data_RIT # _chem_comp.id RIT _chem_comp.name RITONAVIR _chem_comp.type peptide-like _chem_comp.pdbx_type HETAIN _chem_comp.formula "C37 H48 N6 O5 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms A-84538 _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 720.944 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RIT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1HXW _chem_comp.pdbx_subcomponent_list "013 015 VAL 019" _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RIT C1 C1 C 0 1 Y N N 16.662 17.790 1.494 8.214 3.157 1.608 C1 013 1 RIT C2 C2 C 0 1 Y N N 16.229 17.935 2.784 7.655 2.966 0.409 C2 013 2 RIT S3 S3 S 0 1 Y N N 17.345 17.324 4.036 7.345 4.548 -0.303 S3 013 3 RIT C4 C4 C 0 1 Y N N 18.316 17.113 2.555 7.998 5.308 1.082 C4 013 4 RIT N5 N5 N 0 1 Y N N 17.867 17.366 1.377 8.383 4.422 1.936 N5 013 5 RIT C6 C6 C 0 1 N N N 15.073 18.417 3.489 7.344 1.633 -0.222 C6 013 6 RIT O7 O7 O 0 1 N N N 15.186 19.813 3.708 6.003 1.222 0.152 O7 013 7 RIT C10 C10 C 0 1 N N N 14.216 20.602 4.339 5.567 0.043 -0.333 C10 013 8 RIT O24 O24 O 0 1 N N N 13.103 20.170 4.660 6.289 -0.623 -1.049 O24 013 9 RIT N11 N11 N 0 1 N N N 14.650 21.872 4.525 4.332 -0.397 -0.024 N11 015 10 RIT C12 C12 C 0 1 N N S 13.873 22.912 5.228 3.858 -1.679 -0.552 C12 015 11 RIT C13 C13 C 0 1 N N S 13.503 24.140 4.392 2.329 -1.674 -0.608 C13 015 12 RIT C14 C14 C 0 1 N N N 12.672 23.806 3.171 1.857 -0.541 -1.521 C14 015 13 RIT C15 C15 C 0 1 N N S 11.140 23.572 3.315 0.347 -0.658 -1.740 C15 015 14 RIT C26 C26 C 0 1 N N N 14.261 23.243 6.671 4.331 -2.812 0.362 C26 015 15 RIT C28 C28 C 0 1 Y N N 14.816 22.225 7.534 5.835 -2.896 0.321 C28 015 16 RIT C31 C31 C 0 1 Y N N 13.799 21.708 8.344 6.592 -2.167 1.220 C31 015 17 RIT C32 C32 C 0 1 Y N N 14.098 20.603 9.157 7.971 -2.243 1.183 C32 015 18 RIT C33 C33 C 0 1 Y N N 15.374 20.013 9.171 8.594 -3.049 0.248 C33 015 19 RIT C34 C34 C 0 1 Y N N 16.392 20.566 8.364 7.837 -3.778 -0.650 C34 015 20 RIT C35 C35 C 0 1 Y N N 16.115 21.668 7.549 6.457 -3.705 -0.610 C35 015 21 RIT O41 O41 O 0 1 N N N 14.754 24.664 3.978 1.804 -1.477 0.706 O41 015 22 RIT C44 C44 C 0 1 N N N 10.569 23.586 1.929 -0.095 0.353 -2.799 C44 015 23 RIT C45 C45 C 0 1 Y N N 9.254 22.978 2.001 -1.558 0.156 -3.103 C45 015 24 RIT C48 C48 C 0 1 Y N N 8.149 23.845 2.018 -2.514 0.845 -2.379 C48 015 25 RIT C49 C49 C 0 1 Y N N 6.836 23.335 2.041 -3.855 0.663 -2.658 C49 015 26 RIT C50 C50 C 0 1 Y N N 6.660 21.949 2.026 -4.242 -0.207 -3.661 C50 015 27 RIT C51 C51 C 0 1 Y N N 7.756 21.090 2.003 -3.286 -0.895 -4.385 C51 015 28 RIT C52 C52 C 0 1 Y N N 9.059 21.593 1.992 -1.944 -0.711 -4.109 C52 015 29 RIT N58 N58 N 0 1 N N N 10.469 24.554 4.137 -0.351 -0.383 -0.481 N58 015 30 RIT N20 N20 N 0 1 N N N 7.906 25.680 5.503 -3.501 -1.468 1.075 N VAL 31 RIT C19 C19 C 0 1 N N S 9.274 25.515 5.996 -2.222 -0.754 1.094 CA VAL 32 RIT C18 C18 C 0 1 N N N 9.960 24.298 5.348 -1.423 -1.120 -0.130 C VAL 33 RIT O61 O61 O 0 1 N N N 9.968 23.159 5.858 -1.746 -2.079 -0.800 O VAL 34 RIT C62 C62 C 0 1 N N N 9.255 25.567 7.557 -1.439 -1.143 2.349 CB VAL 35 RIT C64 C64 C 0 1 N N N 10.596 25.275 8.282 -1.020 -2.611 2.254 CG1 VAL 36 RIT C68 C68 C 0 1 N N N 8.565 26.841 8.095 -0.192 -0.263 2.466 CG2 VAL 37 RIT C21 C21 C 0 1 N N N 7.665 26.518 4.481 -4.563 -0.967 1.737 C21 019 38 RIT N74 N74 N 0 1 N N N 6.423 26.400 3.958 -5.739 -1.624 1.719 N74 019 39 RIT C75 C75 C 0 1 N N N 5.969 27.345 2.938 -6.893 -1.079 2.438 C75 019 40 RIT O76 O76 O 0 1 N N N 8.471 27.427 4.192 -4.459 0.078 2.349 O76 019 41 RIT C77 C77 C 0 1 Y N N 5.910 26.849 1.559 -7.674 -0.173 1.521 C77 019 42 RIT C80 C80 C 0 1 Y N N 7.024 27.012 0.784 -8.732 -0.592 0.820 C80 019 43 RIT S81 S81 S 0 1 Y N N 6.639 26.257 -0.785 -9.340 0.775 -0.111 S81 019 44 RIT C82 C82 C 0 1 Y N N 5.087 25.736 -0.124 -8.112 1.773 0.535 C82 019 45 RIT N83 N83 N 0 1 Y N N 4.871 26.263 1.044 -7.373 1.098 1.350 N83 019 46 RIT C85 C85 C 0 1 N N N 4.497 24.886 -1.046 -7.923 3.231 0.206 C85 019 47 RIT C86 C86 C 0 1 N N N 4.139 25.131 -2.506 -7.677 3.387 -1.296 C86 019 48 RIT C90 C90 C 0 1 N N N 3.245 24.373 -0.462 -9.179 4.010 0.600 C90 019 49 RIT C95 C95 C 0 1 N N N 5.484 25.508 4.240 -5.864 -2.884 0.982 C95 019 50 RIT H1 H1 H 0 1 N N N 16.038 18.015 0.641 8.499 2.342 2.256 H1 013 51 RIT H4 H4 H 0 1 N N N 19.330 16.755 2.652 8.077 6.377 1.221 H4 013 52 RIT H61 H61 H 0 1 N N N 14.172 18.215 2.891 7.408 1.721 -1.307 H61 013 53 RIT H62A H62A H 0 0 N N N 14.997 17.902 4.458 8.062 0.890 0.126 H62A 013 54 RIT H11 H11 H 0 1 N N N 15.550 22.119 4.165 3.756 0.135 0.547 H11 015 55 RIT H12 H12 H 0 1 N N N 12.930 22.362 5.367 4.258 -1.830 -1.554 H12 015 56 RIT H13 H13 H 0 1 N N N 12.889 24.837 4.981 1.977 -2.628 -1.000 H13 015 57 RIT H141 H141 H 0 0 N N N 12.788 24.655 2.481 2.083 0.419 -1.057 H141 015 58 RIT H142 H142 H 0 0 N N N 13.087 22.872 2.765 2.369 -0.610 -2.481 H142 015 59 RIT H15 H15 H 0 1 N N N 10.981 22.612 3.828 