data_T20 # _chem_comp.id T20 _chem_comp.name "3-nitro-N-[1-phenyl-5-(piperidin-1-ylmethyl)-1H-benzimidazol-2-yl]benzamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H25 N5 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-10-24 _chem_comp.pdbx_modified_date 2016-03-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 455.508 _chem_comp.one_letter_code ? _chem_comp.three_letter_code T20 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4RMZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal T20 C1 C1 C 0 1 Y N N 36.524 159.389 -11.173 -0.537 -3.346 1.383 C1 T20 1 T20 C2 C2 C 0 1 Y N N 36.306 159.489 -12.556 -0.955 -4.626 1.690 C2 T20 2 T20 C3 C3 C 0 1 Y N N 36.953 158.598 -13.437 -0.846 -5.634 0.749 C3 T20 3 T20 C4 C4 C 0 1 Y N N 37.816 157.606 -12.928 -0.317 -5.364 -0.500 C4 T20 4 T20 C5 C5 C 0 1 Y N N 38.038 157.508 -11.602 0.102 -4.086 -0.812 C5 T20 5 T20 C6 C6 C 0 1 Y N N 37.374 158.446 -10.691 -0.007 -3.071 0.130 C6 T20 6 T20 C7 C7 C 0 1 Y N N 40.189 158.143 -8.965 2.931 -2.029 -0.508 C7 T20 7 T20 C8 C8 C 0 1 Y N N 38.783 158.210 -8.572 1.712 -1.371 -0.457 C8 T20 8 T20 C9 C9 C 0 1 Y N N 38.442 158.139 -7.196 1.647 0.009 -0.717 C9 T20 9 T20 C10 C10 C 0 1 Y N N 39.485 158.003 -6.217 2.818 0.705 -1.026 C10 T20 10 T20 C11 C11 C 0 1 Y N N 40.843 157.922 -6.598 4.020 0.035 -1.073 C11 T20 11 T20 C12 C12 C 0 1 Y N N 41.184 158.007 -8.027 4.078 -1.326 -0.815 C12 T20 12 T20 C13 C13 C 0 1 Y N N 31.583 157.914 -7.479 -4.575 -0.654 0.321 C13 T20 13 T20 C14 C14 C 0 1 Y N N 30.248 157.865 -7.884 -5.940 -0.631 0.518 C14 T20 14 T20 C15 C15 C 0 1 Y N N 29.912 158.214 -9.188 -6.640 0.557 0.395 C15 T20 15 T20 C16 C16 C 0 1 Y N N 30.900 158.582 -10.048 -5.976 1.728 0.074 C16 T20 16 T20 C17 C17 C 0 1 Y N N 32.266 158.636 -9.647 -4.611 1.718 -0.126 C17 T20 17 T20 C18 C18 C 0 1 Y N N 32.584 158.326 -8.350 -3.898 0.524 0.002 C18 T20 18 T20 N19 N19 N 0 1 Y N N 37.578 158.353 -9.252 0.413 -1.772 -0.186 N19 T20 19 T20 C20 C20 C 0 1 Y N N 36.516 158.390 -8.359 -0.382 -0.664 -0.285 C20 T20 20 T20 N21 N21 N 0 1 Y N N 37.014 158.237 -7.118 0.345 0.379 -0.596 N21 T20 21 T20 C22 C22 C 0 1 N N N 41.964 157.798 -5.538 5.283 0.787 -1.407 C22 T20 22 T20 N23 N23 N 0 1 N N N 35.109 158.470 -8.807 -1.751 -0.647 -0.086 N23 T20 23 T20 C24 C24 C 0 1 N N N 34.026 158.331 -7.863 -2.436 0.507 -0.210 C24 T20 24 T20 O25 O25 O 0 1 N N N 34.315 158.168 -6.628 -1.851 1.533 -0.497 O25 T20 25 T20 N26 N26 N 0 1 N N N 30.536 158.922 -11.405 -6.733 2.992 -0.062 N26 T20 26 T20 O27 O27 O 0 1 N N N 31.409 158.726 -12.365 -6.151 4.023 -0.349 O27 T20 27 T20 O28 