data_S4R # _chem_comp.id S4R _chem_comp.name Itacitinib _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H23 F4 N9 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "2-[1-[1-[3-fluoranyl-2-(trifluoromethyl)pyridin-4-yl]carbonylpiperidin-4-yl]-3-[4-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)pyrazol-1-yl]azetidin-3-yl]ethanenitrile" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-12-13 _chem_comp.pdbx_modified_date 2023-12-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 553.514 _chem_comp.one_letter_code ? _chem_comp.three_letter_code S4R _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8BXC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal S4R C10 C1 C 0 1 N N N N N N 14.068 -18.828 41.586 -1.181 -0.622 1.431 C10 S4R 1 S4R C15 C2 C 0 1 Y N N N N N 12.716 -15.384 42.787 -4.637 -0.739 -0.129 C15 S4R 2 S4R C17 C3 C 0 1 Y N N N N N 13.076 -16.019 44.924 -5.070 0.984 1.235 C17 S4R 3 S4R C20 C4 C 0 1 Y N N N N N 12.358 -12.299 43.705 -8.037 0.730 0.312 C20 S4R 4 S4R C21 C5 C 0 1 Y N N N N N 12.619 -11.997 42.315 -8.271 1.083 1.710 C21 S4R 5 S4R C22 C6 C 0 1 Y N N N N N 12.380 -10.658 42.081 -9.576 1.383 1.822 C22 S4R 6 S4R C24 C7 C 0 1 Y N N N N N 11.947 -11.064 44.304 -9.281 0.852 -0.338 C24 S4R 7 S4R C26 C8 C 0 1 Y N N N N N 11.698 -12.153 46.376 -8.273 0.221 -2.308 C26 S4R 8 S4R C28 C9 C 0 1 N N N N N N 17.477 -21.131 37.287 4.366 0.961 -1.458 C28 S4R 9 S4R C01 C10 C 0 1 N N N N N N 16.812 -19.475 40.497 1.855 -0.041 0.812 C01 S4R 10 S4R C02 C11 C 0 1 N N N N N N 16.484 -20.661 39.652 2.808 1.094 0.425 C02 S4R 11 S4R C04 C12 C 0 1 N N N N N N 15.467 -19.411 37.890 1.969 0.954 -1.956 C04 S4R 12 S4R C05 C13 C 0 1 N N N N N N 15.785 -18.085 38.518 1.025 -0.181 -1.542 C05 S4R 13 S4R C06 C14 C 0 1 N N N N N N 15.835 -18.303 40.093 0.613 0.012 -0.080 C06 S4R 14 S4R C08 C15 C 0 1 N N N N N N 13.686 -17.063 40.314 -1.484 -1.101 -0.597 C08 S4R 15 S4R C09 C16 C 0 1 N N N N N N 13.063 -17.642 41.598 -2.333 -1.302 0.671 C09 S4R 16 S4R C11 C17 C 0 1 N N N N N N 11.607 -18.174 41.425 -2.537 -2.771 1.049 C11 S4R 17 S4R C12 C18 C 0 1 N N N N N N 10.645 -17.055 40.992 -3.657 -3.326 0.271 C12 S4R 18 S4R C16 C19 C 0 1 Y N N N N N 12.776 -14.867 44.097 -5.589 0.189 0.191 C16 S4R 19 S4R C19 C20 C 0 1 Y N N N N N 12.437 -13.466 44.565 -6.919 0.334 -0.442 C19 S4R 20 S4R C30 C21 C 0 1 Y N N N N N 17.474 -20.872 35.714 5.488 1.141 -0.510 C30 S4R 21 S4R C31 C22 C 0 1 Y N N N N N 17.828 -19.588 35.156 6.527 0.204 -0.437 C31 S4R 22 S4R C32 C23 C 0 1 Y N N N N N 17.788 -19.444 33.737 7.556 0.414 0.465 C32 S4R 23 S4R C34 C24 C 0 1 Y N N N N N 17.100 -21.661 33.404 6.610 2.384 1.202 C34 S4R 24 S4R C35 C25 C 0 1 Y N N N N N 17.111 -21.893 34.803 5.545 2.255 0.333 C35 S4R 25 S4R C36 C26 C 0 1 N N N N N N 18.175 -18.038 33.087 8.681 -0.584 0.556 C36 S4R 26 S4R F37 F1 F 0 1 N N N N N N 17.287 -17.087 33.430 9.698 -0.224 -0.336 F37 S4R 27 S4R F38 F2 F 0 1 N N N N N N 18.220 -18.117 31.747 9.188 -0.599 1.860 F38 S4R 28 S4R F39 F3 F 0 1 N N N N N N 19.372 -17.627 33.549 8.203 -1.857 0.227 F39 