data_SOO # _chem_comp.id SOO _chem_comp.name "S-[2-[3-[[(2S)-2-hydroxy-3,3-dimethyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] (E)-oct-2-enethioate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H35 N2 O8 P S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-10-15 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 482.529 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SOO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2KOS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SOO C1 C1 C 0 1 N N N -3.184 5.991 -3.444 -6.309 0.447 -0.087 C1 SOO 1 SOO O1 O1 O 0 1 N N N -2.108 6.523 -3.727 -6.012 0.519 1.090 O1 SOO 2 SOO S1 S1 S 0 1 N N N -4.705 6.642 -3.925 -5.083 0.023 -1.280 S1 SOO 3 SOO C2 C2 C 0 1 N N N -3.189 4.841 -2.539 -7.692 0.707 -0.515 C2 SOO 4 SOO C3 C3 C 0 1 N N N -2.067 4.475 -1.924 -8.618 1.021 0.386 C3 SOO 5 SOO C4 C4 C 0 1 N N N -2.064 3.380 -0.937 -10.035 1.287 -0.052 C4 SOO 6 SOO C5 C5 C 0 1 N N N -0.671 3.163 -0.396 -10.989 0.373 0.720 C5 SOO 7 SOO C6 C6 C 0 1 N N N -0.624 2.021 0.602 -12.427 0.644 0.275 C6 SOO 8 SOO C7 C7 C 0 1 N N N 0.787 1.804 1.136 -13.380 -0.270 1.048 C7 SOO 9 SOO C8 C8 C 0 1 N N N 1.728 1.429 0.009 -14.819 0.000 0.603 C8 SOO 10 SOO O23 O23 O 0 1 N N N -12.567 10.782 2.248 6.439 2.805 -1.054 O23 SOO 11 SOO P24 P24 P 0 1 N N N -11.982 10.171 1.034 7.560 2.435 -0.161 P24 SOO 12 SOO O26 O26 O 0 1 N N N -12.857 9.942 -0.148 7.901 3.670 0.813 O26 SOO 13 SOO O27 O27 O 0 1 N N N -10.771 11.085 0.572 7.141 1.155 0.722 O27 SOO 14 SOO C28 C28 C 0 1 N N N -9.762 11.456 1.585 6.681 -0.070 0.148 C28 SOO 15 SOO O28 O28 O 0 1 N N N -11.330 8.785 1.435 8.855 2.076 -1.046 O28 SOO 16 SOO C29 C29 C 0 1 N N N -8.530 12.111 0.952 6.372 -1.071 1.263 C29 SOO 17 SOO C30 C30 C 0 1 N N N -7.971 11.130 -0.072 7.640 -1.335 2.077 C30 SOO 18 SOO C31 C31 C 0 1 N N N -8.928 13.421 0.255 5.288 -0.497 2.178 C31 SOO 19 SOO C32 C32 C 0 1 N N S -7.471 12.422 2.106 5.878 -2.382 0.648 C32 SOO 20 SOO O33 O33 O 0 1 N N N -7.992 13.423 2.978 6.935 -2.984 -0.103 O33 SOO 21 SOO C34 C34 C 0 1 N N N -6.168 12.970 1.547 4.710 -2.102 -0.262 C34 SOO 22 SOO O35 O35 O 0 1 N N N -5.981 14.188 1.488 4.847 -2.180 -1.465 O35 SOO 23 SOO N36 N36 N 0 1 N N N -5.287 12.092 1.158 3.514 -1.766 0.260 N36 SOO 24 SOO C37 C37 C 0 1 N N N -3.992 12.426 0.608 2.352 -1.603 -0.617 C37 SOO 25 SOO C38 C38 C 0 1 N N N -3.312 11.240 -0.054 1.130 -1.223 0.221 C38 SOO 26 SOO C39 C39 C 0 1 N N N -3.927 10.819 -1.378 -0.066 -1.056 -0.680 C39 SOO 27 SOO O40 O40 O 0 1 N N N -4.784 11.501 -1.971 0.048 -1.225 -1.876 O40 SOO 28 SOO N41 N41 N 0 1 N N N -3.473 9.681 -1.810 -1.262 -0.720 -0.158 N41 SOO 29 SOO C42 C42 C 0 1 N N N -3.863 9.014 -3.015 -2.424 -0.557 -1.035 C42 SOO 30 SOO C43 C43 C 0 1 N N N -4.768 7.844 -2.693 -3.647 -0.177 -0.197 C43 SOO 31 SOO H2 H2 H 0 1 N N N -4.102 4.290 -2.370 -7.955 0.642 -1.560 H2 SOO 32 SOO H3 H3 H 0 1 N N N -1.144 4.988 -2.152 -8.355 1.085 1.431 H3 SOO 33 SOO H4 H4 H 0 1 N N N -2.737 3.640 -0.107 -10.288 2.328 0.148 H4 SOO 34 SOO H4A H4A H 0 1 N N N -2.411 2.456 -1.422 -10.129 1.090 -1.120 H4A SOO 35 SOO H5 H5 H 0 1 N N N -0.000 2.926 -1.235 -10.736 -0.668 0.520 H5 SOO 36 SOO H5A H5A H 0 1 N N N -0.341 4.084 0.107 -10.895 0.570 1.788 H5A SOO 37 SOO H6 H6 H 0 1 N N N -1.289 2.259 1.445 -12.680 1.685 0.476 H6 SOO 38 SOO H6A H6A H 0 1 N N N -0.960 1.100 0.103 -12.521 0.446 -0.792 H6A SOO 39 SOO H7 H7 H 0 1 N N N 1.141 2.733 1.608 -13.128 -1.312 0.848 H7 SOO 40 SOO H7A H7A H 0 1 N N N 0.771 0.992 1.878 -13.287 -0.073 2.116 H7A SOO 41 SOO H8 H8 H 0 1 N N N 2.740 1.276 0.411 -15.072 1.041 0.804 H8 SOO 42 SOO H8A H8A H 0 1 N N N 1.379 0.501 -0.467 -14.912 -0.197 -0.465 H8A SOO 43 SOO H8B H8B H 0 1 N N N 1.748 2.238 -0.736 -15.498 -0.651 1.154 H8B SOO 44 SOO HO26 HO26 H 0 0 N N N -13.738 10.240 0.047 8.161 4.477 0.348 HO26 SOO 45 SOO H28 H28 H 0 1 N N N -10.216 12.168 2.290 5.777 0.118 -0.432 H28 SOO 46 SOO H28A H28A H 0 0 N N N -9.444 10.546 2.115 7.453 -0.479 -0.504 H28A SOO 47 SOO HO28 HO28 H 0 0 N N N -11.450 8.636 2.366 9.630 1.823 -0.525 HO28 SOO 48 SOO H30 H30 H 0 1 N N N -7.081 11.566 -0.550 8.021 -0.393 2.472 H30 SOO 49 SOO H30A H30A H 0 0 N N N -7.694 10.192 0.432 7.408 -2.008 2.903 H30A SOO 50 SOO H30B H30B H 0 0 N N N -8.734 10.924 -0.837 8.394 -1.792 1.437 H30B SOO 51 SOO H31 H31 H 0 1 N N N -8.037 13.883 -0.196 4.431 -0.191 1.578 H31 SOO 52 SOO H31A H31A H 0 0 N N N -9.668 13.208 -0.531 4.977 -1.258 2.894 H31A SOO 53 SOO H31B H31B H 0 0 N N N -9.365 14.111 0.992 5.684 0.366 2.713 H31B SOO 54 SOO H32 H32 H 0 1 N N N -7.284 11.473 2.630 5.565 -3.061 1.442 H32 SOO 55 SOO HO33 HO33 H 0 0 N N N -7.501 14.229 2.865 7.263 -2.434 -0.828 HO33 SOO 56 SOO HN36 HN36 H 0 0 N N N -5.522 11.124 1.246 3.423 -1.631 1.216 HN36 SOO 57 SOO H37 H37 H 0 1 N N N -4.128 13.214 -0.147 2.552 -0.817 -1.344 H37 SOO 58 SOO H37A H37A H 0 0 N N N -3.349 12.783 1.426 2.157 -2.540 -1.139 H37A SOO 59 SOO H38 H38 H 0 1 N N N -2.264 11.515 -0.242 0.929 -2.010 0.949 H38 SOO 60 SOO H38A H38A H 0 0 N N N -3.379 10.385 0.635 1.325 -0.287 0.744 H38A SOO 61 SOO HN41 HN41 H 0 0 N N N -2.784 9.227 -1.246 -1.353 -0.585 0.798 HN41 SOO 62 SOO H42 H42 H 0 1 N N N -4.401 9.721 -3.663 -2.224 0.229 -1.763 H42 SOO 63 SOO H42A H42A H 0 0 N N N -2.965 8.646 -3.533 -2.619 -1.494 -1.557 H42A SOO 64 SOO H43 H43 H 0 1 N N N -5.802 8.209 -2.606 -3.452 0.760 0.326 H43 SOO 65 SOO H43A H43A H 0 0 N N N -4.444 7.395 -1.743 -3.847 -0.964 0.531 H43A SOO 66 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SOO C1 O1 DOUB N N 1 SOO C1 S1 SING N N 2 