O28 O 0 1 N N N 29.323 159.410 -11.684 -7.938 3.002 0.114 O28 T20 28 T20 C30 C30 C 0 1 N N N 43.175 156.572 -4.037 5.035 2.305 0.462 C30 T20 29 T20 C31 C31 C 0 1 N N N 43.409 155.272 -3.371 5.628 2.703 1.816 C31 T20 30 T20 C32 C32 C 0 1 N N N 44.094 154.318 -4.254 7.037 3.263 1.605 C32 T20 31 T20 C33 C33 C 0 1 N N N 43.472 154.235 -5.561 7.896 2.209 0.901 C33 T20 32 T20 C34 C34 C 0 1 N N N 43.205 155.558 -6.193 7.237 1.825 -0.426 C34 T20 33 T20 N35 N35 N 0 1 N N N 42.457 156.446 -5.294 5.892 1.295 -0.171 N35 T20 34 T20 H1 H1 H 0 1 N N N 36.018 160.060 -10.495 -0.627 -2.558 2.116 H1 T20 35 T20 H2 H2 H 0 1 N N N 35.643 160.248 -12.945 -1.368 -4.840 2.664 H2 T20 36 T20 H3 H3 H 0 1 N N N 36.787 158.675 -14.501 -1.173 -6.635 0.991 H3 T20 37 T20 H4 H4 H 0 1 N N N 38.303 156.920 -13.605 -0.233 -6.154 -1.232 H4 T20 38 T20 H5 H5 H 0 1 N N N 38.698 156.746 -11.214 0.515 -3.875 -1.788 H5 T20 39 T20 H6 H6 H 0 1 N N N 40.451 158.201 -10.011 2.983 -3.088 -0.304 H6 T20 40 T20 H7 H7 H 0 1 N N N 39.226 157.962 -5.169 2.780 1.765 -1.229 H7 T20 41 T20 H8 H8 H 0 1 N N N 42.217 157.962 -8.339 5.027 -1.840 -0.855 H8 T20 42 T20 H9 H9 H 0 1 N N N 31.842 157.627 -6.471 -4.030 -1.582 0.417 H9 T20 43 T20 H10 H10 H 0 1 N N N 29.480 157.558 -7.189 -6.464 -1.541 0.768 H10 T20 44 T20 H11 H11 H 0 1 N N N 28.882 158.193 -9.513 -7.708 0.570 0.550 H11 T20 45 T20 H12 H12 H 0 1 N N N 33.036 158.916 -10.351 -4.095 2.633 -0.377 H12 T20 46 T20 H13 H13 H 0 1 N N N 42.813 158.413 -5.871 5.982 0.118 -1.909 H13 T20 47 T20 H14 H14 H 0 1 N N N 41.576 158.193 -4.588 5.044 1.623 -2.065 H14 T20 48 T20 H15 H15 H 0 1 N N N 34.906 158.622 -9.774 -2.218 -1.466 0.143 H15 T20 49 T20 H16 H16 H 0 1 N N N 44.148 157.044 -4.235 4.036 1.893 0.610 H16 T20 50 T20 H17 H17 H 0 1 N N N 42.588 157.211 -3.361 4.973 3.183 -0.180 H17 T20 51 T20 H18 H18 H 0 1 N N N 42.440 154.846 -3.072 4.999 3.464 2.278 H18 T20 52 T20 H19 H19 H 0 1 N N N 44.029 155.437 -2.477 5.676 1.828 2.464 H19 T20 53 T20 H20 H20 H 0 1 N N N 44.069 153.323 -3.787 6.984 4.161 0.989 H20 T20 54 T20 H21 H21 H 0 1 N N N 45.139 154.639 -4.379 7.479 3.509 2.570 H21 T20 55 T20 H22 H22 H 0 1 N N N 42.515 153.703 -5.455 8.889 2.617 0.709 H22 T20 56 T20 H23 H23 H 0 1 N N N 44.137 153.663 -6.225 7.981 1.326 1.534 H23 T20 57 T20 H24 H24 H 0 1 N N N 44.164 156.033 -6.446 7.166 2.706 -1.064 H24 T20 58 T20 H25 H25 H 0 1 N N N 42.619 155.403 -7.111 7.839 1.064 -0.924 H25 T20 59 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal T20 C3 C4 DOUB Y N 1 T20 C3 C2 SING Y N 2 T20 C4 C5 SING Y N 3 T20 C2 C1 DOUB Y N 4 T20 O27 N26 DOUB N N 5 