data_THV # _chem_comp.id THV _chem_comp.name "C2-1-HYDROXY-3-METHYL-PROPYL-THIAMIN DIPHOSPHATE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H26 N4 O8 P2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2004-11-30 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 496.412 _chem_comp.one_letter_code ? _chem_comp.three_letter_code THV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal THV O2B O2B O 0 1 N N N 70.453 4.999 4.489 8.437 0.610 -0.378 O2B THV 1 THV PB PB P 0 1 N N N 69.101 5.238 5.253 6.968 0.426 0.257 PB THV 2 THV O3B O3B O 0 1 N N N 68.070 4.161 4.777 6.697 1.596 1.329 O3B THV 3 THV O1B O1B O 0 1 N N N 68.529 6.593 5.087 6.883 -0.889 0.930 O1B THV 4 THV O3A O3A O 0 1 N N N 69.366 4.993 6.790 5.865 0.503 -0.913 O3A THV 5 THV PA PA P 0 1 N N R 69.148 3.602 7.745 4.494 -0.075 -0.298 PA THV 6 THV O1A O1A O 0 1 N N N 69.499 4.021 9.095 4.588 -1.678 -0.188 O1A THV 7 THV O2A O2A O 0 1 N N N 67.818 3.125 7.447 4.276 0.500 1.049 O2A THV 8 THV O5G O5G O 0 1 N N N 70.258 2.652 7.174 3.264 0.326 -1.257 O5G THV 9 THV C5B C5B C 0 1 N N N 71.612 2.851 7.567 2.071 -0.109 -0.602 C5B THV 10 THV C5A C5A C 0 1 N N N 72.413 2.104 6.505 0.858 0.243 -1.466 C5A THV 11 THV C5 C5 C 0 1 Y N N 73.911 2.289 6.681 -0.400 -0.215 -0.776 C5 THV 12 THV C4 C4 C 0 1 Y N N 74.921 1.450 7.205 -1.170 0.450 0.083 C4 THV 13 THV C4A C4A C 0 1 N N N 74.645 0.027 7.809 -0.809 1.859 0.477 C4A THV 14 THV S1 S1 S 0 1 Y N N 74.697 3.717 6.112 -1.237 -1.787 -0.903 S1 THV 15 THV C2 C2 C 0 1 Y N N 76.300 3.238 6.527 -2.583 -1.443 0.220 C2 THV 16 THV C8 C8 C -1 1 N N N 77.583 4.067 6.312 -3.602 -2.227 0.588 C8 THV 17 THV O9 O9 O 0 1 N N N 78.700 3.604 6.678 -3.932 -2.343 1.904 O9 THV 18 THV C9 C9 C 0 1 N N N 77.452 5.475 5.623 -4.386 -2.983 -0.455 C9 THV 19 THV C10 C10 C 0 1 N N N 77.496 6.607 6.662 -3.449 -3.926 -1.213 C10 THV 20 THV C11 C11 C 0 1 N N N 78.496 5.717 4.525 -5.487 -3.798 0.227 C11 THV 21 THV N3 N3 N 1 1 Y N N 76.200 1.991 7.115 -2.289 -0.137 0.606 N3 THV 22 THV C35 C35 C 0 1 N N N 77.394 1.317 7.691 -3.146 0.581 1.552 C35 THV 23 THV "C5'" C5* C 0 1 Y N N 77.411 1.547 9.252 -4.107 1.459 0.793 "C5'" THV 24 THV "C6'" C6* C 0 1 Y N N 77.279 0.427 10.125 -3.776 2.761 0.476 "C6'" THV 25 THV "N1'" N1* N 0 1 Y N N 77.312 0.504 11.454 -4.647 3.505 -0.193 "N1'" THV 26 THV "C2'" C2* C 0 1 Y N N 77.450 1.698 12.100 -5.817 3.019 -0.556 "C2'" THV 27 THV C2A C2A C 0 1 N N N 77.474 1.884 13.635 -6.773 3.903 -1.315 C2A THV 28 THV "N3'" N3* N 0 1 Y N N 77.579 2.851 11.327 -6.173 1.783 -0.275 "N3'" THV 29 THV "C4'" C4* C 0 1 Y N N 77.603 2.803 9.914 -5.352 0.974 0.388 "C4'" THV 30 THV "N4'" N4* N 0 1 N N N 77.683 3.991 9.298 -5.731 -0.326 0.682 "N4'" THV 31 THV H2B H2B H 0 1 N N N 70.285 4.951 3.555 9.066 0.557 0.355 H2B THV 32 THV H3B H3B H 0 1 N N N 67.861 4.305 3.861 6.762 2.434 0.850 H3B THV 33 THV H1A H1A H 0 1 N N N 69.575 3.257 9.654 4.730 -2.012 -1.085 H1A THV 34 THV H5B1 1H5B H 0 0 N N N 71.815 2.486 8.585 1.985 0.388 0.364 H5B1 THV 35 THV H5B2 2H5B H 0 0 N N N 71.871 3.920 7.587 2.110 -1.188 -0.454 H5B2 THV 36 THV H5A1 1H5A H 0 0 N N N 72.134 2.510 5.521 0.944 -0.253 -2.433 H5A1 THV 37 THV H5A2 2H5A H 0 0 N N N 72.181 1.031 6.581 0.819 1.323 -1.614 H5A2 THV 38 THV H4A1 1H4A H 0 0 N N N 73.696 0.043 8.365 -1.283 2.561 -0.210 H4A1 THV 39 THV H4A2 2H4A H 0 0 N N N 75.465 -0.248 8.489 -1.158 2.053 1.491 H4A2 THV 40 THV H4A3 3H4A H 0 0 N N N 74.580 -0.711 6.996 0.273 1.983 0.434 H4A3 THV 41 THV H9 H9 H 0 1 N N N 79.259 3.488 5.919 -3.268 -1.848 2.403 H9 THV 42 THV HA HA H 0 1 N N N 76.469 5.476 5.129 -4.835 -2.277 -1.153 HA THV 43 THV H101 1H10 H 0 0 N N N 76.609 7.246 6.545 -3.000 -4.631 -0.514 H101 THV 44 THV H102 2H10 H 0 0 N N N 78.404 7.209 6.510 -4.016 -4.472 -1.967 H102 THV 45 THV H103 3H10 H 0 0 N N N 77.507 6.176 7.674 -2.665 -3.345 -1.698 H103 THV 46 THV H111 1H11 H 0 0 N N N 79.219 4.888 4.517 -5.038 -4.503 0.926 H111 THV 47 THV H112 2H11 H 0 0 N N N 79.024 6.662 4.723 -6.155 -3.126 0.767 H112 THV 48 THV H113 3H11 H 0 0 N N N 77.994 5.775 3.548 -6.054 -4.344 -0.527 H113 THV 49 THV H351 1H35 H 0 0 N N N 78.308 1.735 7.244 -3.706 -0.137 2.152 H351 THV 50 THV H352 2H35 H 0 0 N N N 77.349 0.239 7.477 -2.529 1.197 2.205 H352 THV 51 THV "H6'" H6* H 0 1 N N N 77.143 -0.547 9.679 -2.821 3.170 0.769 "H6'" THV 52 THV H2A1 1H2A H 0 0 N N N 76.581 2.444 13.950 -6.595 3.796 -2.385 H2A1 THV 53 THV H2A2 2H2A H 0 0 N N N 78.378 2.441 13.923 -7.798 3.611 -1.086 H2A2 THV 54 THV H2A3 3H2A H 0 0 N N N 77.480 0.899 14.124 -6.617 4.942 -1.023 H2A3 THV 55 THV "H4'1" 1H4* H 0 0 N N N 78.518 4.026 8.749 -6.471 -0.735 0.207 "H4'1" THV 56 THV "H4'2" 2H4* H 0 0 N N N 77.703 4.721 9.981 -5.255 -0.828 1.363 "H4'2" THV 57 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal THV O2B PB SING N N 1 THV O2B H2B SING N N 2 THV PB O3B SING N N 3 THV PB O1B DOUB N N 4 THV PB O3A SING N N 5 THV O3B H3B SING N N 6 THV O3A PA SING N N 7 THV PA O1A SING N N 8 THV PA O2A DOUB N N 9 THV PA O5G SING N N 10 THV O1A H1A SING N N 11 THV