data_RAR # _chem_comp.id RAR _chem_comp.name "5-(3,4-dimethoxy-5-{(1E)-3-oxo-3-[(1S)-1-propylphthalazin-2(1H)-yl]prop-1-en-1-yl}benzyl)pyrimidine-2,4-diamine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H30 N6 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(S)-3-(5-((2,4-diaminopyrimidin-5-yl)methyl)-2,3-dimethoxyphenyl)-1-(1-propylphthalazin-2(1H)-yl)prop-2-en-1-one" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2008-12-19 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 486.566 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RAR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RAR N01 N01 N 0 1 N N N 11.943 -2.931 5.707 -1.663 2.464 -1.006 N01 RAR 1 RAR C02 C02 C 0 1 Y N N 12.357 -2.420 4.496 -2.978 2.689 -0.631 C02 RAR 2 RAR C03 C03 C 0 1 Y N N 12.645 -3.379 3.399 -3.988 1.809 -1.028 C03 RAR 3 RAR C04 C04 C 0 1 N N N 12.490 -4.852 3.719 -3.670 0.600 -1.868 C04 RAR 4 RAR C05 C05 C 0 1 Y N N 13.182 -5.753 2.741 -3.241 -0.535 -0.974 C05 RAR 5 RAR C06 C06 C 0 1 Y N N 12.317 -6.783 2.006 -4.188 -1.416 -0.476 C06 RAR 6 RAR C07 C07 C 0 1 Y N N 12.975 -7.683 1.008 -3.806 -2.463 0.347 C07 RAR 7 RAR O08 O08 O 0 1 N N N 12.126 -8.579 0.424 -4.742 -3.322 0.831 O08 RAR 8 RAR C09 C09 C 0 1 N N N 10.965 -8.757 1.129 -6.099 -3.085 0.451 C09 RAR 9 RAR C10 C10 C 0 1 Y N N 14.482 -7.568 0.744 -2.467 -2.635 0.677 C10 RAR 10 RAR O11 O11 O 0 1 N N N 15.016 -8.411 -0.176 -2.089 -3.661 1.483 O11 RAR 11 RAR C12 C12 C 0 1 N N N 14.491 -8.336 -1.496 -1.753 -4.896 0.846 C12 RAR 12 RAR C13 C13 C 0 1 Y N N 15.370 -6.547 1.486 -1.508 -1.745 0.173 C13 RAR 13 RAR C14 C14 C 0 1 N N N 16.874 -6.359 1.284 -0.089 -1.916 0.514 C14 RAR 14 RAR C15 C15 C 0 1 N N N 17.574 -6.915 0.339 0.832 -1.056 0.027 C15 RAR 15 RAR C16 C16 C 0 1 N N N 19.046 -6.599 0.142 2.243 -1.226 0.366 C16 RAR 16 RAR N17 N17 N 0 1 N N N 19.714 -5.605 0.916 3.161 -0.368 -0.120 N17 RAR 17 RAR N18 N18 N 0 1 N N N 18.885 -4.868 1.820 2.767 0.690 -0.952 N18 RAR 18 RAR C19 C19 C 0 1 N N N 19.423 -4.219 2.951 3.421 1.812 -0.930 C19 RAR 19 RAR C20 C20 C 0 1 N N S 21.150 -5.282 0.785 4.580 -0.532 0.223 C20 RAR 20 RAR C21 C21 C 0 1 N N N 21.463 -3.913 0.052 5.326 -1.154 -0.959 C21 RAR 21 RAR C22 C22 C 0 1 N N N 22.613 -4.180 -0.879 4.804 -2.571 -1.203 C22 RAR 22 RAR C23 C23 C 0 1 N N N 21.993 -4.719 -2.152 5.549 -3.193 -2.385 C23 RAR 23 RAR C24 C24 C 0 1 Y N N 21.767 -4.872 2.175 5.161 0.826 0.531 C24 RAR 24 RAR C25 C25 C 0 1 Y N N 20.879 -4.351 3.220 4.594 1.957 -0.050 C25 RAR 25 RAR C26 C26 C 0 1 Y N N 21.453 -3.932 4.583 5.138 3.214 0.213 C26 RAR 26 RAR C27 C27 C 0 1 Y N N 22.938 -4.082 4.783 6.228 3.325 1.052 C27 RAR 27 RAR C28 C28 C 0 1 Y N N 23.827 -4.610 3.712 6.781 2.196 1.630 C28 RAR 28 RAR C29 C29 C 0 1 Y N N 23.280 -5.021 2.382 6.243 0.954 1.373 C29 RAR 29 RAR O30 O30 O 0 1 N N N 19.621 -7.121 -0.707 2.589 -2.144 1.089 O30 RAR 30 RAR C31 C31 C 0 1 Y N N 14.687 -5.640 2.490 -1.909 -0.694 -0.661 C31 RAR 31 RAR C32 C32 C 0 1 Y N N 13.068 -2.841 2.097 -5.284 