data_TLX # _chem_comp.id TLX _chem_comp.name "N1-(2-AMINO-4-METHYLPENTYL)OCTAHYDRO-PYRROLO[1,2-A] PYRIMIDINE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H27 N3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 225.374 _chem_comp.one_letter_code ? _chem_comp.three_letter_code TLX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1EFR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal TLX N1 N1 N 0 1 N N N N N N 103.231 98.979 76.402 0.189 -0.247 -0.702 N1 TLX 1 TLX C2 C2 C 0 1 N N N N N N 104.439 98.598 76.832 1.568 0.275 -0.739 C2 TLX 2 TLX C3 C3 C 0 1 N N N N N N 104.436 97.161 77.324 2.294 -0.190 -2.001 C3 TLX 3 TLX C4 C4 C 0 1 N N N N N N 103.238 96.910 78.234 1.467 0.137 -3.254 C4 TLX 4 TLX N5 N5 N 0 1 N N N N N N 102.134 97.418 77.701 0.150 -0.467 -3.077 N5 TLX 5 TLX C6 C6 C 0 1 N N N N N N 100.965 96.835 77.913 -0.745 -0.164 -4.199 C6 TLX 6 TLX C7 C7 C 0 1 N N N N N N 100.033 97.425 76.864 -2.151 0.029 -3.582 C7 TLX 7 TLX C8 C8 C 0 1 N N N N N N 100.787 98.548 76.118 -1.933 -0.077 -2.047 C8 TLX 8 TLX C9 C9 C 0 1 N N R N N N 102.189 98.117 76.566 -0.437 0.252 -1.917 C9 TLX 9 TLX "C1'" "C1'" C 0 1 N N N N N N 103.216 99.883 75.403 -0.482 0.415 0.423 "C1'" TLX 10 TLX "C2'" "C2'" C 0 1 N N S N N N 104.137 99.433 74.256 0.132 -0.065 1.738 "C2'" TLX 11 TLX "C3'" "C3'" C 0 1 N N N N N N 104.442 100.460 73.144 -0.679 0.484 2.912 "C3'" TLX 12 TLX "C4'" "C4'" C 0 1 N N N N N N 105.943 100.658 72.841 -0.064 0.004 4.228 "C4'" TLX 13 TLX "C5'" "C5'" C 0 1 N N N N N N 106.911 99.837 73.713 -0.877 0.553 5.402 "C5'" TLX 14 TLX "CM'" "CM'" C 0 1 N N N N N N 106.355 100.796 71.399 -0.079 -1.525 4.269 "CM'" TLX 15 TLX "N'" "N'" N 0 1 N N N Y Y N 103.776 98.200 73.858 1.518 0.413 1.835 "N'" TLX 16 TLX H21 1H2 H 0 1 N N N N N N 105.217 98.757 76.049 1.539 1.364 -0.725 H21 TLX 17 TLX H22 2H2 H 0 1 N N N N N N 104.830 99.292 77.611 2.109 -0.079 0.137 H22 TLX 18 TLX H31 1H3 H 0 1 N N N N N N 104.474 96.433 76.479 3.259 0.311 -2.066 H31 TLX 19 TLX H32 2H3 H 0 1 N N N N N N 105.397 96.890 77.820 2.453 -1.267 -1.947 H32 TLX 20 TLX H41 1H4 H 0 1 N N N N N N 103.121 95.827 78.476 1.367 1.217 -3.360 H41 TLX 21 TLX H42 2H4 H 0 1 N N N N N N 103.414 97.293 79.266 1.951 -0.279 -4.137 H42 TLX 22 TLX H61 1H6 H 0 1 N N N N N N 101.007 95.720 77.903 -0.425 0.750 -4.699 H61 TLX 23 TLX H62 2H6 H 0 1 N N N N N N 100.591 96.939 78.958 -0.756 -0.994 -4.906 H62 TLX 24 TLX H71 1H7 H 0 1 N N N N N N 99.621 96.652 76.173 -2.547 1.011 -3.841 H71 TLX 25 TLX H72 2H7 H 0 1 N N N N N N 99.065 97.772 77.296 -2.826 -0.754 -3.924 H72 TLX 26 TLX H81 1H8 H 0 1 N N N N N N 100.604 98.652 75.023 -2.541 0.654 -1.515 H81 TLX 27 TLX H82 2H8 H 0 1 N N N N N N 100.480 99.600 76.323 -2.141 -1.086 -1.693 H82 TLX 28 TLX H9 H9 H 0 1 N N N N N N 102.533 97.412 75.773 -0.278 1.326 -2.018 H9 TLX 29 TLX "H1'1" "1H1'" H 0 0 N N N N N N 102.180 100.089 75.046 -1.544 0.169 0.407 "H1'1" TLX 30 TLX "H1'2" "2H1'" H 0 0 N N N N N N 103.474 100.905 75.765 -0.358 1.494 0.336 "H1'2" TLX 31 TLX "H2'" "H2'" H 0 1 N N N N N N 105.169 99.369 74.672 0.122 -1.154 1.768 "H2'" TLX 32 TLX "H3'1" "1H3'" H 0 0 N N N N N N 103.891 100.195 72.211 -1.707 0.129 2.841 "H3'1" TLX 33 TLX "H3'2" "2H3'" H 0 0 N N N N N N 103.962 101.438 73.379 -0.669 1.574 2.883 "H3'2" TLX 34 TLX "H4'" "H4'" H 0 1 N N N N N N 106.071 101.705 73.199 0.963 