data_TGK # _chem_comp.id TGK _chem_comp.name 1-deoxy-beta-L-tagatopyranose _chem_comp.type "L-saccharide, beta linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H12 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "1-deoxy-beta-L-tagatose; 1-deoxy-L-tagatose; 1-deoxy-tagatose" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-03-27 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 164.156 _chem_comp.one_letter_code ? _chem_comp.three_letter_code TGK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4YTR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 TGK 1-deoxy-beta-L-tagatose PDB ? 2 TGK 1-deoxy-L-tagatose PDB ? 3 TGK 1-deoxy-tagatose PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal TGK C2 C2 C 0 1 N N S 10.565 -10.340 17.292 -1.414 0.155 -0.168 C2 TGK 1 TGK O2 O2 O 0 1 N Y N 11.575 -11.079 16.622 -2.709 -0.290 0.240 O2 TGK 2 TGK C6 C6 C 0 1 N N N 8.904 -8.596 16.812 0.355 1.660 0.431 C6 TGK 3 TGK C5 C5 C 0 1 N N S 7.763 -9.550 17.184 1.387 0.529 0.418 C5 TGK 4 TGK C4 C4 C 0 1 N N R 8.252 -10.509 18.271 0.946 -0.542 -0.585 C4 TGK 5 TGK C1 C1 C 0 1 N N N 11.188 -9.595 18.464 -1.505 0.781 -1.561 C1 TGK 6 TGK C3 C3 C 0 1 N N R 9.440 -11.297 17.716 -0.453 -1.036 -0.205 C3 TGK 7 TGK O3 O3 O 0 1 N N N 9.014 -12.055 16.592 -0.408 -1.654 1.082 O3 TGK 8 TGK O4 O4 O 0 1 N N N 7.211 -11.404 18.645 1.865 -1.636 -0.551 O4 TGK 9 TGK O5 O5 O 0 1 N N N 6.642 -8.811 17.647 2.661 1.049 0.032 O5 TGK 10 TGK O6 O6 O 0 1 N N N 10.056 -9.349 16.359 -0.929 1.127 0.761 O6 TGK 11 TGK HO2 H1 H 0 1 N Y N 11.928 -11.737 17.209 -3.371 0.414 0.286 HO2 TGK 12 TGK H61 H2 H 0 1 N N N 9.183 -8.001 17.694 0.641 2.404 1.173 H61 TGK 13 TGK H62 H3 H 0 1 N N N 8.569 -7.925 16.008 0.313 2.125 -0.554 H62 TGK 14 TGK H5 H4 H 0 1 N N N 7.490 -10.136 16.294 1.459 0.090 1.413 H5 TGK 15 TGK H4 H5 H 0 1 N N N 8.586 -9.924 19.140 0.924 -0.116 -1.588 H4 TGK 16 TGK H11 H6 H 0 1 N N N 11.584 -10.319 19.191 -1.873 0.039 -2.270 H11 TGK 17 TGK H12 H7 H 0 1 N N N 12.006 -8.957 18.099 -2.189 1.629 -1.535 H12 TGK 18 TGK H8 H8 H 0 1 N N N 10.424 -8.970 18.949 -0.517 1.121 -1.872 H8 TGK 19 TGK H3 H9 H 0 1 N N N 9.822 -11.964 18.503 -0.797 -1.759 -0.945 H3 TGK 20 TGK HO3 H10 H 0 1 N Y N 8.318 -12.647 16.854 0.183 -2.418 1.132 HO3 TGK 21 TGK HO4 H11 H 0 1 N Y N 7.527 -11.994 19.320 2.774 -1.393 -0.774 HO4 TGK 22 TGK HO5 H12 H 0 1 N N N 5.940 -9.409 17.875 2.999 1.737 0.621 HO5 TGK 23 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal TGK O6 C6 SING N N 1 TGK O6 C2 SING N N 2 TGK O3 C3 SING N N 3 TGK O2 C2 SING N N 4 TGK C6 C5 SING N N 5 TGK C5 O5 SING N N 6 TGK C5 C4 SING N N 7 TGK C2 C3 SING N N 8 TGK C2 C1 SING N N 9 TGK C3 C4 SING N N 10 TGK C4 O4 SING N N 11 TGK O2 HO2 SING N N 12 TGK C6 H61 SING N N 13 TGK C6 H62 SING N N 14 TGK C5 H5 SING N N 15 TGK C4 H4 SING N N 16 TGK C1 H11 SING N N 17 TGK C1 H12 SING N N 18 TGK C1 H8 SING N N 19 TGK C3 H3 SING N N 20 TGK O3 HO3 SING N N 21 TGK O4 HO4 SING N N 22 TGK O5 HO5 SING N N 23 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor TGK SMILES ACDLabs 12.01 "C1(C(C(C(CO1)O)O)O)(C)O" TGK InChI InChI 1.03 "InChI=1S/C6H12O5/c1-6(10)5(9)4(8)3(7)2-11-6/h3-5,7-10H,2H2,1H3/t3-,4+,5+,6-/m0/s1" TGK InChIKey InChI 1.03 YLWWLYACYNLGLT-KCDKBNATSA-N TGK SMILES_CANONICAL CACTVS 3.385 "C[C@]1(O)OC[C@H](O)[C@@H](O)[C@H]1O" TGK SMILES CACTVS 3.385 "C[C]1(O)OC[CH](O)[CH](O)[CH]1O" TGK SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "C[C@]1([C@@H]([C@@H]([C@H](CO1)O)O)O)O" TGK SMILES "OpenEye OEToolkits" 1.9.2 "CC1(C(C(C(CO1)O)O)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier TGK "SYSTEMATIC NAME" ACDLabs 12.01 1-deoxy-beta-L-tagatopyranose TGK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(2S,3R,4R,5S)-2-methyloxane-2,3,4,5-tetrol" TGK "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 b-L-1-deoxy-Tagp # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support TGK "CARBOHYDRATE ISOMER" L PDB ? TGK "CARBOHYDRATE RING" pyranose PDB ? TGK "CARBOHYDRATE ANOMER" beta PDB ? TGK "CARBOHYDRATE PRIMARY CARBONYL GROUP" ketose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site TGK "Create component" 2015-03-27 PDBJ TGK "Initial release" 2016-03-23 RCSB TGK "Other modification" 2020-07-03 RCSB TGK "Modify synonyms" 2020-07-17 RCSB TGK "Modify linking type" 2020-07-17 RCSB TGK "Modify atom id" 2020-07-17 RCSB TGK "Modify component atom id" 2020-07-17 RCSB TGK "Modify leaving atom flag" 2020-07-17 RCSB ##