S4R 29 S4R F40 F4 F 0 1 N N N N N N 18.179 -18.555 35.919 6.524 -0.888 -1.233 F40 S4R 30 S4R N03 N1 N 0 1 N N N N N N 16.527 -20.474 38.180 3.095 1.001 -1.013 N03 S4R 31 S4R N07 N2 N 0 1 N N N N N N 14.371 -18.439 40.213 -0.317 -1.055 0.311 N07 S4R 32 S4R N13 N3 N 0 1 N N N N N N 9.904 -16.149 40.808 -4.520 -3.755 -0.330 N13 S4R 33 S4R N14 N4 N 0 1 Y N N N N N 13.043 -16.730 42.832 -3.579 -0.531 0.676 N14 S4R 34 S4R N18 N5 N 0 1 Y N N N N N 13.242 -17.133 44.151 -3.872 0.548 1.518 N18 S4R 35 S4R N23 N6 N 0 1 Y N N N N N 11.965 -10.057 43.288 -10.190 1.249 0.604 N23 S4R 36 S4R N25 N7 N 0 1 Y N N N N N 11.621 -11.013 45.656 -9.346 0.588 -1.640 N25 S4R 37 S4R N27 N8 N 0 1 Y N N N N N 12.088 -13.390 45.872 -7.088 0.093 -1.741 N27 S4R 38 S4R N33 N9 N 0 1 Y N N N N N 17.435 -20.458 32.890 7.565 1.477 1.244 N33 S4R 39 S4R O29 O1 O 0 1 N N N N N N 18.288 -21.956 37.707 4.591 0.775 -2.638 O29 S4R 40 S4R H101 H1 H 0 0 N N N N N N 13.611 -19.823 41.695 -1.286 0.461 1.512 H101 S4R 41 S4R H102 H2 H 0 0 N N N N N N 14.907 -18.731 42.290 -0.941 -1.097 2.383 H102 S4R 42 S4R H151 H3 H 0 0 N N N N N N 12.459 -14.826 41.899 -4.722 -1.503 -0.888 H151 S4R 43 S4R H171 H4 H 0 0 N N N N N N 13.157 -15.999 46.001 -5.575 1.809 1.715 H171 S4R 44 S4R H211 H5 H 0 0 N N N N N N 12.950 -12.710 41.574 -7.537 1.099 2.502 H211 S4R 45 S4R H221 H6 H 0 0 N N N N N N 12.492 -10.154 41.132 -10.067 1.686 2.735 H221 S4R 46 S4R H261 H7 H 0 0 N N N N N N 11.437 -12.101 47.423 -8.366 0.015 -3.364 H261 S4R 47 S4R H011 H8 H 0 0 N N N N N N 16.676 -19.725 41.560 2.358 -0.999 0.679 H011 S4R 48 S4R H012 H9 H 0 0 N N N N N N 17.854 -19.169 40.323 1.559 0.072 1.855 H012 S4R 49 S4R H022 H10 H 0 0 N N N N N N 15.466 -20.985 39.916 2.339 2.054 0.643 H022 S4R 50 S4R H021 H11 H 0 0 N N N N N N 17.199 -21.457 39.906 3.734 1.003 0.991 H021 S4R 51 S4R H042 H12 H 0 0 N N N N N N 15.394 -19.275 36.801 2.344 0.768 -2.963 H042 S4R 52 S4R H041 H13 H 0 0 N N N N N N 14.501 -19.762 38.281 1.432 1.902 -1.933 H041 S4R 53 S4R H052 H14 H 0 0 N N N N N N 16.759 -17.723 38.158 0.138 -0.166 -2.175 H052 S4R 54 S4R H051 H15 H 0 0 N N N N N N 15.005 -17.352 38.265 1.535 -1.138 -1.652 H051 S4R 55 S4R H061 H16 H 0 0 N N N N N N 16.175 -17.372 40.571 0.125 0.980 0.034 H061 S4R 56 S4R H082 H17 H 0 0 N N N N N N 14.363 -16.209 40.462 -1.486 -1.960 -1.268 H082 S4R 57 S4R H081 H18 H 0 0 N N N N N N 12.974 -16.831 39.508 -1.680 -0.160 -1.111 H081 S4R 58 S4R H112 H19 H 0 0 N N N N N N 11.263 -18.590 42.383 -1.629 -3.332 0.830 H112 S4R 59 S4R H111 H20 H 0 0 N N N N N N 11.604 -18.964 40.660 -2.763 -2.844 2.113 H111 S4R 60 S4R H341 H21 H 0 0 N N N N N N 16.818 -22.462 32.737 6.662 3.242 1.857 H341 S4R 61 S4R H351 H22 H 0 0 N N N N N N 16.837 -22.867 35.181 4.767 3.004 0.305 H351 S4R 62 S4R H231 H24 H 0 0 N N N N N N 11.725 -9.094 43.412 -11.131 1.412 0.435 H231 S4R 63 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal S4R F38 C36 SING N N 1 S4R N33 C34 DOUB Y N 2 S4R N33 C32 SING Y N 3 S4R C36 F37 SING N N 4 S4R C36 F39 SING N N 5 S4R C36 C32 SING N N 6 S4R C34 C35 SING