data_S8V # _chem_comp.id S8V _chem_comp.name "~{N}-[[(3~{S})-oxolan-3-yl]methyl]cyclopropanamine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H15 N O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-03-05 _chem_comp.pdbx_modified_date 2020-04-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 141.211 _chem_comp.one_letter_code ? _chem_comp.three_letter_code S8V _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5R8P _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal S8V C4 C1 C 0 1 N N S 38.628 4.377 73.581 -1.111 0.479 -0.476 C4 S8V 1 S8V C5 C2 C 0 1 N N N 38.375 4.832 72.131 -2.307 1.187 0.207 C5 S8V 2 S8V C6 C3 C 0 1 N N N 39.747 5.186 71.591 -3.428 0.123 0.083 C6 S8V 3 S8V C7 C4 C 0 1 N N N 40.159 4.492 73.784 -1.476 -1.018 -0.419 C7 S8V 4 S8V N N1 N 0 1 N N N 38.185 2.684 75.268 1.305 0.087 -0.383 N S8V 5 S8V C C5 C 0 1 N N N 38.163 2.947 73.810 0.181 0.744 0.299 C S8V 6 S8V O O1 O 0 1 N N N 40.736 4.925 72.590 -2.730 -1.126 0.276 O S8V 7 S8V C1 C6 C 0 1 N N N 37.988 1.277 75.587 2.565 0.321 0.334 C1 S8V 8 S8V C2 C7 C 0 1 N N N 38.891 0.674 76.672 3.862 0.243 -0.474 C2 S8V 9 S8V C3 C8 C 0 1 N N N 39.148 0.361 75.202 3.508 -0.871 0.513 C3 S8V 10 S8V H1 H1 H 0 1 N N N 38.112 5.055 74.277 -1.010 0.808 -1.510 H1 S8V 11 S8V H2 H2 H 0 1 N N N 37.712 5.710 72.110 -2.087 1.400 1.253 H2 S8V 12 S8V H3 H3 H 0 1 N N N 39.958 4.578 70.699 -4.180 0.266 0.859 H3 S8V 13 S8V H4 H4 H 0 1 N N N 40.571 3.510 74.060 -1.577 -1.413 -1.430 H4 S8V 14 S8V H5 H5 H 0 1 N N N 40.373 5.217 74.583 -0.703 -1.567 0.118 H5 S8V 15 S8V H6 H6 H 0 1 N N N 39.070 2.974 75.632 1.131 -0.900 -0.497 H6 S8V 16 S8V H8 H8 H 0 1 N N N 37.141 2.821 73.424 0.363 1.818 0.345 H8 S8V 17 S8V H9 H9 H 0 1 N N N 38.838 2.248 73.295 0.088 0.347 1.309 H9 S8V 18 S8V H10 H10 H 0 1 N N N 36.974 0.859 75.499 2.518 1.052 1.141 H10 S8V 19 S8V H11 H11 H 0 1 N N N 38.501 -0.107 77.341 3.780 0.018 -1.538 H11 S8V 20 S8V H12 H12 H 0 1 N N N 39.589 1.318 77.228 4.669 0.923 -0.198 H12 S8V 21 S8V H13 H13 H 0 1 N N N 38.945 -0.647 74.812 4.081 -0.924 1.439 H13 S8V 22 S8V H14 H14 H 0 1 N N N 40.033 0.778 74.699 3.192 -1.828 0.099 H14 S8V 23 S8V H15 H15 H 0 1 N N N 37.925 4.019 71.543 -2.575 2.099 -0.327 H15 S8V 24 S8V H16 H16 H 0 1 N N N 39.771 6.252 71.322 -3.884 0.159 -0.906 H16 S8V 25 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal S8V C6 C5 SING N N 1 S8V C6 O SING N N 2 S8V C5 C4 SING N N 3 S8V O C7 SING N N 4 S8V C4 C7 SING N N 5 S8V C4 C SING N N 6 S8V C N SING N N 7 S8V C3 C1 SING N N 8 S8V C3 C2 SING N N 9 S8V N C1 SING N N 10 S8V C1 C2 SING N N 11 S8V C4 H1 SING N N 12 S8V C5 H2 SING N N 13 S8V C6 H3 SING N N 14 S8V C7 H4 SING N N 15 S8V C7 H5 SING N N 16 S8V N H6 SING N N 17 S8V C H8 SING N N 18 S8V C H9 SING N N 19 S8V C1 H10 SING N N 20 S8V C2 H11 SING N N 21 S8V C2 H12 SING N N 22 S8V C3 H13 SING N N 23 S8V C3 H14 SING N N 24 S8V C5 H15 SING N N 25 S8V C6 H16 SING N N 26 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor S8V InChI InChI 1.03 "InChI=1S/C8H15NO/c1-2-8(1)9-5-7-3-4-10-6-7/h7-9H,1-6H2/t7-/m0/s1" S8V InChIKey InChI 1.03 XTBAPHZUOIOBDQ-ZETCQYMHSA-N S8V SMILES_CANONICAL CACTVS 3.385 "C1C[C@@H](CNC2CC2)CO1" S8V SMILES CACTVS 3.385 "C1C[CH](CNC2CC2)CO1" S8V SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 C1COC[C@@H]1CNC2CC2 S8V SMILES "OpenEye OEToolkits" 2.0.6 C1CC1NCC2CCOC2 # _pdbx_chem_comp_identifier.comp_id S8V _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.6 _pdbx_chem_comp_identifier.identifier "~{N}-[[(3~{S})-oxolan-3-yl]methyl]cyclopropanamine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site S8V "Create component" 2020-03-05 RCSB S8V "Initial release" 2020-04-22 RCSB ##