data_RYU # _chem_comp.id RYU _chem_comp.name "(2E,3S)-3-HYDROXY-5'-[(4-HYDROXYPIPERIDIN-1-YL)SULFONYL]-3-METHYL-1,3-DIHYDRO-2,3'-BIINDOL-2'(1'H)-ONE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H23 N3 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2005-01-11 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 441.500 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RYU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2BHH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RYU C1 C1 C 0 1 Y N N 3.825 24.406 7.696 3.071 0.645 -3.860 C1 RYU 1 RYU C2 C2 C 0 1 Y N N 5.096 24.090 7.067 3.672 0.396 -5.082 C2 RYU 2 RYU C3 C3 C 0 1 Y N N 5.496 24.694 5.807 2.957 -0.229 -6.086 C3 RYU 3 RYU C4 C4 C 0 1 Y N N 4.758 25.817 5.250 1.647 -0.608 -5.877 C4 RYU 4 RYU C5 C5 C 0 1 Y N N 3.588 26.250 5.990 1.034 -0.361 -4.649 C5 RYU 5 RYU C6 C6 C 0 1 Y N N 3.069 25.489 7.103 1.766 0.269 -3.646 C6 RYU 6 RYU C7 C7 C 0 1 N N S 1.766 25.991 7.489 0.841 0.394 -2.458 C7 RYU 7 RYU C71 C71 C 0 1 N N N 1.769 26.231 8.974 0.625 1.866 -2.100 C71 RYU 8 RYU O71 O71 O 0 1 N N N 0.809 25.103 7.207 1.367 -0.318 -1.337 O71 RYU 9 RYU C8 C8 C 0 1 N N N 1.714 27.198 6.676 -0.454 -0.233 -2.925 C8 RYU 10 RYU N9 N9 N 0 1 N N N 2.776 27.383 5.761 -0.255 -0.644 -4.204 N9 RYU 11 RYU C10 C10 C 0 1 N N N 0.725 28.249 6.797 -1.602 -0.361 -2.199 C10 RYU 12 RYU C11 C11 C 0 1 N N N 0.855 29.681 6.329 -2.906 -0.844 -2.669 C11 RYU 13 RYU O11 O11 O 0 1 N N N 1.776 30.013 5.589 -3.167 -1.211 -3.801 O11 RYU 14 RYU N12 N12 N 0 1 N N N -0.018 30.578 6.773 -3.760 -0.812 -1.633 N12 RYU 15 RYU C13 C13 C 0 1 Y N N -0.807 29.774 7.628 -3.142 -0.341 -0.481 C13 RYU 16 RYU C14 C14 C 0 1 Y N N -0.431 28.372 7.658 -1.802 -0.050 -0.765 C14 RYU 17 RYU C15 C15 C 0 1 Y N N -1.055 27.351 8.485 -0.965 0.445 0.228 C15 RYU 18 RYU C16 C16 C 0 1 Y N N -1.975 27.886 9.469 -1.456 0.639 1.503 C16 RYU 19 RYU C17 C17 C 0 1 Y N N -2.455 29.259 9.404 -2.779 0.347 1.789 C17 RYU 20 RYU C18 C18 C 0 1 Y N N -1.878 30.234 8.490 -3.620 -0.139 0.809 C18 RYU 21 RYU S19 S19 S 0 1 N N N -2.562 27.004 10.927 -0.399 1.260 2.768 S19 RYU 22 RYU O19 O19 O 0 1 N N N -1.514 27.557 12.212 0.651 1.939 2.094 O19 RYU 23 RYU O1 O1 O 0 1 N N N -4.158 27.658 10.824 -1.259 1.836 3.742 O1 RYU 24 RYU N20 N20 N 0 1 N N N -2.512 25.242 11.153 0.307 -0.042 3.507 N20 RYU 25 RYU C21 C21 C 0 1 N N N -2.302 24.618 12.479 1.583 -0.580 3.016 C21 RYU 26 