -6.169 4.411 15.385 -3.372 2.333 0.149 C5 R29 5 R29 C6 C6 C 0 1 Y N N -6.197 3.139 15.948 -4.002 1.110 0.068 C6 R29 6 R29 C7 C7 C 0 1 N N N -7.330 2.440 16.607 -5.447 0.691 -0.054 C7 R29 7 R29 C8 C8 C 0 1 N N N -2.563 5.852 13.563 0.912 0.352 -0.188 C8 R29 8 R29 C9 C9 C 0 1 N N N -1.007 7.330 12.359 3.079 -0.666 -0.642 C9 R29 9 R29 C10 C10 C 0 1 Y N N -1.144 8.672 13.044 4.521 -0.451 -0.260 C10 R29 10 R29 C11 C11 C 0 1 Y N N -1.908 9.682 12.468 5.322 0.375 -1.025 C11 R29 11 R29 C12 C12 C 0 1 Y N N -2.029 10.924 13.078 6.645 0.572 -0.675 C12 R29 12 R29 C13 C13 C 0 1 Y N N -1.386 11.173 14.276 7.166 -0.057 0.440 C13 R29 13 R29 C14 C14 C 0 1 Y N N -0.623 10.180 14.862 6.364 -0.882 1.206 C14 R29 14 R29 C15 C15 C 0 1 Y N N -0.502 8.939 14.250 5.040 -1.076 0.858 C15 R29 15 R29 O1 O1 O 0 1 N N N -6.964 1.081 16.493 -5.440 -0.674 -0.508 O1 R29 16 R29 O3 O2 O 0 1 N N N -5.294 0.785 18.140 -4.509 -1.776 1.232 O3 R29 17 R29 O4 O3 O 0 1 N N N -3.521 6.555 13.243 0.401 -0.485 -0.906 O4 R29 18 R29 N1 N1 N 0 1 N N N -2.672 4.672 14.272 0.145 1.285 0.411 N1 R29 19 R29 N2 N2 N 0 1 N N N -1.304 6.165 13.187 2.245 0.348 0.009 N2 R29 20 R29 B1 B1 B -1 1 N N N -5.514 0.883 16.690 -4.282 -1.233 -0.001 B1 R29 21 R29 O2 O4 O 0 1 N N N -5.149 -0.406 16.065 -3.816 -2.187 -0.862 O2 R29 22 R29 H1 H1 H 0 1 N N N -2.995 2.217 15.392 -1.310 -0.922 0.248 H1 R29 23 R29 H2 H2 H 0 1 N N N -4.988 5.884 14.391 -1.500 3.352 0.321 H2 R29 24 R29 H3 H3 H 0 1 N N N -7.062 5.019 15.384 -3.953 3.243 0.122 H3 R29 25 R29 H4 H4 H 0 1 N N N -7.421 2.739 17.662 -5.939 0.759 0.917 H4 R29 26 R29 H5 H5 H 0 1 N N N -8.277 2.641 16.085 -5.960 1.324 -0.778 H5 R29 27 R29 H6 H6 H 0 1 N N N -1.693 7.318 11.499 2.973 -0.583 -1.724 H6 R29 28 R29 H7 H7 H 0 1 N N N 0.029 7.236 12.003 2.761 -1.658 -0.321 H7 R29 29 R29 H8 H8 H 0 1 N N N -2.415 9.498 11.532 4.916 0.866 -1.897 H8 R29 30 R29 H9 H9 H 0 1 N N N -2.626 11.696 12.616 7.272 1.217 -1.274 H9 R29 31 R29 H10 H10 H 0 1 N N N -1.479 12.138 14.752 8.199 0.097 0.713 H10 R29 32 R29 H11 H11 H 0 1 N N N -0.120 10.370 15.798 6.771 -1.374 2.077 H11 R29 33 R29 H12 H12 H 0 1 N N N 0.098 8.171 14.716 4.412 -1.717 1.459 H12 R29 34 R29 H13 H13 H 0 1 N N N -5.582 -0.066 18.448 -5.139 -2.510 1.229 H13 R29 35 R29 H14 H14 H 0 1 N N N -1.828 4.153 14.406 0.559 1.998 0.922 H14 R29 36 R29 H15 H15 H 0 1 N N N -0.550 5.579 13.486 2.652 1.016 0.583 H15 R29 37 R29 H16 H16 H 0 1 N N N -5.472 -1.121 16.601 -4.410 -2.942 -0.971 H16 R29 38 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal R29 C9 C10 SING N N 1 R29 C9 N2 SING N N 2 R29 C11 C10 DOUB Y N 3 R29 C11 C12 SING Y N 4 R29 C10 C15 SING Y N 5 R29 C12 C13 DOUB Y N 6 R29 N2 C8 SING N N 7 R29 O4 C8 DOUB N N 8 R29 C8 N1 SING N N 9 R29 C15 C14 DOUB Y N 10 R29 N1 C3 SING N N 11 R29 C13 C14 SING Y N 12 R29 C4 C3 DOUB Y N 13 R29 C4 C5 SING Y N 14 R29 C3 C2 SING Y N 15 R29 C5 C6 DOUB Y N 16 R29 C2 C1 DOUB Y N 17 R29 C6 C1 SING Y N 18 R29 C6 C7 SING N N 19 R29 C1 B1 SING N N 20 R29 O2 B1 SING N N 21 R29 O1 C7 SING N N 22 R29 O1 B1 SING N N 23 R29 B1 O3 SING N N 24 R29 C2 H1 SING N N 25 R29 C4 H2 SING N N 26 R29 C5 H3 SING N N 27 R29 C7 H4 SING N N 28 R29 C7 H5 SING N N 29 R29 C9 H6 SING N N 30 R29 C9 H7 SING N N 31 R29 C11 H8 SING N N 32 R29 C12 H9 SING N N 33 R29 C13 H10 SING N N 34 R29 C14 H11 SING N N 35 R29 C15 H12 SING N N 36 R29 O3 H13 SING N N 37 R29 N1 H14 SING N N 38 R29 N2 H15 SING N N 39 R29 O2 H16 SING N N 40 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor R29 InChI InChI 1.03 "InChI=1S/C15H16BN2O4/c19-15(17-9-11-4-2-1-3-5-11)18-13-7-6-12-10-22-16(20,21)14(12)8-13/h1-8,20-21H,9-10H2,(H2,17,18,19)/q-1" R29 InChIKey InChI 1.03 OZPLHZMPGOIEJW-UHFFFAOYSA-N R29 SMILES_CANONICAL CACTVS 3.385 "O[B-]1(O)OCc2ccc(NC(=O)NCc3ccccc3)cc12" R29 SMILES CACTVS 3.385 "O[B-]1(O)OCc2ccc(NC(=O)NCc3ccccc3)cc12" R29 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[B-]1(c2cc(ccc2CO1)NC(=O)NCc3ccccc3)(O)O" R29 SMILES "OpenEye OEToolkits" 2.0.7 "[B-]1(c2cc(ccc2CO1)NC(=O)NCc3ccccc3)(O)O" # _pdbx_chem_comp_identifier.comp_id R29 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1-[7,7-bis(oxidanyl)-8-oxa-7-boranuidabicyclo[4.3.0]nona-1,3,5-trien-4-yl]-3-(phenylmethyl)urea" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site R29 "Create component" 2019-06-03 PDBE R29 "Initial release" 2019-08-28 RCSB R29 "Other modification" 2019-10-18 PDBE ##