T20 O28 N26 DOUB N N 6 T20 C5 C6 DOUB Y N 7 T20 N26 C16 SING N N 8 T20 C1 C6 SING Y N 9 T20 C6 N19 SING N N 10 T20 C16 C17 DOUB Y N 11 T20 C16 C15 SING Y N 12 T20 C17 C18 SING Y N 13 T20 N19 C8 SING Y N 14 T20 N19 C20 SING Y N 15 T20 C15 C14 DOUB Y N 16 T20 C7 C8 DOUB Y N 17 T20 C7 C12 SING Y N 18 T20 N23 C20 SING N N 19 T20 N23 C24 SING N N 20 T20 C8 C9 SING Y N 21 T20 C20 N21 DOUB Y N 22 T20 C18 C24 SING N N 23 T20 C18 C13 DOUB Y N 24 T20 C12 C11 DOUB Y N 25 T20 C14 C13 SING Y N 26 T20 C24 O25 DOUB N N 27 T20 C9 N21 SING Y N 28 T20 C9 C10 DOUB Y N 29 T20 C11 C10 SING Y N 30 T20 C11 C22 SING N N 31 T20 C34 C33 SING N N 32 T20 C34 N35 SING N N 33 T20 C33 C32 SING N N 34 T20 C22 N35 SING N N 35 T20 N35 C30 SING N N 36 T20 C32 C31 SING N N 37 T20 C30 C31 SING N N 38 T20 C1 H1 SING N N 39 T20 C2 H2 SING N N 40 T20 C3 H3 SING N N 41 T20 C4 H4 SING N N 42 T20 C5 H5 SING N N 43 T20 C7 H6 SING N N 44 T20 C10 H7 SING N N 45 T20 C12 H8 SING N N 46 T20 C13 H9 SING N N 47 T20 C14 H10 SING N N 48 T20 C15 H11 SING N N 49 T20 C17 H12 SING N N 50 T20 C22 H13 SING N N 51 T20 C22 H14 SING N N 52 T20 N23 H15 SING N N 53 T20 C30 H16 SING N N 54 T20 C30 H17 SING N N 55 T20 C31 H18 SING N N 56 T20 C31 H19 SING N N 57 T20 C32 H20 SING N N 58 T20 C32 H21 SING N N 59 T20 C33 H22 SING N N 60 T20 C33 H23 SING N N 61 T20 C34 H24 SING N N 62 T20 C34 H25 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor T20 SMILES ACDLabs 12.01 "O=N(=O)c1cccc(c1)C(=O)Nc3nc4cc(ccc4n3c2ccccc2)CN5CCCCC5" T20 InChI InChI 1.03 "InChI=1S/C26H25N5O3/c32-25(20-8-7-11-22(17-20)31(33)34)28-26-27-23-16-19(18-29-14-5-2-6-15-29)12-13-24(23)30(26)21-9-3-1-4-10-21/h1,3-4,7-13,16-17H,2,5-6,14-15,18H2,(H,27,28,32)" T20 InChIKey InChI 1.03 IEOZVBDPTHRYGK-UHFFFAOYSA-N T20 SMILES_CANONICAL CACTVS 3.385 "O=C(Nc1nc2cc(CN3CCCCC3)ccc2n1c4ccccc4)c5cccc(c5)[N](=O)=O" T20 SMILES CACTVS 3.385 "O=C(Nc1nc2cc(CN3CCCCC3)ccc2n1c4ccccc4)c5cccc(c5)[N](=O)=O" T20 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)n2c3ccc(cc3nc2NC(=O)c4cccc(c4)N(=O)=O)CN5CCCCC5" T20 SMILES "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)n2c3ccc(cc3nc2NC(=O)c4cccc(c4)N(=O)=O)CN5CCCCC5" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier T20 "SYSTEMATIC NAME" ACDLabs 12.01 "3-nitro-N-[1-phenyl-5-(piperidin-1-ylmethyl)-1H-benzimidazol-2-yl]benzamide" T20 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "3-nitro-N-[1-phenyl-5-(piperidin-1-ylmethyl)benzimidazol-2-yl]benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site T20 "Create component" 2014-10-24 RCSB T20 "Initial release" 2016-03-23 RCSB #