RYU C22 C22 C 0 1 N N N -1.004 23.819 12.532 2.574 -0.641 4.182 C22 RYU 27 RYU C23 C23 C 0 1 N N N -0.836 22.868 11.344 1.955 -1.441 5.331 C23 RYU 28 RYU O23 O23 O 0 1 N N N 0.349 22.064 11.374 2.889 -1.528 6.409 O23 RYU 29 RYU C24 C24 C 0 1 N N N -1.071 23.592 10.020 0.682 -0.742 5.814 C24 RYU 30 RYU C25 C25 C 0 1 N N N -2.385 24.350 9.992 -0.326 -0.678 4.669 C25 RYU 31 RYU H1 H1 H 0 1 N N N 3.457 23.852 8.576 3.627 1.134 -3.074 H1 RYU 32 RYU H2 H2 H 0 1 N N N 5.775 23.373 7.558 4.697 0.691 -5.250 H2 RYU 33 RYU H3 H3 H 0 1 N N N 6.371 24.296 5.266 3.426 -0.423 -7.039 H3 RYU 34 RYU H4 H4 H 0 1 N N N 5.071 26.312 4.316 1.095 -1.097 -6.666 H4 RYU 35 RYU H711 1H71 H 0 0 N N N 0.766 26.617 9.271 1.549 2.282 -1.698 H711 RYU 36 RYU H712 2H71 H 0 0 N N N 2.599 26.901 9.298 0.337 2.419 -2.995 H712 RYU 37 RYU H713 3H71 H 0 0 N N N 2.068 25.327 9.553 -0.164 1.947 -1.354 H713 RYU 38 RYU H71 H71 H 0 1 N N N -0.045 25.432 7.460 2.204 0.106 -1.103 H71 RYU 39 RYU H9 H9 H 0 1 N N N 2.920 28.146 5.099 -0.931 -1.083 -4.744 H9 RYU 40 RYU H12 H12 H 0 1 N N N -0.097 31.572 6.557 -4.691 -1.082 -1.682 H12 RYU 41 RYU H15 H15 H 0 1 N N N -0.848 26.273 8.374 0.066 0.673 0.004 H15 RYU 42 RYU H17 H17 H 0 1 N N N -3.280 29.569 10.067 -3.157 0.501 2.789 H17 RYU 43 RYU H18 H18 H 0 1 N N N -2.239 31.276 8.455 -4.650 -0.363 1.044 H18 RYU 44 RYU H211 1H21 H 0 0 N N N -3.176 23.992 12.775 1.428 -1.581 2.615 H211 RYU 45 RYU H212 2H21 H 0 0 N N N -2.345 25.376 13.295 1.977 0.070 2.235 H212 RYU 46 RYU H221 1H22 H 0 0 N N N -0.915 23.268 13.498 3.493 -1.127 3.854 H221 RYU 47 RYU H222 2H22 H 0 0 N N N -0.124 24.497 12.626 2.798 0.369 4.523 H222 RYU 48 RYU H23 H23 H 0 1 N N N -1.679 22.144 11.432 1.708 -2.444 4.983 H23 RYU 49 RYU HA HA H 0 1 N N N 0.453 21.474 10.637 2.461 -2.038 7.109 HA RYU 50 RYU H241 1H24 H 0 0 N N N -0.216 24.264 9.775 0.255 -1.300 6.647 H241 RYU 51 RYU H242 2H24 H 0 0 N N N -0.998 22.886 9.160 0.924 0.269 6.139 H242 RYU 52 RYU H251 1H25 H 0 0 N N N -2.517 24.904 9.034 -1.194 -0.095 4.979 H251 RYU 53 RYU H252 2H25 H 0 0 N N N -3.255 23.657 9.911 -0.639 -1.688 4.401 H252 RYU 54 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RYU C1 C2 DOUB Y N 1 RYU C1 C6 SING Y N 2 RYU C1 H1 SING N N 3 RYU C2 C3 SING Y N 4 RYU C2 H2 SING N N 5 RYU C3 C4 DOUB Y N 6 RYU C3 H3 SING N N 7 RYU C4 C5 SING Y N 8 RYU C4 H4 SING N N 9 RYU C5 C6 DOUB Y N 10 RYU C5 N9 SING N N 11 RYU C6 C7 SING