data_SCM # _chem_comp.id SCM _chem_comp.name SPECTINOMYCIN _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H24 N2 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "ACTINOSPECTACIN; ESPECTINOMICINA; CHX-3101" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2000-08-25 _chem_comp.pdbx_modified_date 2020-05-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 332.350 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SCM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1FJG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SCM O1 O1 O 0 1 N N N 197.762 126.436 -3.695 2.090 1.477 -0.607 O1 SCM 1 SCM C2 C2 C 0 1 N N R 196.714 125.759 -2.981 3.482 1.300 -0.862 C2 SCM 2 SCM C2M C2M C 0 1 N N N 196.814 124.258 -3.233 3.856 2.008 -2.165 C2M SCM 3 SCM C3 C3 C 0 1 N N N 195.299 126.223 -3.395 3.801 -0.195 -0.986 C3 SCM 4 SCM C4 C4 C 0 1 N N N 195.196 127.643 -3.932 3.315 -0.906 0.290 C4 SCM 5 SCM O4 O4 O 0 1 N N N 194.129 128.112 -4.245 4.002 -1.715 0.866 O4 SCM 6 SCM C5 C5 C 0 1 N N S 196.464 128.426 -4.149 1.928 -0.507 0.767 C5 SCM 7 SCM O5 O5 O 0 1 N N N 196.281 129.790 -3.797 1.709 -0.975 2.100 O5 SCM 8 SCM C6 C6 C 0 1 N N S 197.618 127.784 -3.362 1.826 1.021 0.716 C6 SCM 9 SCM O1B O1B O 0 1 N N N 196.792 128.499 -5.554 0.967 -1.077 -0.122 O1B SCM 10 SCM O2B O2B O 0 1 N N N 198.871 128.435 -3.608 0.531 1.439 1.131 O2B SCM 11 SCM C7 C7 C 0 1 N N R 198.023 129.210 -5.754 -0.325 -0.643 0.307 C7 SCM 12 SCM C8 C8 C 0 1 N N S 198.300 129.278 -7.251 -1.384 -1.264 -0.608 C8 SCM 13 SCM N8 N8 N 0 1 N N N 197.160 130.010 -7.883 -1.309 -2.729 -0.516 N8 SCM 14 SCM C8M C8M C 0 1 N N N 197.377 130.272 -9.304 -1.848 -3.259 -1.775 C8M SCM 15 SCM C9 C9 C 0 1 N N S 199.663 129.990 -7.483 -2.776 -0.799 -0.178 C9 SCM 16 SCM O9 O9 O 0 1 N N N 199.612 131.287 -6.973 -3.018 -1.198 1.173 O9 SCM 17 SCM C10 C10 C 0 1 N N R 200.787 129.233 -6.764 -2.852 0.727 -0.281 C10 SCM 18 SCM N10 N10 N 0 1 N N N 202.034 129.911 -6.972 -4.191 1.179 0.121 N10 SCM 19 SCM C1M C1M C 0 1 N N N 202.965 128.940 -7.480 -5.056 1.036 -1.057 C1M SCM 20 SCM C11 C11 C 0 1 N N S 200.489 129.195 -5.260 -1.804 1.348 0.643 C11 SCM 21 SCM O11 O11 O 0 1 N N N 201.530 128.491 -4.610 -1.867 2.774 0.578 O11 SCM 22 SCM C12 C12 C 0 1 N N R 199.158 128.470 -5.028 -0.410 0.882 0.230 C12 SCM 23 SCM H2 H2 H 0 1 N N N 196.852 126.003 -1.917 4.058 1.726 -0.040 H2 SCM 24 SCM H2M1 1H2M H 0 0 N N N 195.942 123.754 -2.792 3.635 3.072 -2.077 H2M1 SCM 25 SCM H2M2 2H2M H 0 0 N N N 197.734 123.870 -2.772 4.919 1.873 -2.361 H2M2 SCM 26 SCM H2M3 3H2M H 0 0 N N N 196.838 124.068 -4.316 3.278 1.584 -2.987 H2M3 SCM 27 SCM H31 1H3 H 0 1 N N N 194.694 126.203 -2.476 3.288 -0.610 -1.854 H31 SCM 28 SCM H32 2H3 H 0 1 N N N 194.950 125.546 -4.188 4.877 -0.335 -1.092 H32 SCM 29 SCM HO5 HO5 H 0 1 N N N 196.240 129.871 -2.851 1.800 -1.937 2.077 HO5 SCM 30 SCM H6 H6 H 0 1 N N N 197.357 127.892 -2.299 2.568 1.447 1.391 H6 SCM 31 SCM H7 H7 H 0 1 N N N 197.954 130.230 -5.348 -0.496 -0.966 1.334 H7 SCM 32 SCM H8 H8 H 0 1 N N N 198.375 128.279 -7.705 -1.201 -0.956 -1.637 H8 SCM 33 SCM HN8 HN8 H 0 1 N N N 196.335 129.453 -7.787 -0.329 -2.968 -0.497 HN8 SCM 34 SCM H8M1 1H8M H 0 0 N N N 196.543 129.852 -9.886 -2.881 -2.931 -1.895 H8M1 SCM 35 SCM H8M2 2H8M H 0 0 N N N 198.320 129.804 -9.623 -1.251 -2.892 -2.610 H8M2 SCM 36 SCM H8M3 3H8M H 0 0 N N N 197.432 131.358 -9.473 -1.814 -4.348 -1.755 H8M3 