2.073 -0.631 C32 RAR 32 RAR N33 N33 N 0 1 Y N N 13.201 -1.446 1.940 -5.531 3.145 0.108 N33 RAR 33 RAR C34 C34 C 0 1 Y N N 12.929 -0.479 3.041 -4.553 3.962 0.470 C34 RAR 34 RAR N35 N35 N 0 1 N N N 13.095 0.903 2.858 -4.851 5.071 1.243 N35 RAR 35 RAR N36 N36 N 0 1 Y N N 12.510 -1.015 4.319 -3.296 3.742 0.115 N36 RAR 36 RAR HN01 HN01 H 0 0 N N N 11.843 -3.923 5.634 -1.439 1.691 -1.547 HN01 RAR 37 RAR HN0A HN0A H 0 0 N N N 12.622 -2.716 6.409 -0.968 3.081 -0.730 HN0A RAR 38 RAR H04 H04 H 0 1 N N N 12.920 -5.033 4.715 -4.557 0.305 -2.430 H04 RAR 39 RAR H04A H04A H 0 0 N N N 11.416 -5.084 3.672 -2.865 0.840 -2.562 H04A RAR 40 RAR H06 H06 H 0 1 N N N 11.258 -6.857 2.204 -5.229 -1.285 -0.731 H06 RAR 41 RAR H09 H09 H 0 1 N N N 11.192 -8.805 2.204 -6.405 -2.096 0.793 H09 RAR 42 RAR H09A H09A H 0 0 N N N 10.285 -7.914 0.935 -6.187 -3.138 -0.634 H09A RAR 43 RAR H09B H09B H 0 0 N N N 10.485 -9.695 0.814 -6.741 -3.841 0.905 H09B RAR 44 RAR H12 H12 H 0 1 N N N 13.392 -8.317 -1.454 -2.614 -5.263 0.289 H12 RAR 45 RAR H12A H12A H 0 0 N N N 14.855 -7.420 -1.984 -0.918 -4.737 0.163 H12A RAR 46 RAR H12B H12B H 0 0 N N N 14.820 -9.214 -2.072 -1.470 -5.628 1.602 H12B RAR 47 RAR H14 H14 H 0 1 N N N 17.394 -5.716 1.978 0.218 -2.729 1.155 H14 RAR 48 RAR H15 H15 H 0 1 N N N 17.095 -7.621 -0.324 0.525 -0.243 -0.614 H15 RAR 49 RAR H19 H19 H 0 1 N N N 18.791 -3.639 3.607 3.106 2.636 -1.553 H19 RAR 50 RAR H20 H20 H 0 1 N N N 21.530 -6.182 0.280 4.673 -1.176 1.097 H20 RAR 51 RAR H21 H21 H 0 1 N N N 20.584 -3.569 -0.512 5.163 -0.548 -1.851 H21 RAR 52 RAR H21A H21A H 0 0 N N N 21.714 -3.124 0.776 6.392 -1.193 -0.736 H21A RAR 53 RAR H22 H22 H 0 1 N N N 23.174 -3.256 -1.080 4.967 -3.177 -0.311 H22 RAR 54 RAR H22A H22A H 0 0 N N N 23.328 -4.894 -0.444 3.737 -2.533 -1.426 H22A RAR 55 RAR H23 H23 H 0 1 N N N 20.911 -4.850 -2.006 5.178 -4.203 -2.559 H23 RAR 56 RAR H23A H23A H 0 0 N N N 22.169 -4.010 -2.974 5.386 -2.588 -3.277 H23A RAR 57 RAR H23B H23B H 0 0 N N N 22.449 -5.689 -2.400 6.616 -3.232 -2.162 H23B RAR 58 RAR H26 H26 H 0 1 N N N 20.817 -3.546 5.366 4.707 4.097 -0.237 H26 RAR 59 RAR H27 H27 H 0 1 N N N 23.371 -3.798 5.731 6.652 4.297 1.258 H27 RAR 60 RAR H28 H28 H 0 1 N N N 24.887 -4.698 3.899 7.630 2.292 2.290 H28 RAR 61 RAR H29 H29 H 0 1 N N N 23.921 -5.405 1.602 6.679 0.079 1.831 H29 RAR 62 RAR H31 H31 H 0 1 N N N 15.267 -4.908 3.032 -1.176 -0.005 -1.053 H31 RAR 63 RAR H32 H32 H 0 1 N N N 13.274 -3.506 1.272 -6.089 1.413 -0.921 H32 RAR 64 RAR HN35 HN35 H 0 0 N N N 13.134 1.355 3.749 -5.767 5.242 1.513 HN35 RAR 65 RAR HN3A HN3A H 0 0 N N N 13.945 1.073 2.360 -4.144 5.677 1.514 HN3A RAR 66 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RAR C02 N01 SING N N 1 RAR N01 HN01 SING N N 2 RAR N01 HN0A SING N N 3 RAR C03 C02 DOUB Y N 4 RAR N36 C02 SING Y N 5 RAR C32 C03 SING Y N 6 RAR C03 C04 SING N N 7 RAR C05 C04 SING N N 8 RAR C04 H04 SING N N 9 RAR C04 H04A SING N N 10 RAR C06 C05 DOUB Y N 11 RAR C31 C05 SING Y N 12 RAR C07 C06 SING Y N 13 RAR C06 H06 