data_T25 # _chem_comp.id T25 _chem_comp.name "(9Z)-11-[(2R,3S)-3-pentyloxiran-2-yl]undec-9-enoic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H32 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "12R,13S-epoxy-9(Z)-octadecenoic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2007-10-10 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 296.445 _chem_comp.one_letter_code ? _chem_comp.three_letter_code T25 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2RCL _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal T25 O1 O1 O 0 1 N N N -2.509 31.376 25.895 7.927 0.353 0.900 O1 T25 1 T25 C1 C1 C 0 1 N N N -1.304 31.748 25.816 7.581 1.261 0.181 C1 T25 2 T25 O2 O2 O 0 1 N N N -0.755 32.550 26.623 8.443 2.246 -0.118 O2 T25 3 T25 C2 C2 C 0 1 N N N -0.461 31.186 24.679 6.185 1.284 -0.385 C2 T25 4 T25 C3 C3 C 0 1 N N N 0.724 30.371 25.218 5.417 0.053 0.102 C3 T25 5 T25 C4 C4 C 0 1 N N N 0.323 29.188 26.109 3.999 0.076 -0.472 C4 T25 6 T25 C5 C5 C 0 1 N N N -0.899 28.424 25.571 3.231 -1.155 0.015 C5 T25 7 T25 C6 C6 C 0 1 N N N -1.085 27.083 26.274 1.814 -1.132 -0.560 C6 T25 8 T25 C7 C7 C 0 1 N N N -2.112 27.144 27.390 1.046 -2.362 -0.073 C7 T25 9 T25 C8 C8 C 0 1 N N N -1.499 26.500 28.626 -0.372 -2.339 -0.647 C8 T25 10 T25 C9 C9 C 0 1 N N N -2.394 26.781 29.826 -1.128 -3.551 -0.168 C9 T25 11 T25 C10 C10 C 0 1 N N N -1.666 26.997 31.153 -2.298 -3.410 0.405 C10 T25 12 T25 C11 C11 C 0 1 N N N -0.147 26.883 31.120 -2.964 -2.058 0.433 C11 T25 13 T25 C12 C12 C 0 1 N N R 0.373 27.036 32.554 -4.376 -2.174 -0.146 C12 T25 14 T25 O3 O3 O 0 1 N N N 1.053 25.865 33.023 -5.474 -1.842 0.706 O3 T25 15 T25 C13 C13 C 0 1 N N S 1.896 26.984 32.712 -5.184 -0.886 -0.317 C13 T25 16 T25 C14 C14 C 0 1 N N N 2.678 26.674 31.441 -4.526 0.430 0.103 C14 T25 17 T25 C15 C15 C 0 1 N N N 3.198 27.913 30.712 -5.444 1.598 -0.262 C15 T25 18 T25 C16 C16 C 0 1 N N N 2.964 27.724 29.194 -4.785 2.914 0.157 C16 T25 19 T25 C17 C17 C 0 1 N N N 4.078 26.888 28.580 -5.703 4.082 -0.208 C17 T25 20 T25 C18 C18 C 0 1 N N N 4.639 27.523 27.321 -5.045 5.398 0.212 C18 T25 21 T25 HO2 HO2 H 0 1 N N N -1.385 32.818 27.281 9.328 2.186 0.265 HO2 T25 22 T25 H21 1H2 H 0 1 N N N -0.075 32.021 24.075 5.672 2.186 -0.052 H21 T25 23 T25 H22 2H2 H 0 1 N N N -1.093 30.523 24.070 6.233 1.274 -1.474 H22 T25 24 T25 H31 1H3 H 0 1 N N N 1.280 29.972 24.357 5.929 -0.850 -0.231 H31 T25 25 T25 H32 2H3 H 0 1 N N N 1.320 31.052 25.843 5.368 0.062 1.191 H32 T25 26 T25 H41 1H4 H 0 1 N N N 1.172 28.491 26.162 3.487 0.979 -0.139 H41 T25 27 T25 H42 2H4 H 0 1 N N N 0.055 29.591 27.097 4.048 0.067 -1.561 H42 T25 28 T25 H51 1H5 H 0 1 N N N -1.798 29.036 25.736 3.743 -2.057 -0.318 H51 T25 29 T25 H52 2H5 H 0 1 N N N -0.738 28.230 24.500 3.183 -1.145 1.104 H52 T25 30 T25 H61 1H6 H 0 1 N N N -1.423 26.345 25.531 1.301 -0.229 -0.227 H61 T25 31 T25 H62 2H6 H 0 1 N N N -0.120 26.805 26.723 1.862 -1.141 -1.649 H62 T25 32 T25 H71 1H7 H 0 1 N N N -2.375 28.191 27.602 1.558 -3.265 -0.406 H71 T25 33 T25 H72 2H7 H 0 1 N N N -3.028 26.611 27.096 0.997 -2.353 1.016 H72 T25 34 T25 H81 1H8 H 0 1 N N N -1.415 25.414 28.474 -0.884 -1.436 -0.314 H81 T25 35 T25 H82 2H8 H 0 1 N N N -0.497 26.917 28.804 -0.323 -2.349 -1.736 H82 T25 36 T25 H9 H9 H 0 1 N N N -3.470 26.825 29.745 -0.706 -4.537 -0.296 H9 T25 37 T25 H10 H10 H 0 1 N N N -2.200 27.219 32.065 -2.784 -4.261 0.857 H10 T25 38 T25 H111 1H11 H 0 0 N N N 0.147 25.903 30.717 -3.021 -1.702 1.461 H111 T25 39 T25 H112 2H11 H 0 0 N N N 0.279 27.665 30.475 -2.384 -1.355 -0.164 H112 T25 40 