SCM 37 SCM H9 H9 H 0 1 N N N 199.861 130.013 -8.565 -3.527 -1.245 -0.830 H9 SCM 38 SCM HO9 HO9 H 0 1 N N N 199.600 131.254 -6.024 -3.902 -0.883 1.403 HO9 SCM 39 SCM H10 H10 H 0 1 N N N 200.850 128.210 -7.163 -2.658 1.032 -1.309 H10 SCM 40 SCM HN1 HN1 H 0 1 N N N 201.918 130.656 -7.629 -4.118 2.168 0.309 HN1 SCM 41 SCM H1M1 1H1M H 0 0 N N N 202.518 127.937 -7.420 -4.711 1.705 -1.845 H1M1 SCM 42 SCM H1M2 2H1M H 0 0 N N N 203.887 128.967 -6.880 -5.019 0.006 -1.412 H1M2 SCM 43 SCM H1M3 3H1M H 0 0 N N N 203.203 129.173 -8.528 -6.081 1.290 -0.788 H1M3 SCM 44 SCM H11 H11 H 0 1 N N N 200.422 130.218 -4.860 -2.008 1.022 1.663 H11 SCM 45 SCM HO1 HO1 H 0 1 N N N 202.238 128.333 -5.224 -2.723 3.033 0.945 HO1 SCM 46 SCM H12 H12 H 0 1 N N N 199.233 127.445 -5.421 -0.201 1.236 -0.780 H12 SCM 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SCM O1 C2 SING N N 1 SCM O1 C6 SING N N 2 SCM C2 C2M SING N N 3 SCM C2 C3 SING N N 4 SCM C2 H2 SING N N 5 SCM C2M H2M1 SING N N 6 SCM C2M H2M2 SING N N 7 SCM C2M H2M3 SING N N 8 SCM C3 C4 SING N N 9 SCM C3 H31 SING N N 10 SCM C3 H32 SING N N 11 SCM C4 O4 DOUB N N 12 SCM C4 C5 SING N N 13 SCM C5 O5 SING N N 14 SCM C5 C6 SING N N 15 SCM C5 O1B SING N N 16 SCM O5 HO5 SING N N 17 SCM C6 O2B SING N N 18 SCM C6 H6 SING N N 19 SCM O1B C7 SING N N 20 SCM O2B C12 SING N N 21 SCM C7 C8 SING N N 22 SCM C7 C12 SING N N 23 SCM C7 H7 SING N N 24 SCM C8 N8 SING N N 25 SCM C8 C9 SING N N 26 SCM C8 H8 SING N N 27 SCM N8 C8M SING N N 28 SCM N8 HN8 SING N N 29 SCM C8M H8M1 SING N N 30 SCM C8M H8M2 SING N N 31 SCM C8M H8M3 SING N N 32 SCM C9 O9 SING N N 33 SCM C9 C10 SING N N 34 SCM C9 H9 SING N N 35 SCM O9 HO9 SING N N 36 SCM C10 N10 SING N N 37 SCM C10 C11 SING N N 38 SCM C10 H10 SING N N 39 SCM N10 C1M SING N N 40 SCM N10 HN1 SING N N 41 SCM C1M H1M1 SING N N 42 SCM C1M H1M2 SING N N 43 SCM C1M H1M3 SING N N 44 SCM C11 O11 SING N N 45 SCM C11 C12 SING N N 46 SCM C11 H11 SING N N 47 SCM O11 HO1 SING N N 48 SCM C12 H12 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SCM SMILES ACDLabs 10.04 "O=C1C2(OC3C(NC)C(O)C(NC)C(O)C3OC2OC(C1)C)O" SCM SMILES_CANONICAL CACTVS 3.341 "CN[C@@H]1[C@H](O)[C@H](NC)[C@H]2O[C@]3(O)[C@@H](O[C@H](C)CC3=O)O[C@@H]2[C@H]1O" SCM SMILES CACTVS 3.341 "CN[CH]1[CH](O)[CH](NC)[CH]2O[C]3(O)[CH](O[CH](C)CC3=O)O[CH]2[CH]1O" SCM SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[C@@H]1CC(=O)[C@]2([C@@H](O1)O[C@@H]3[C@H]([C@@H]([C@@H]([C@@H]([C@H]3O2)NC)O)NC)O)O" SCM SMILES "OpenEye OEToolkits" 1.5.0 "CC1CC(=O)C2(C(O1)OC3C(C(C(C(C3O2)NC)O)NC)O)O" SCM InChI InChI 1.03 "InChI=1S/C14H24N2O7/c1-5-4-6(17)14(20)13(21-5)22-12-10(19)7(15-2)9(18)8(16-3)11(12)23-14/h5,7-13,15-16,18-20H,4H2,1-3H3/t5-,7-,8+,9+,10+,11-,12-,13+,14+/m1/s1" SCM InChIKey InChI 1.03 UNFWWIHTNXNPBV-WXKVUWSESA-N # _pdbx_chem_comp_identifier.comp_id SCM _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program ACDLabs _pdbx_chem_comp_identifier.program_version 10.04 _pdbx_chem_comp_identifier.identifier "(2R,4aR,5aR,6S,7S,8R,9S,9aR,10aS)-4a,7,9-trihydroxy-2-methyl-6,8-bis(methylamino)decahydro-4H-pyrano[2,3-b][1,4]benzodioxin-4-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SCM "Create component" 2000-08-25 RCSB SCM "Modify descriptor" 2011-06-04 RCSB SCM "Modify synonyms" 2020-05-27 PDBE # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 SCM ACTINOSPECTACIN ? ? 2 SCM ESPECTINOMICINA ? ? 3 SCM CHX-3101 ? ? #