SING N N 14 RAR O08 C07 SING N N 15 RAR C10 C07 DOUB Y N 16 RAR O08 C09 SING N N 17 RAR C09 H09 SING N N 18 RAR C09 H09A SING N N 19 RAR C09 H09B SING N N 20 RAR O11 C10 SING N N 21 RAR C10 C13 SING Y N 22 RAR C12 O11 SING N N 23 RAR C12 H12 SING N N 24 RAR C12 H12A SING N N 25 RAR C12 H12B SING N N 26 RAR C14 C13 SING N E 27 RAR C13 C31 DOUB Y N 28 RAR C15 C14 DOUB N N 29 RAR C14 H14 SING N N 30 RAR C16 C15 SING N N 31 RAR C15 H15 SING N N 32 RAR O30 C16 DOUB N N 33 RAR C16 N17 SING N N 34 RAR C20 N17 SING N N 35 RAR N17 N18 SING N N 36 RAR N18 C19 DOUB N N 37 RAR C19 C25 SING N N 38 RAR C19 H19 SING N N 39 RAR C21 C20 SING N N 40 RAR C20 C24 SING N N 41 RAR C20 H20 SING N N 42 RAR C22 C21 SING N N 43 RAR C21 H21 SING N N 44 RAR C21 H21A SING N N 45 RAR C23 C22 SING N N 46 RAR C22 H22 SING N N 47 RAR C22 H22A SING N N 48 RAR C23 H23 SING N N 49 RAR C23 H23A SING N N 50 RAR C23 H23B SING N N 51 RAR C24 C29 DOUB Y N 52 RAR C24 C25 SING Y N 53 RAR C25 C26 DOUB Y N 54 RAR C26 C27 SING Y N 55 RAR C26 H26 SING N N 56 RAR C28 C27 DOUB Y N 57 RAR C27 H27 SING N N 58 RAR C29 C28 SING Y N 59 RAR C28 H28 SING N N 60 RAR C29 H29 SING N N 61 RAR C31 H31 SING N N 62 RAR N33 C32 DOUB Y N 63 RAR C32 H32 SING N N 64 RAR N33 C34 SING Y N 65 RAR N35 C34 SING N N 66 RAR C34 N36 DOUB Y N 67 RAR N35 HN35 SING N N 68 RAR N35 HN3A SING N N 69 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RAR SMILES ACDLabs 10.04 "O=C(N2N=Cc1c(cccc1)C2CCC)\C=C\c3cc(cc(OC)c3OC)Cc4cnc(nc4N)N" RAR SMILES_CANONICAL CACTVS 3.341 "CCC[C@@H]1N(N=Cc2ccccc12)C(=O)\C=C\c3cc(Cc4cnc(N)nc4N)cc(OC)c3OC" RAR SMILES CACTVS 3.341 "CCC[CH]1N(N=Cc2ccccc12)C(=O)C=Cc3cc(Cc4cnc(N)nc4N)cc(OC)c3OC" RAR SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CCC[C@H]1c2ccccc2C=NN1C(=O)\C=C\c3cc(cc(c3OC)OC)Cc4cnc(nc4N)N" RAR SMILES "OpenEye OEToolkits" 1.5.0 "CCCC1c2ccccc2C=NN1C(=O)C=Cc3cc(cc(c3OC)OC)Cc4cnc(nc4N)N" RAR InChI InChI 1.03 "InChI=1S/C27H30N6O3/c1-4-7-22-21-9-6-5-8-19(21)16-31-33(22)24(34)11-10-18-12-17(14-23(35-2)25(18)36-3)13-20-15-30-27(29)32-26(20)28/h5-6,8-12,14-16,22H,4,7,13H2,1-3H3,(H4,28,29,30,32)/b11-10+/t22-/m0/s1" RAR InChIKey InChI 1.03 YGDVMSPWZQHNMB-NEQMZLFVSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier RAR "SYSTEMATIC NAME" ACDLabs 10.04 "5-(3,4-dimethoxy-5-{(1E)-3-oxo-3-[(1S)-1-propylphthalazin-2(1H)-yl]prop-1-en-1-yl}benzyl)pyrimidine-2,4-diamine" RAR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(E)-3-[5-[(2,4-diaminopyrimidin-5-yl)methyl]-2,3-dimethoxy-phenyl]-1-[(1S)-1-propyl-1H-phthalazin-2-yl]prop-2-en-1-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RAR "Create component" 2008-12-19 RCSB RAR "Modify aromatic_flag" 2011-06-04 RCSB RAR "Modify descriptor" 2011-06-04 RCSB RAR "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id RAR _pdbx_chem_comp_synonyms.name "(S)-3-(5-((2,4-diaminopyrimidin-5-yl)methyl)-2,3-dimethoxyphenyl)-1-(1-propylphthalazin-2(1H)-yl)prop-2-en-1-one" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##