O5G C5B SING N N 12 THV C5B C5A SING N N 13 THV C5B H5B1 SING N N 14 THV C5B H5B2 SING N N 15 THV C5A C5 SING N N 16 THV C5A H5A1 SING N N 17 THV C5A H5A2 SING N N 18 THV C5 C4 DOUB Y N 19 THV C5 S1 SING Y N 20 THV C4 C4A SING N N 21 THV C4 N3 SING Y N 22 THV C4A H4A1 SING N N 23 THV C4A H4A2 SING N N 24 THV C4A H4A3 SING N N 25 THV S1 C2 SING Y N 26 THV C2 C8 SING N N 27 THV C2 N3 DOUB Y N 28 THV C8 O9 SING N N 29 THV C8 C9 SING N N 30 THV O9 H9 SING N N 31 THV C9 C10 SING N N 32 THV C9 C11 SING N N 33 THV C9 HA SING N N 34 THV C10 H101 SING N N 35 THV C10 H102 SING N N 36 THV C10 H103 SING N N 37 THV C11 H111 SING N N 38 THV C11 H112 SING N N 39 THV C11 H113 SING N N 40 THV N3 C35 SING N N 41 THV C35 "C5'" SING N N 42 THV C35 H351 SING N N 43 THV C35 H352 SING N N 44 THV "C5'" "C6'" DOUB Y N 45 THV "C5'" "C4'" SING Y N 46 THV "C6'" "N1'" SING Y N 47 THV "C6'" "H6'" SING N N 48 THV "N1'" "C2'" DOUB Y N 49 THV "C2'" C2A SING N N 50 THV "C2'" "N3'" SING Y N 51 THV C2A H2A1 SING N N 52 THV C2A H2A2 SING N N 53 THV C2A H2A3 SING N N 54 THV "N3'" "C4'" DOUB Y N 55 THV "C4'" "N4'" SING N N 56 THV "N4'" "H4'1" SING N N 57 THV "N4'" "H4'2" SING N N 58 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor THV SMILES ACDLabs 10.04 "O=P(O)(O)OP(=O)(O)OCCc1sc([C-](O)C(C)C)[n+](c1C)Cc2cnc(nc2N)C" THV SMILES_CANONICAL CACTVS 3.341 "CC(C)[C-](O)c1sc(CCO[P@](O)(=O)O[P](O)(O)=O)c(C)[n+]1Cc2cnc(C)nc2N" THV SMILES CACTVS 3.341 "CC(C)[C-](O)c1sc(CCO[P](O)(=O)O[P](O)(O)=O)c(C)[n+]1Cc2cnc(C)nc2N" THV SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "Cc1c(sc([n+]1Cc2cnc(nc2N)C)[C-](C(C)C)O)CCO[P@@](=O)(O)OP(=O)(O)O" THV SMILES "OpenEye OEToolkits" 1.5.0 "Cc1c(sc([n+]1Cc2cnc(nc2N)C)[C-](C(C)C)O)CCOP(=O)(O)OP(=O)(O)O" THV InChI InChI 1.03 "InChI=1S/C16H26N4O8P2S/c1-9(2)14(21)16-20(8-12-7-18-11(4)19-15(12)17)10(3)13(31-16)5-6-27-30(25,26)28-29(22,23)24/h7,9,21H,5-6,8H2,1-4H3,(H,25,26)(H2,17,18,19)(H2,22,23,24)" THV InChIKey InChI 1.03 VBABUKBBNKNHAI-UHFFFAOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier THV "SYSTEMATIC NAME" ACDLabs 10.04 "1-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium-2-yl}-1-hydroxy-2-methylpropan-1-ide" THV "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-[3-[(4-amino-2-methyl-pyrimidin-5-yl)methyl]-2-(1-hydroxy-2-methyl-propyl)-4-methyl-1,3-thiazol-3-ium-5-yl]ethyl phosphono hydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site THV "Create component" 2004-11-30 EBI THV "Modify descriptor" 2011-06-04 RCSB #