SOO C1 C2 SING N N 3 SOO S1 C43 SING N N 4 SOO C2 C3 DOUB N E 5 SOO C3 C4 SING N N 6 SOO C4 C5 SING N N 7 SOO C5 C6 SING N N 8 SOO C6 C7 SING N N 9 SOO C7 C8 SING N N 10 SOO O23 P24 DOUB N N 11 SOO P24 O26 SING N N 12 SOO P24 O27 SING N N 13 SOO P24 O28 SING N N 14 SOO O27 C28 SING N N 15 SOO C28 C29 SING N N 16 SOO C29 C30 SING N N 17 SOO C29 C31 SING N N 18 SOO C29 C32 SING N N 19 SOO C32 O33 SING N N 20 SOO C32 C34 SING N N 21 SOO C34 O35 DOUB N N 22 SOO C34 N36 SING N N 23 SOO N36 C37 SING N N 24 SOO C37 C38 SING N N 25 SOO C38 C39 SING N N 26 SOO C39 O40 DOUB N N 27 SOO C39 N41 SING N N 28 SOO N41 C42 SING N N 29 SOO C42 C43 SING N N 30 SOO C2 H2 SING N N 31 SOO C3 H3 SING N N 32 SOO C4 H4 SING N N 33 SOO C4 H4A SING N N 34 SOO C5 H5 SING N N 35 SOO C5 H5A SING N N 36 SOO C6 H6 SING N N 37 SOO C6 H6A SING N N 38 SOO C7 H7 SING N N 39 SOO C7 H7A SING N N 40 SOO C8 H8 SING N N 41 SOO C8 H8A SING N N 42 SOO C8 H8B SING N N 43 SOO O26 HO26 SING N N 44 SOO C28 H28 SING N N 45 SOO C28 H28A SING N N 46 SOO O28 HO28 SING N N 47 SOO C30 H30 SING N N 48 SOO C30 H30A SING N N 49 SOO C30 H30B SING N N 50 SOO C31 H31 SING N N 51 SOO C31 H31A SING N N 52 SOO C31 H31B SING N N 53 SOO C32 H32 SING N N 54 SOO O33 HO33 SING N N 55 SOO N36 HN36 SING N N 56 SOO C37 H37 SING N N 57 SOO C37 H37A SING N N 58 SOO C38 H38 SING N N 59 SOO C38 H38A SING N N 60 SOO N41 HN41 SING N N 61 SOO C42 H42 SING N N 62 SOO C42 H42A SING N N 63 SOO C43 H43 SING N N 64 SOO C43 H43A SING N N 65 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SOO SMILES ACDLabs 11.02 "O=C(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(O)O)/C=C/CCCCC" SOO SMILES_CANONICAL CACTVS 3.352 "CCCCC/C=C/C(=O)SCCNC(=O)CCNC(=O)[C@@H](O)C(C)(C)CO[P](O)(O)=O" SOO SMILES CACTVS 3.352 "CCCCCC=CC(=O)SCCNC(=O)CCNC(=O)[CH](O)C(C)(C)CO[P](O)(O)=O" SOO SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CCCCC/C=C/C(=O)SCCNC(=O)CCNC(=O)[C@H](C(C)(C)COP(=O)(O)O)O" SOO SMILES "OpenEye OEToolkits" 1.7.0 "CCCCCC=CC(=O)SCCNC(=O)CCNC(=O)C(C(C)(C)COP(=O)(O)O)O" SOO InChI InChI 1.03 "InChI=1S/C19H35N2O8PS/c1-4-5-6-7-8-9-16(23)31-13-12-20-15(22)10-11-21-18(25)17(24)19(2,3)14-29-30(26,27)28/h8-9,17,24H,4-7,10-14H2,1-3H3,(H,20,22)(H,21,25)(H2,26,27,28)/b9-8+/t17-/m1/s1" SOO InChIKey InChI 1.03 OTEZXIWUZIHTBI-KBOKABMXSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier SOO "SYSTEMATIC NAME" ACDLabs 11.02 "S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] (2E)-oct-2-enethioate" SOO "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "S-[2-[3-[[(2S)-2-hydroxy-3,3-dimethyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] (E)-oct-2-enethioate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SOO "Create component" 2009-10-15 PDBJ SOO "Modify descriptor" 2011-06-04 RCSB #