Y N 7 S4R C32 C31 DOUB Y N 8 S4R C35 C30 DOUB Y N 9 S4R C31 C30 SING Y N 10 S4R C31 F40 SING N N 11 S4R C30 C28 SING N N 12 S4R C28 O29 DOUB N N 13 S4R C28 N03 SING N N 14 S4R C04 N03 SING N N 15 S4R C04 C05 SING N N 16 S4R N03 C02 SING N N 17 S4R C05 C06 SING N N 18 S4R C02 C01 SING N N 19 S4R C06 N07 SING N N 20 S4R C06 C01 SING N N 21 S4R N07 C08 SING N N 22 S4R N07 C10 SING N N 23 S4R C08 C09 SING N N 24 S4R N13 C12 TRIP N N 25 S4R C12 C11 SING N N 26 S4R C11 C09 SING N N 27 S4R C10 C09 SING N N 28 S4R C09 N14 SING N N 29 S4R C22 C21 DOUB Y N 30 S4R C22 N23 SING Y N 31 S4R C21 C20 SING Y N 32 S4R C15 N14 SING Y N 33 S4R C15 C16 DOUB Y N 34 S4R N14 N18 SING Y N 35 S4R N23 C24 SING Y N 36 S4R C20 C24 DOUB Y N 37 S4R C20 C19 SING Y N 38 S4R C16 C19 SING N N 39 S4R C16 C17 SING Y N 40 S4R N18 C17 DOUB Y N 41 S4R C24 N25 SING Y N 42 S4R C19 N27 DOUB Y N 43 S4R N25 C26 DOUB Y N 44 S4R N27 C26 SING Y N 45 S4R C10 H101 SING N N 46 S4R C10 H102 SING N N 47 S4R C15 H151 SING N N 48 S4R C17 H171 SING N N 49 S4R C21 H211 SING N N 50 S4R C22 H221 SING N N 51 S4R C26 H261 SING N N 52 S4R C01 H011 SING N N 53 S4R C01 H012 SING N N 54 S4R C02 H022 SING N N 55 S4R C02 H021 SING N N 56 S4R C04 H042 SING N N 57 S4R C04 H041 SING N N 58 S4R C05 H052 SING N N 59 S4R C05 H051 SING N N 60 S4R C06 H061 SING N N 61 S4R C08 H082 SING N N 62 S4R C08 H081 SING N N 63 S4R C11 H112 SING N N 64 S4R C11 H111 SING N N 65 S4R C34 H341 SING N N 66 S4R C35 H351 SING N N 67 S4R N23 H231 SING N N 68 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor S4R InChI InChI 1.06 "InChI=1S/C26H23F4N9O/c27-20-18(1-7-32-22(20)26(28,29)30)24(40)37-9-3-17(4-10-37)38-13-25(14-38,5-6-31)39-12-16(11-36-39)21-19-2-8-33-23(19)35-15-34-21/h1-2,7-8,11-12,15,17H,3-5,9-10,13-14H2,(H,33,34,35)" S4R InChIKey InChI 1.06 KTBSXLIQKWEBRB-UHFFFAOYSA-N S4R SMILES_CANONICAL CACTVS 3.385 "Fc1c(ccnc1C(F)(F)F)C(=O)N2CCC(CC2)N3CC(CC#N)(C3)n4cc(cn4)c5ncnc6[nH]ccc56" S4R SMILES CACTVS 3.385 "Fc1c(ccnc1C(F)(F)F)C(=O)N2CCC(CC2)N3CC(CC#N)(C3)n4cc(cn4)c5ncnc6[nH]ccc56" S4R SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)c3cnn(c3)C4(CN(C4)C5CCN(CC5)C(=O)c6ccnc(c6F)C(F)(F)F)CC#N" S4R SMILES "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)c3cnn(c3)C4(CN(C4)C5CCN(CC5)C(=O)c6ccnc(c6F)C(F)(F)F)CC#N" # _pdbx_chem_comp_identifier.comp_id S4R _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 3.1.0.0 _pdbx_chem_comp_identifier.identifier "2-[1-[1-[3-fluoranyl-2-(trifluoromethyl)pyridin-4-yl]carbonylpiperidin-4-yl]-3-[4-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)pyrazol-1-yl]azetidin-3-yl]ethanenitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site S4R "Create component" 2022-12-13 PDBE S4R "Initial release" 2023-12-20 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id S4R _pdbx_chem_comp_synonyms.name "2-[1-[1-[3-fluoranyl-2-(trifluoromethyl)pyridin-4-yl]carbonylpiperidin-4-yl]-3-[4-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)pyrazol-1-yl]azetidin-3-yl]ethanenitrile" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? #