T25 H12 H12 H 0 1 N N N -0.423 27.706 32.910 -4.523 -2.967 -0.879 H12 T25 41 T25 H13 H13 H 0 1 N N N 2.630 27.636 33.207 -5.869 -0.825 -1.163 H13 T25 42 T25 H141 1H14 H 0 0 N N N 2.010 26.132 30.755 -4.356 0.424 1.179 H141 T25 43 T25 H142 2H14 H 0 0 N N N 3.558 26.086 31.741 -3.573 0.540 -0.415 H142 T25 44 T25 H151 1H15 H 0 0 N N N 4.273 28.038 30.910 -5.614 1.604 -1.339 H151 T25 45 T25 H152 2H15 H 0 0 N N N 2.667 28.809 31.066 -6.397 1.487 0.256 H152 T25 46 T25 H161 1H16 H 0 0 N N N 2.944 28.710 28.707 -4.615 2.908 1.234 H161 T25 47 T25 H162 2H16 H 0 0 N N N 2.006 27.204 29.044 -3.833 3.025 -0.361 H162 T25 48 T25 H171 1H17 H 0 0 N N N 3.673 25.898 28.324 -5.873 4.088 -1.284 H171 T25 49 T25 H172 2H17 H 0 0 N N N 4.892 26.813 29.316 -6.656 3.972 0.310 H172 T25 50 T25 H181 1H18 H 0 0 N N N 4.775 28.602 27.483 -4.092 5.509 -0.306 H181 T25 51 T25 H182 2H18 H 0 0 N N N 5.609 27.064 27.080 -5.699 6.231 -0.048 H182 T25 52 T25 H183 3H18 H 0 0 N N N 3.940 27.363 26.487 -4.875 5.392 1.288 H183 T25 53 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal T25 C2 C3 SING N N 1 T25 C2 C1 SING N N 2 T25 C3 C4 SING N N 3 T25 C5 C4 SING N N 4 T25 C5 C6 SING N N 5 T25 C1 O1 DOUB N N 6 T25 C1 O2 SING N N 7 T25 C6 C7 SING N N 8 T25 C18 C17 SING N N 9 T25 C7 C8 SING N N 10 T25 C17 C16 SING N N 11 T25 C8 C9 SING N N 12 T25 C16 C15 SING N N 13 T25 C9 C10 DOUB N N 14 T25 C15 C14 SING N N 15 T25 C11 C10 SING N N 16 T25 C11 C12 SING N N 17 T25 C14 C13 SING N N 18 T25 C12 C13 SING N N 19 T25 C12 O3 SING N N 20 T25 C13 O3 SING N N 21 T25 O2 HO2 SING N N 22 T25 C2 H21 SING N N 23 T25 C2 H22 SING N N 24 T25 C3 H31 SING N N 25 T25 C3 H32 SING N Z 26 T25 C4 H41 SING N N 27 T25 C4 H42 SING N N 28 T25 C5 H51 SING N N 29 T25 C5 H52 SING N N 30 T25 C6 H61 SING N N 31 T25 C6 H62 SING N N 32 T25 C7 H71 SING N N 33 T25 C7 H72 SING N N 34 T25 C8 H81 SING N N 35 T25 C8 H82 SING N N 36 T25 C9 H9 SING N N 37 T25 C10 H10 SING N N 38 T25 C11 H111 SING N N 39 T25 C11 H112 SING N N 40 T25 C12 H12 SING N N 41 T25 C13 H13 SING N N 42 T25 C14 H141 SING N N 43 T25 C14 H142 SING N N 44 T25 C15 H151 SING N N 45 T25 C15 H152 SING N N 46 T25 C16 H161 SING N N 47 T25 C16 H162 SING N N 48 T25 C17 H171 SING N N 49 T25 C17 H172 SING N N 50 T25 C18 H181 SING N N 51 T25 C18 H182 SING N N 52 T25 C18 H183 SING N N 53 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor T25 SMILES ACDLabs 10.04 "O=C(O)CCCCCCC/C=C\CC1OC1CCCCC" T25 SMILES_CANONICAL CACTVS 3.341 "CCCCC[C@@H]1O[C@@H]1C\C=C/CCCCCCCC(O)=O" T25 SMILES CACTVS 3.341 "CCCCC[CH]1O[CH]1CC=CCCCCCCCC(O)=O" T25 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CCCCC[C@H]1[C@H](O1)C\C=C/CCCCCCCC(=O)O" T25 SMILES "OpenEye OEToolkits" 1.5.0 "CCCCCC1C(O1)CC=CCCCCCCCC(=O)O" T25 InChI InChI 1.03 "InChI=1S/C18H32O3/c1-2-3-10-13-16-17(21-16)14-11-8-6-4-5-7-9-12-15-18(19)20/h8,11,16-17H,2-7,9-10,12-15H2,1H3,(H,19,20)/b11-8-/t16-,17+/m0/s1" T25 InChIKey InChI 1.03 CCPPLLJZDQAOHD-BEBBCNLGSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier T25 "SYSTEMATIC NAME" ACDLabs 10.04 "(9Z)-11-[(2R,3S)-3-pentyloxiran-2-yl]undec-9-enoic acid" T25 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(Z)-11-[(2R,3S)-3-pentyloxiran-2-yl]undec-9-enoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site T25 "Create component" 2007-10-10 EBI T25 "Modify descriptor" 2011-06-04 RCSB T25 "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id T25 _pdbx_chem_comp_synonyms.name "12R,13S-epoxy-9(Z)-octadecenoic acid" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##