0.359 4.300 "H4'" TLX 35 TLX "H5'1" "1H5'" H 0 0 N N N N N N 107.994 99.980 73.494 -0.438 0.211 6.339 "H5'1" TLX 36 TLX "H5'2" "2H5'" H 0 0 N N N N N N 106.711 100.032 74.792 -0.866 1.643 5.372 "H5'2" TLX 37 TLX "H5'3" "3H5'" H 0 0 N N N N N N 106.650 98.754 73.656 -1.904 0.198 5.330 "H5'3" TLX 38 TLX "HM'1" "1HM'" H 0 0 N N N N N N 107.438 100.939 71.180 -1.107 -1.880 4.198 "HM'1" TLX 39 TLX "HM'2" "2HM'" H 0 0 N N N N N N 105.977 99.918 70.823 0.499 -1.917 3.433 "HM'2" TLX 40 TLX "HM'3" "3HM'" H 0 0 N N N N N N 105.773 101.622 70.928 0.359 -1.867 5.207 "HM'3" TLX 41 TLX "HN'1" "1HN'" H 0 0 N N N Y Y N 104.386 97.901 73.097 1.472 1.418 1.914 "HN'1" TLX 42 TLX "HN'2" "2HN'" H 0 0 N Y N Y Y N 102.789 98.147 73.605 1.883 0.069 2.710 "HN'2" TLX 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal TLX N1 C2 SING N N 1 TLX N1 C9 SING N N 2 TLX N1 "C1'" SING N N 3 TLX C2 C3 SING N N 4 TLX C2 H21 SING N N 5 TLX C2 H22 SING N N 6 TLX C3 C4 SING N N 7 TLX C3 H31 SING N N 8 TLX C3 H32 SING N N 9 TLX C4 N5 SING N N 10 TLX C4 H41 SING N N 11 TLX C4 H42 SING N N 12 TLX N5 C6 SING N N 13 TLX N5 C9 SING N N 14 TLX C6 C7 SING N N 15 TLX C6 H61 SING N N 16 TLX C6 H62 SING N N 17 TLX C7 C8 SING N N 18 TLX C7 H71 SING N N 19 TLX C7 H72 SING N N 20 TLX C8 C9 SING N N 21 TLX C8 H81 SING N N 22 TLX C8 H82 SING N N 23 TLX C9 H9 SING N N 24 TLX "C1'" "C2'" SING N N 25 TLX "C1'" "H1'1" SING N N 26 TLX "C1'" "H1'2" SING N N 27 TLX "C2'" "C3'" SING N N 28 TLX "C2'" "N'" SING N N 29 TLX "C2'" "H2'" SING N N 30 TLX "C3'" "C4'" SING N N 31 TLX "C3'" "H3'1" SING N N 32 TLX "C3'" "H3'2" SING N N 33 TLX "C4'" "C5'" SING N N 34 TLX "C4'" "CM'" SING N N 35 TLX "C4'" "H4'" SING N N 36 TLX "C5'" "H5'1" SING N N 37 TLX "C5'" "H5'2" SING N N 38 TLX "C5'" "H5'3" SING N N 39 TLX "CM'" "HM'1" SING N N 40 TLX "CM'" "HM'2" SING N N 41 TLX "CM'" "HM'3" SING N N 42 TLX "N'" "HN'1" SING N N 43 TLX "N'" "HN'2" SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor TLX SMILES ACDLabs 10.04 "N21CCCC1N(CCC2)CC(N)CC(C)C" TLX SMILES_CANONICAL CACTVS 3.341 "CC(C)C[C@H](N)CN1CCCN2CCC[C@@H]12" TLX SMILES CACTVS 3.341 "CC(C)C[CH](N)CN1CCCN2CCC[CH]12" TLX SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(C)C[C@@H](C[N@@]1CCC[N@]2[C@H]1CCC2)N" TLX SMILES "OpenEye OEToolkits" 1.5.0 "CC(C)CC(CN1CCCN2C1CCC2)N" TLX InChI InChI 1.03 "InChI=1S/C13H27N3/c1-11(2)9-12(14)10-16-8-4-7-15-6-3-5-13(15)16/h11-13H,3-10,14H2,1-2H3/t12-,13+/m0/s1" TLX InChIKey InChI 1.03 SOQLOPQBSFMPNJ-QWHCGFSZSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier TLX "SYSTEMATIC NAME" ACDLabs 10.04 "(2S)-1-[(8aR)-hexahydropyrrolo[1,2-a]pyrimidin-1(2H)-yl]-4-methylpentan-2-amine" TLX "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-1-[(1S,5S,8aR)-3,4,6,7,8,8a-hexahydro-2H-pyrrolo[2,1-b]pyrimidin-1-yl]-4-methyl-pentan-2-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site TLX "Create component" 1999-07-08 RCSB TLX "Modify descriptor" 2011-06-04 RCSB TLX "Modify backbone" 2023-11-03 PDBE TLX "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id TLX _pdbx_chem_comp_pcm.modified_residue_id ? _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Non-standard residue" _pdbx_chem_comp_pcm.position "Amino-acid side chain and backbone" _pdbx_chem_comp_pcm.polypeptide_position C-terminal _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #