data_R39 # _chem_comp.id R39 _chem_comp.name "1-[3-tert-butyl-1-(4-methylphenyl)-1H-pyrazol-5-yl]-3-[4-(2-morpholin-4-ylethoxy)phenyl]urea" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H35 N5 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "1-(3-tert-butyl-1-p-tolyl-1H-pyrazol-5-yl)-3-(4-(2-morpholinoethoxy)phenyl)urea" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-06-17 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 477.599 _chem_comp.one_letter_code ? _chem_comp.three_letter_code R39 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3HV6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal R39 CAR CAR C 0 1 N N N -2.012 1.464 -23.827 7.905 0.275 -1.399 CAR R39 1 R39 CAO CAO C 0 1 N N N -2.500 2.923 -23.837 8.198 -1.135 -1.918 CAO R39 2 R39 OAX OAX O 0 1 N N N -1.825 3.618 -22.758 9.336 -1.663 -1.230 OAX R39 3 R39 CAP CAP C 0 1 N N N -1.995 3.032 -21.449 9.172 -1.728 0.189 CAP R39 4 R39 CAS CAS C 0 1 N N N -2.837 1.739 -21.482 8.888 -0.323 0.729 CAS R39 5 R39 NBG NBG N 0 1 N N N -2.371 0.814 -22.543 7.701 0.224 0.056 NBG R39 6 R39 CAT CAT C 0 1 N N N -3.390 -0.185 -22.844 7.360 1.551 0.586 CAT R39 7 R39 CAQ CAQ C 0 1 N N N -3.189 -1.375 -21.920 5.907 1.881 0.240 CAQ R39 8 R39 OAY OAY O 0 1 N N N -3.834 -0.969 -20.696 5.037 0.974 0.921 OAY R39 9 R39 CBC CBC C 0 1 Y N N -3.370 -1.602 -19.583 3.701 1.132 0.720 CBC R39 10 R39 CAK CAK C 0 1 Y N N -3.883 -1.184 -18.369 2.801 0.286 1.350 CAK R39 11 R39 CAI CAI C 0 1 Y N N -3.472 -1.764 -17.172 1.444 0.445 1.147 CAI R39 12 R39 CAJ CAJ C 0 1 Y N N -2.436 -2.634 -19.609 3.240 2.141 -0.112 CAJ R39 13 R39 CAH CAH C 0 1 Y N N -2.043 -3.213 -18.401 1.883 2.302 -0.316 CAH R39 14 R39 CBB CBB C 0 1 Y N N -2.556 -2.784 -17.176 0.982 1.452 0.310 CBB R39 15 R39 NAV NAV N 0 1 N N N -2.142 -3.390 -16.033 -0.394 1.613 0.102 NAV R39 16 R39 CAZ CAZ C 0 1 N N N -0.930 -3.236 -15.531 -1.207 0.538 0.104 CAZ R39 17 R39 OAE OAE O 0 1 N N N -0.132 -2.443 -16.043 -0.736 -0.580 0.190 OAE R39 18 R39 NAW NAW N 0 1 N N N -0.637 -3.928 -14.411 -2.542 0.702 0.009 NAW R39 19 R39 CBE CBE C 0 1 Y N N 0.538 -3.875 -13.750 -3.382 -0.411 0.010 CBE R39 20 R39 CAN CAN C 0 1 Y N N 1.386 -2.817 -13.595 -2.995 -1.713 0.101 CAN R39 21 R39 CBF CBF C 0 1 Y N N 2.373 -3.291 -12.813 -4.146 -2.506 0.066 CBF R39 22 R39 CBI CBI C 0 1 N N N 3.633 -2.557 -12.312 -4.181 -4.010 0.140 CBI R39 23 R39 CAC CAC C 0 1 N N N 4.638 -3.508 -11.649 -3.911 -4.457 1.579 CAC R39 24 R39 CAD CAD C 0 1 N N N 4.345 -1.888 -13.473 -5.558 -4.511 -0.299 CAD R39 25 R39 CAB CAB C 0 1 N N N 3.207 -1.519 -11.245 -3.109 -4.592 -0.784 CAB R39 26 R39 NAU NAU N 0 1 Y N N 2.116 -4.574 -12.511 -5.188 -1.721 -0.041 NAU R39 27 R39 NBH NBH N 0 1 Y N N 1.039 -4.903 -13.054 -4.741 -0.394 -0.073 NBH R39 28 R39 CBD CBD C 0 1 Y N N 0.497 -6.146 -12.934 -5.548 0.748 -0.176 CBD R39 29 R39 CAL CAL C 0 1 Y N N 0.022 -6.836 -14.053 -5.184 1.917 0.478 CAL R39 30 R39 CAF CAF C 0 1 Y N N -0.506 -8.138 -13.915 -5.982 3.040 0.375 CAF R39 31 R39 CBA CBA C 0 1 Y N N -0.556 -8.722 -12.641 -7.141 3.000 -0.378 CBA R39 32 R39 CAA CAA C 0 1 N N N -1.124 -10.137 -12.478 -8.009 4.227 -0.488 CAA R39 33 R39 CAG CAG C 0 1 Y N N -0.072 -8.051 -11.506 -7.505 1.837 -1.030 CAG R39 34 R39 CAM CAM C 0 1 Y N N 0.460 -6.757 -11.653 -6.709 0.712 -0.936 CAM R39 35 R39 HAR HAR H 0 1 N N N -2.486 0.917 -24.655 8.747 0.929 -1.626 HAR R39 36 R39 HARA HARA H 0 0 N N N -0.918 1.450 -23.944 7.005 0.660 -1.880 HARA R39 37 R39 HAO HAO H 0 1 N N N -2.259 3.396 -24.801 7.335 -1.776 -1.739 HAO R39 38 R39 HAOA HAOA H 0 0 N N N -3.591 2.966 -23.701 8.406 -1.094 -2.987 HAOA R39 39 R39 HAP HAP H 0 1 N N N -1.001 2.790 -21.045 8.336 -2.386 0.429 HAP R39 40 R39 HAPA HAPA H 0 0 N N N -2.527 3.762 -20.822 10.083 -2.116 0.643 HAPA R39 41 R39 HAS HAS H 0 1 N N N -2.750 1.234 -20.508 8.705 -0.376 1.802 HAS R39 42 R39 HASA HASA H 0 0 N N N -3.881 2.011 -21.694 9.746 0.321 0.537 HASA R39 43 R39 HAT HAT H 0 1 N N N -4.390 0.244 -22.686 7.484 1.552 1.669 HAT R39 44 R39 HATA HATA H 0 0 N N N -3.304 -0.505 -23.893 8.018 2.299 0.144 HATA R39 45 R39 HAQ HAQ H 0 1 N N N -3.646 -2.286 -22.333 5.682 2.901 0.549 HAQ R39 46 R39 HAQA HAQA H 0 0 N N N -2.128 -1.627 -21.777 5.760 1.786 -0.836 HAQA R39 47 R39 HAK HAK H 0 1 N N N -4.617 -0.392 -18.349 3.161 -0.498 2.001 HAK R39 48 R39 HAI HAI H 0 1 N N N -3.877 -1.409 -16.236 0.744 -0.214 1.638 HAI R39 49 R39 HAJ HAJ H 0 1 N N N -2.024 -2.980 -20.545 3.941 2.803 -0.599 HAJ R39 50 R39 HAH HAH H 0 1 N N N -1.321 -4.016 -18.415 1.524 3.088 -0.964 HAH R39 51 R39 HNAV HNAV H 0 0 N N N -2.786 -3.981 -15.548 -0.762 2.499 -0.042 HNAV R39 52 R39 HNAW HNAW H 0 0 N N N -1.347 -4.528 -14.041 -2.917 1.594 -0.060 HNAW R39 53 R39 HAN HAN H 0 1 N N N 1.287 -1.824 -14.007 -1.980 -2.070 0.185 HAN R39 54 R39 HAC HAC H 0 1 N N N 5.450 -3.736 -12.356 -4.675 -4.043 2.237 HAC R39 55 R39 HACA HACA H 0 0 N N N 5.057 -3.030 -10.751 -3.936 -5.545 1.632 HACA R39 56 R39 HACB HACB H 0 0 N N N 4.128 -4.440 -11.365 -2.930 -4.100 1.892 HACB R39 57 R39 HAD HAD H 0 1 N N N 3.633 -1.726 -14.296 -5.751 -4.193 -1.324 HAD R39 58 R39 HADA HADA H 0 0 N N N 4.752 -0.920 -13.145 -5.584 -5.599 -0.246 HADA R39 59 R39 HADB HADB H 0 0 N N N 5.166 -2.533 -13.820 -6.322 -4.097 0.359 HADB R39 60 R39 HAB HAB H 0 1 N N N 3.106 -2.016 -10.269 -2.127 -4.235 -0.471 HAB R39 61 R39 HABA HABA H 0 0 N N N 3.970 -0.729 -11.177 -3.134 -5.680 -0.730 HABA R39 62 R39 HABB HABB H 0 0 N N N 2.243 -1.074 -11.531 -3.301 -4.274 -1.808 HABB R39 63 R39 HAL HAL H 0 1 N N N 0.059 -6.371 -15.027 -4.280 1.949 1.066 HAL R39 64 R39 HAF HAF H 0 1 N N N -0.866 -8.677 -14.779 -5.700 3.951 0.883 HAF R39 65 R39 HAA HAA H 0 1 N N N -1.260 -10.594 -13.469 -7.690 4.822 -1.344 HAA R39 66 R39 HAAA HAAA H 0 0 N N N -0.425 -10.746 -11.886 -9.048 3.927 -0.622 HAAA R39 67 R39 HAAB HAAB H 0 0 N N N -2.094 -10.085 -11.962 -7.916 4.821 0.421 HAAB R39 68 R39 HAG HAG H 0 1 N N N -0.108 -8.522 -10.535 -8.411 1.808 -1.617 HAG R39 69 R39 HAM HAM H 0 1 N N N 0.840 -6.228 -10.791 -6.991 -0.195 -1.449 HAM R39 70 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal R39 CAO CAR SING N N 1 R39 CAR NBG SING N N 2 R39 CAR HAR SING N N 3 R39 CAR HARA SING N N 4 R39 CAO OAX SING N N 5 R39 CAO HAO SING N N 6 R39 CAO HAOA SING N N 7 R39 OAX CAP SING N N 8 R39 CAS CAP SING N N 9 R39 CAP HAP SING N N 10 R39 CAP HAPA SING N N 11 R39 NBG CAS SING N N 12 R39 CAS HAS SING N N 13 R39 CAS HASA SING N N 14 R39 CAT NBG SING N N 15 R39 CAT CAQ SING N N 16 R39 CAT HAT SING N N 17 R39 CAT HATA SING N N 18 R39 CAQ OAY SING N N 19 R39 CAQ HAQ SING N N 20 R39 CAQ HAQA SING N N 21 R39 OAY CBC SING N N 22 R39 CAJ CBC DOUB Y N 23 R39 CBC CAK SING Y N 24 R39 CAK CAI DOUB Y N 25 R39 CAK HAK SING N N 26 R39 CBB CAI SING Y N 27 R39 CAI HAI SING N N 28 R39 CAJ CAH SING Y N 29 R39 CAJ HAJ SING N N 30 R39 CAH CBB DOUB Y N 31 R39 CAH HAH SING N N 32 R39 CBB NAV SING N N 33 R39 NAV CAZ SING N N 34 R39 NAV HNAV SING N N 35 R39 OAE CAZ DOUB N N 36 R39 CAZ NAW SING N N 37 R39 NAW CBE SING N N 38 R39 NAW HNAW SING N N 39 R39 CBE CAN DOUB Y N 40 R39 CBE NBH SING Y N 41 R39 CAN CBF SING Y N 42 R39 CAN HAN SING N N 43 R39 CBF NAU DOUB Y N 44 R39 CBF CBI SING N N 45 R39 CAD CBI SING N N 46 R39 CBI CAC SING N N 47 R39 CBI CAB SING N N 48 R39 CAC HAC SING N N 49 R39 CAC HACA SING N N 50 R39 CAC HACB SING N N 51 R39 CAD HAD SING N N 52 R39 CAD HADA SING N N 53 R39 CAD HADB SING N N 54 R39 CAB HAB SING N N 55 R39 CAB HABA SING N N 56 R39 CAB HABB SING N N 57 R39 NBH NAU SING Y N 58 R39 NBH CBD SING Y N 59 R39 CAL CBD DOUB Y N 60 R39 CBD CAM SING Y N 61 R39 CAL CAF SING Y N 62 R39 CAL HAL SING N N 63 R39 CAF CBA DOUB Y N 64 R39 CAF HAF SING N N 65 R39 CBA CAA SING N N 66 R39 CBA CAG SING Y N 67 R39 CAA HAA SING N N 68 R39 CAA HAAA SING N N 69 R39 CAA HAAB SING N N 70 R39 CAM CAG DOUB Y N 71 R39 CAG HAG SING N N 72 R39 CAM HAM SING N N 73 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor R39 SMILES ACDLabs 10.04 "O=C(Nc2cc(nn2c1ccc(cc1)C)C(C)(C)C)Nc4ccc(OCCN3CCOCC3)cc4" R39 SMILES_CANONICAL CACTVS 3.341 "Cc1ccc(cc1)n2nc(cc2NC(=O)Nc3ccc(OCCN4CCOCC4)cc3)C(C)(C)C" R39 SMILES CACTVS 3.341 "Cc1ccc(cc1)n2nc(cc2NC(=O)Nc3ccc(OCCN4CCOCC4)cc3)C(C)(C)C" R39 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "Cc1ccc(cc1)n2c(cc(n2)C(C)(C)C)NC(=O)Nc3ccc(cc3)OCCN4CCOCC4" R39 SMILES "OpenEye OEToolkits" 1.5.0 "Cc1ccc(cc1)n2c(cc(n2)C(C)(C)C)NC(=O)Nc3ccc(cc3)OCCN4CCOCC4" R39 InChI InChI 1.03 "InChI=1S/C27H35N5O3/c1-20-5-9-22(10-6-20)32-25(19-24(30-32)27(2,3)4)29-26(33)28-21-7-11-23(12-8-21)35-18-15-31-13-16-34-17-14-31/h5-12,19H,13-18H2,1-4H3,(H2,28,29,33)" R39 InChIKey InChI 1.03 FRZNJFWQVYAVCE-UHFFFAOYSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier R39 "SYSTEMATIC NAME" ACDLabs 10.04 "1-[3-tert-butyl-1-(4-methylphenyl)-1H-pyrazol-5-yl]-3-[4-(2-morpholin-4-ylethoxy)phenyl]urea" R39 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "3-[5-tert-butyl-2-(4-methylphenyl)pyrazol-3-yl]-1-[4-(2-morpholin-4-ylethoxy)phenyl]urea" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site R39 "Create component" 2009-06-17 RCSB R39 "Modify aromatic_flag" 2011-06-04 RCSB R39 "Modify descriptor" 2011-06-04 RCSB R39 "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id R39 _pdbx_chem_comp_synonyms.name "1-(3-tert-butyl-1-p-tolyl-1H-pyrazol-5-yl)-3-(4-(2-morpholinoethoxy)phenyl)urea" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##