0.105 -1.666 -2.076 H15 015 60 RIT H261 H261 H 0 0 N N N 15.024 24.032 6.605 4.005 -2.615 1.383 H261 015 61 RIT H262 H262 H 0 0 N N N 13.337 23.584 7.161 3.905 -3.756 0.020 H262 015 62 RIT H31 H31 H 0 1 N N N 12.812 22.146 8.344 6.105 -1.538 1.950 H31 015 63 RIT H32 H32 H 0 1 N N N 13.325 20.194 9.790 8.563 -1.673 1.884 H32 015 64 RIT H33 H33 H 0 1 N N N 15.572 19.150 9.789 9.672 -3.108 0.218 H33 015 65 RIT H34 H34 H 0 1 N N N 17.384 20.138 8.376 8.324 -4.407 -1.381 H34 015 66 RIT H35 H35 H 0 1 N N N 16.893 22.093 6.932 5.866 -4.278 -1.309 H35 015 67 RIT HO4 HO4 H 0 1 N N N 14.613 25.439 3.447 2.046 -0.628 1.103 HO4 015 68 RIT H441 H441 H 0 0 N N N 10.491 24.619 1.560 0.064 1.365 -2.425 H441 015 69 RIT H442 H442 H 0 0 N N N 11.215 23.016 1.245 0.488 0.206 -3.708 H442 015 70 RIT H48 H48 H 0 1 N N N 8.308 24.913 2.013 -2.212 1.524 -1.596 H48 015 71 RIT H49 H49 H 0 1 N N N 5.985 24.000 2.070 -4.602 1.201 -2.092 H49 015 72 RIT H50 H50 H 0 1 N N N 5.661 21.538 2.032 -5.290 -0.349 -3.878 H50 015 73 RIT H51 H51 H 0 1 N N N 7.596 20.022 1.994 -3.588 -1.575 -5.167 H51 015 74 RIT H52 H52 H 0 1 N N N 9.905 20.921 1.977 -1.198 -1.245 -4.677 H52 015 75 RIT H58 H58 H 0 1 N N N 10.380 25.483 3.778 -0.041 0.329 0.100 H58 015 76 RIT H20 H20 H 0 1 N N N 7.155 25.172 5.924 -3.583 -2.302 0.587 H VAL 77 RIT H19 H19 H 0 1 N N N 9.922 26.347 5.684 -2.406 0.321 1.100 HA VAL 78 RIT H62 H62 H 0 1 N N N 8.635 24.698 7.823 -2.067 -1.001 3.229 HB VAL 79 RIT H641 H641 H 0 0 N N N 10.448 25.343 9.370 -0.391 -2.753 1.375 HG11 VAL 80 RIT H642 H642 H 0 0 N N N 10.941 24.263 8.022 -0.461 -2.889 3.148 HG12 VAL 81 RIT H643 H643 H 0 0 N N N 11.350 26.012 7.968 -1.907 -3.238 2.171 HG13 VAL 82 RIT H681 H681 H 0 0 N N N 8.578 26.829 9.195 0.392 -0.574 3.333 HG21 VAL 83 RIT H682 H682 H 0 0 N N N 9.102 27.730 7.732 0.412 -0.368 1.565 HG22 VAL 84 RIT H683 H683 H 0 0 N N N 7.524 26.871 7.741 -0.492 0.778 2.584 HG23 VAL 85 RIT H751 H751 H 0 0 N N N 4.951 27.655 3.214 -7.533 -1.897 2.772 H751 019 86 RIT H752 H752 H 0 0 N N N 6.670 28.193 2.947 -6.549 -0.512 3.303 H752 019 87 RIT H80 H80 H 0 1 N N N 7.947 27.498 1.064 -9.142 -1.591 0.824 H80 019 88 RIT H85 H85 H 0 1 N N N 5.413 24.294 -1.189 -7.066 3.620 0.756 H85 019 89 RIT H861 H861 H 0 0 N N N 3.681 24.225 -2.929 -8.533 2.998 -1.847 H861 019 90 RIT H862 H862 H 0 0 N N N 3.427 25.967 -2.573 -7.540 4.442 -1.535 H862 019 91 RIT H863 H863 H 0 0 N N N 5.050 25.379 -3.070 -6.782 2.832 -1.578 H863 