N N 12 RYU C7 C71 SING N N 13 RYU C7 O71 SING N N 14 RYU C7 C8 SING N N 15 RYU C71 H711 SING N N 16 RYU C71 H712 SING N N 17 RYU C71 H713 SING N N 18 RYU O71 H71 SING N N 19 RYU C8 N9 SING N N 20 RYU C8 C10 DOUB N Z 21 RYU N9 H9 SING N N 22 RYU C10 C11 SING N N 23 RYU C10 C14 SING N N 24 RYU C11 O11 DOUB N N 25 RYU C11 N12 SING N N 26 RYU N12 C13 SING N N 27 RYU N12 H12 SING N N 28 RYU C13 C14 DOUB Y N 29 RYU C13 C18 SING Y N 30 RYU C14 C15 SING Y N 31 RYU C15 C16 DOUB Y N 32 RYU C15 H15 SING N N 33 RYU C16 C17 SING Y N 34 RYU C16 S19 SING N N 35 RYU C17 C18 DOUB Y N 36 RYU C17 H17 SING N N 37 RYU C18 H18 SING N N 38 RYU S19 O19 DOUB N N 39 RYU S19 O1 DOUB N N 40 RYU S19 N20 SING N N 41 RYU N20 C21 SING N N 42 RYU N20 C25 SING N N 43 RYU C21 C22 SING N N 44 RYU C21 H211 SING N N 45 RYU C21 H212 SING N N 46 RYU C22 C23 SING N N 47 RYU C22 H221 SING N N 48 RYU C22 H222 SING N N 49 RYU C23 O23 SING N N 50 RYU C23 C24 SING N N 51 RYU C23 H23 SING N N 52 RYU O23 HA SING N N 53 RYU C24 C25 SING N N 54 RYU C24 H241 SING N N 55 RYU C24 H242 SING N N 56 RYU C25 H251 SING N N 57 RYU C25 H252 SING N N 58 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RYU SMILES ACDLabs 10.04 "O=S(=O)(c4cc3\C(=C2\Nc1ccccc1C2(O)C)C(=O)Nc3cc4)N5CCC(O)CC5" RYU SMILES_CANONICAL CACTVS 3.341 "C[C@@]1(O)\C(Nc2ccccc12)=C3\C(=O)Nc4ccc(cc34)[S](=O)(=O)N5CCC(O)CC5" RYU SMILES CACTVS 3.341 "C[C]1(O)C(Nc2ccccc12)=C3C(=O)Nc4ccc(cc34)[S](=O)(=O)N5CCC(O)CC5" RYU SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[C@@]1(c2ccccc2NC1=C3c4cc(ccc4NC3=O)S(=O)(=O)N5CCC(CC5)O)O" RYU SMILES "OpenEye OEToolkits" 1.5.0 "CC1(c2ccccc2NC1=C3c4cc(ccc4NC3=O)S(=O)(=O)N5CCC(CC5)O)O" RYU InChI InChI 1.03 "InChI=1S/C22H23N3O5S/c1-22(28)16-4-2-3-5-18(16)23-20(22)19-15-12-14(6-7-17(15)24-21(19)27)31(29,30)25-10-8-13(26)9-11-25/h2-7,12-13,23,26,28H,8-11H2,1H3,(H,24,27)/b20-19-/t22-/m0/s1" RYU InChIKey InChI 1.03 AYOAIABDFUJDKQ-SQJPUDIVSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier RYU "SYSTEMATIC NAME" ACDLabs 10.04 "(2Z,3S)-3-hydroxy-5'-[(4-hydroxypiperidin-1-yl)sulfonyl]-3-methyl-1,3-dihydro-2,3'-biindol-2'(1'H)-one" RYU "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "3-[(3S)-3-hydroxy-3-methyl-1H-indol-2-ylidene]-5-(4-hydroxypiperidin-1-yl)sulfonyl-1H-indol-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RYU "Create component" 2005-01-11 EBI RYU "Modify descriptor" 2011-06-04 RCSB #