019 92 RIT H901 H901 H 0 0 N N N 2.757 23.694 -1.177 -9.354 3.899 1.670 H901 019 93 RIT H902 H902 H 0 0 N N N 3.470 23.827 0.466 -9.043 5.065 0.362 H902 019 94 RIT H903 H903 H 0 0 N N N 2.573 25.215 -0.239 -10.036 3.621 0.049 H903 019 95 RIT H951 H951 H 0 0 N N N 4.593 25.706 3.626 -5.616 -3.717 1.640 H951 019 96 RIT H952 H952 H 0 0 N N N 5.861 24.498 4.023 -6.887 -2.996 0.623 H952 019 97 RIT H953 H953 H 0 0 N N N 5.219 25.580 5.305 -5.180 -2.877 0.132 H953 019 98 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RIT C1 C2 DOUB Y N 1 RIT C1 N5 SING Y N 2 RIT C1 H1 SING N N 3 RIT C2 S3 SING Y N 4 RIT C2 C6 SING N N 5 RIT S3 C4 SING Y N 6 RIT C4 N5 DOUB Y N 7 RIT C4 H4 SING N N 8 RIT C6 O7 SING N N 9 RIT C6 H61 SING N N 10 RIT C6 H62A SING N N 11 RIT O7 C10 SING N N 12 RIT C10 N11 SING N N 13 RIT C10 O24 DOUB N N 14 RIT N11 C12 SING N N 15 RIT N11 H11 SING N N 16 RIT C12 C13 SING N N 17 RIT C12 C26 SING N N 18 RIT C12 H12 SING N N 19 RIT C13 C14 SING N N 20 RIT C13 O41 SING N N 21 RIT C13 H13 SING N N 22 RIT C14 C15 SING N N 23 RIT C14 H141 SING N N 24 RIT C14 H142 SING N N 25 RIT C15 C44 SING N N 26 RIT C15 N58 SING N N 27 RIT C15 H15 SING N N 28 RIT C18 C19 SING N N 29 RIT C18 N58 SING N N 30 RIT C18 O61 DOUB N N 31 RIT C19 N20 SING N N 32 RIT C19 C62 SING N N 33 RIT C19 H19 SING N N 34 RIT N20 C21 SING N N 35 RIT N20 H20 SING N N 36 RIT C21 N74 SING N N 37 RIT C21 O76 DOUB N N 38 RIT C26 C28 SING N N 39 RIT C26 H261 SING N N 40 RIT C26 H262 SING N N 41 RIT C28 C31 DOUB Y N 42 RIT C28 C35 SING Y N 43 RIT C31 C32 SING Y N 44 RIT C31 H31 SING N N 45 RIT C32 C33 DOUB Y N 46 RIT C32 H32 SING N N 47 RIT C33 C34 SING Y N 48 RIT C33 H33 SING N N 49 RIT C34 C35 DOUB Y N 50 RIT C34 H34 SING N N 51 RIT C35 H35 SING N N 52 RIT O41 HO4 SING N N 53 RIT C44 C45 SING N N 54 RIT C44 H441 SING N N 55 RIT C44 H442 SING N N 56 RIT C45 C48 DOUB Y N 57 RIT C45 C52 SING Y N 58 RIT C48 C49 SING Y N 59 RIT C48 H48 SING N N 60 RIT C49 C50 DOUB Y N 61 RIT C49 H49 SING N N 62 RIT C50 C51 SING Y N 63 RIT C50 H50 SING N N 64 RIT C51 C52 DOUB Y N 65 RIT C51 H51 SING N N 66 RIT C52 H52 SING N N 67 RIT N58 H58 SING N N 68 RIT C62 C64 SING N N 69 RIT C62 C68 SING N N 70 RIT C62 H62 SING N N 71 RIT C64 H641 SING N N 72 RIT C64 H642 SING N N 73 RIT C64 H643 SING N N 74 RIT C68 H681 SING N N 75 RIT C68 H682 SING N N 76 RIT C68 H683 SING N N 77 RIT N74 C75 SING N N 78 RIT N74 C95 SING N N 79 RIT C75 C77 SING N N 80 RIT C75 H751 SING N N 81 RIT C75 H752 SING N N 82 RIT C77 C80 DOUB Y N 83 RIT C77 N83 SING Y N 84 RIT C80 S81 SING Y N 85 RIT C80 H80 SING N N 86 RIT S81 C82 SING Y N 87 RIT C82 N83 DOUB Y N 88 RIT C82 C85 SING N N 89 RIT C85 C86 SING N N 90 RIT C85 C90 SING N N 91 RIT C85 H85 SING N N 92 RIT C86 H861 SING N N 93 RIT C86 H862 SING N N 94 RIT C86 H863 SING N N 95 RIT C90 H901 SING N N 96 RIT C90 H902 SING N N 97 RIT C90 H903 SING N N 98 RIT C95 H951 SING N N 99 RIT C95 H952 SING N N 100 RIT C95 H953 SING N N 101 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RIT SMILES ACDLabs 12.01 "O=C(OCc1scnc1)NC(Cc2ccccc2)C(O)CC(NC(=O)C(NC(=O)N(Cc3nc(sc3)C(C)C)C)C(C)C)Cc4ccccc4" RIT SMILES_CANONICAL CACTVS 3.370 "CC(C)[C@H](NC(=O)N(C)Cc1csc(n1)C(C)C)C(=O)N[C@H](C[C@H](O)[C@H](Cc2ccccc2)NC(=O)OCc3scnc3)Cc4ccccc4" RIT SMILES CACTVS 3.370 "CC(C)[CH](NC(=O)N(C)Cc1csc(n1)C(C)C)C(=O)N[CH](C[CH](O)[CH](Cc2ccccc2)NC(=O)OCc3scnc3)Cc4ccccc4" RIT SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CC(C)c1nc(cs1)CN(C)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](Cc2ccccc2)C[C@@H]([C@H](Cc3ccccc3)NC(=O)OCc4cncs4)O" RIT SMILES "OpenEye OEToolkits" 1.7.0 "CC(C)c1nc(cs1)CN(C)C(=O)NC(C(C)C)C(=O)NC(Cc2ccccc2)CC(C(Cc3ccccc3)NC(=O)OCc4cncs4)O" RIT InChI InChI 1.03 "InChI=1S/C37H48N6O5S2/c1-24(2)33(42-36(46)43(5)20-29-22-49-35(40-29)25(3)4)34(45)39-28(16-26-12-8-6-9-13-26)18-32(44)31(17-27-14-10-7-11-15-27)41-37(47)48-21-30-19-38-23-50-30/h6-15,19,22-25,28,31-33,44H,16-18,20-21H2,1-5H3,(H,39,45)(H,41,47)(H,42,46)/t28-,31-,32-,33-/m0/s1" RIT InChIKey InChI 1.03 NCDNCNXCDXHOMX-XGKFQTDJSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier RIT "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(2S,4S,5S)-4-hydroxy-1,6-diphenyl-5-{[(1,3-thiazol-5-ylmethoxy)carbonyl]amino}hexan-2-yl]-N~2~-(methyl{[2-(propan-2-yl)-1,3-thiazol-4-yl]methyl}carbamoyl)-L-valinamide" RIT "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "1,3-thiazol-5-ylmethyl N-[(2S,3S,5S)-3-hydroxy-5-[[(2S)-3-methyl-2-[[methyl-[(2-propan-2-yl-1,3-thiazol-4-yl)methyl]carbamoyl]amino]butanoyl]amino]-1,6-diphenyl-hexan-2-yl]carbamate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RIT "Create component" 1999-07-08 RCSB RIT "Modify subcomponent list" 2010-12-10 RCSB RIT "Modify descriptor" 2011-06-04 RCSB RIT "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id RIT _pdbx_chem_comp_synonyms.name A-84538 _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##