data_TR6 # _chem_comp.id TR6 _chem_comp.name Trovafloxacin _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H15 F3 N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "7-[(1R,5S,6s)-6-amino-3-azabicyclo[3.1.0]hex-3-yl]-1-(2,4-difluorophenyl)-6-fluoro-4-oxo-1,4-dihydro-1,8-naphthyridine-3-carboxylic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-06-12 _chem_comp.pdbx_modified_date 2021-03-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 416.353 _chem_comp.one_letter_code ? _chem_comp.three_letter_code TR6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4KOE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal TR6 C01 C01 C 0 1 Y N N -89.296 -2.608 12.853 0.574 -2.371 -1.378 C01 TR6 1 TR6 C02 C02 C 0 1 Y N N -90.547 -2.853 13.400 -0.021 -3.617 -1.418 C02 TR6 2 TR6 C03 C03 C 0 1 Y N N -91.680 -2.346 12.798 -0.244 -4.318 -0.244 C03 TR6 3 TR6 F04 F04 F 0 1 N N N -92.863 -2.558 13.294 -0.825 -5.536 -0.286 F04 TR6 4 TR6 C05 C05 C 0 1 Y N N -91.561 -1.599 11.640 0.128 -3.771 0.973 C05 TR6 5 TR6 C06 C06 C 0 1 Y N N -90.318 -1.354 11.096 0.724 -2.524 1.018 C06 TR6 6 TR6 F07 F07 F 0 1 N N N -90.246 -0.622 9.972 1.088 -1.991 2.204 F07 TR6 7 TR6 C08 C08 C 0 1 Y N N -89.166 -1.853 11.705 0.954 -1.822 -0.161 C08 TR6 8 TR6 N09 N09 N 0 1 N N N -87.934 -1.619 11.190 1.557 -0.558 -0.119 N09 TR6 9 TR6 C10 C10 C 0 1 Y N N -87.267 -2.699 10.765 0.751 0.553 -0.004 C10 TR6 10 TR6 N11 N11 N 0 1 Y N N -87.846 -3.909 10.865 -0.568 0.420 0.066 N11 TR6 11 TR6 C12 C12 C 0 1 Y N N -87.217 -5.021 10.459 -1.365 1.469 0.178 C12 TR6 12 TR6 N13 N13 N 0 1 N N N -87.897 -6.288 10.578 -2.735 1.275 0.248 N13 TR6 13 TR6 C14 C14 C 0 1 N N N -89.129 -6.016 11.285 -3.072 -0.170 0.179 C14 TR6 14 TR6 C15 C15 C 0 1 N N S -89.841 -7.333 11.316 -4.549 -0.204 -0.271 C15 TR6 15 TR6 C16 C16 C 0 1 N N R -90.146 -7.965 9.993 -5.514 0.811 0.344 C16 TR6 16 TR6 N17 N17 N 0 1 N N N -91.226 -8.990 9.896 -6.951 0.516 0.274 N17 TR6 17 TR6 C18 C18 C 0 1 N N R -88.924 -8.370 10.748 -4.775 1.135 -1.003 C18 TR6 18 TR6 C19 C19 C 0 1 N N N -87.643 -7.699 10.375 -3.417 1.865 -0.933 C19 TR6 19 TR6 C20 C20 C 0 1 Y N N -85.965 -4.948 9.908 -0.854 2.770 0.227 C20 TR6 20 TR6 C21 C21 C 0 1 Y N N -85.325 -3.711 9.789 0.500 2.963 0.159 C21 TR6 21 TR6 C22 C22 C 0 1 Y N N -85.987 -2.568 10.221 1.324 1.836 0.041 C22 TR6 22 TR6 C23 C23 C 0 1 N N N -85.399 -1.303 10.126 2.787 1.965 -0.037 C23 TR6 23 TR6 C24 C24 C 0 1 N N N -86.140 -0.215 10.591 3.566 0.722 -0.159 C24 TR6 24 TR6 C25 C25 C 0 1 N N N -87.413 -0.395 11.124 2.895 -0.483 -0.188 C25 TR6 25 TR6 C26 C26 C 0 1 N N N -85.610 1.175 10.539 5.033 0.763 -0.243 C26 TR6 26 TR6 O27 O27 O 0 1 N N N -86.376 2.118 10.852 5.677 1.947 -0.208 O27 TR6 27 TR6 O28 O28 O 0 1 N N N -84.432 1.356 10.180 5.666 -0.270 -0.344 O28 TR6 28 TR6 O29 O29 O 0 1 N N N -84.269 -1.193 9.652 3.331 3.056 -0.003 O29 TR6 29 TR6 F30 F30 F 0 1 N N N -85.387 -6.074 9.512 -1.689 3.826 0.341 F30 TR6 30 TR6 H011 H011 H 0 0 N N N -88.415 -3.012 13.330 0.747 -1.826 -2.294 H011 TR6 31 TR6 H021 H021 H 0 0 N N N -90.634 -3.443 14.300 -0.312 -4.046 -2.365 H021 TR6 32 TR6 H051 H051 H 0 0 N N N -92.445 -1.206 11.160 -0.047 -4.319 1.887 H051 TR6 33 TR6 H141 H141 H 0 0 N N N -88.922 -5.662 12.306 -2.440 -0.674 -0.552 H141 TR6 34 TR6 H142 H142 H 0 0 N N N -89.727 -5.263 10.750 -2.964 -0.633 1.160 H142 TR6 35 TR6 H151 H151 H 0 0 N N N -90.463 -7.586 12.187 -4.936 -1.145 -0.663 H151 TR6 36 TR6 H161 H161 H 0 0 N N N -89.986 -7.337 9.104 -5.188 1.344 1.237 H161 TR6 37 TR6 H171 H171 H 0 0 N N N -91.993 -8.618 9.373 -7.326 0.322 1.191 H171 TR6 38 TR6 H172 H172 H 0 0 N N N -90.872 -9.804 9.435 -7.454 1.270 -0.170 H172 TR6 39 TR6 H181 H181 H 0 0 N N N -88.890 -9.365 11.215 -5.348 1.199 -1.928 H181 TR6 40 TR6 H191 H191 H 0 0 N N N -87.391 -7.901 9.323 -3.567 2.935 -0.789 H191 TR6 41 TR6 H192 H192 H 0 0 N N N -86.822 -8.043 11.021 -2.839 1.680 -1.838 H192 TR6 42 TR6 H211 H211 H 0 0 N N N -84.333 -3.645 9.368 0.921 3.957 0.195 H211 TR6 43 TR6 H251 H251 H 0 0 N N N -87.976 0.454 11.483 3.465 -1.396 -0.277 H251 TR6 44 TR6 H2 H2 H 0 1 N N N -85.914 2.944 10.768 6.642 1.924 -0.267 H2 TR6 45 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal TR6 F30 C20 SING N N 1 TR6 O29 C23 DOUB N N 2 TR6 C21 C20 DOUB Y N 3 TR6 C21 C22 SING Y N 4 TR6 N17 C16 SING N N 5 TR6 C20 C12 SING Y N 6 TR6 F07 C06 SING N N 7 TR6 C16 C18 SING N N 8 TR6 C16 C15 SING N N 9 TR6 C23 C22 SING N N 10 TR6 C23 C24 SING N N 11 TR6 O28 C26 DOUB N N 12 TR6 C22 C10 DOUB Y N 13 TR6 C19 N13 SING N N 14 TR6 C19 C18 SING N N 15 TR6 C12 N13 SING N N 16 TR6 C12 N11 DOUB Y N 17 TR6 C26 C24 SING N N 18 TR6 C26 O27 SING N N 19 TR6 N13 C14 SING N N 20 TR6 C24 C25 DOUB N N 21 TR6 C18 C15 SING N N 22 TR6 C10 N11 SING Y N 23 TR6 C10 N09 SING N N 24 TR6 C06 C05 DOUB Y N 25 TR6 C06 C08 SING Y N 26 TR6 C25 N09 SING N N 27 TR6 N09 C08 SING N N 28 TR6 C14 C15 SING N N 29 TR6 C05 C03 SING Y N 30 TR6 C08 C01 DOUB Y N 31 TR6 C03 F04 SING N N 32 TR6 C03 C02 DOUB Y N 33 TR6 C01 C02 SING Y N 34 TR6 C01 H011 SING N N 35 TR6 C02 H021 SING N N 36 TR6 C05 H051 SING N N 37 TR6 C14 H141 SING N N 38 TR6 C14 H142 SING N N 39 TR6 C15 H151 SING N N 40 TR6 C16 H161 SING N N 41 TR6 N17 H171 SING N N 42 TR6 N17 H172 SING N N 43 TR6 C18 H181 SING N N 44 TR6 C19 H191 SING N N 45 TR6 C19 H192 SING N N 46 TR6 C21 H211 SING N N 47 TR6 C25 H251 SING N N 48 TR6 O27 H2 SING N N 49 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor TR6 SMILES ACDLabs 12.01 "O=C(O)C=5C(=O)c1c(nc(c(F)c1)N3CC2C(N)C2C3)N(c4ccc(F)cc4F)C=5" TR6 InChI InChI 1.03 "InChI=1S/C20H15F3N4O3/c21-8-1-2-15(13(22)3-8)27-7-12(20(29)30)17(28)9-4-14(23)19(25-18(9)27)26-5-10-11(6-26)16(10)24/h1-4,7,10-11,16H,5-6,24H2,(H,29,30)/t10-,11+,16+" TR6 InChIKey InChI 1.03 WVPSKSLAZQPAKQ-CDMJZVDBSA-N TR6 SMILES_CANONICAL CACTVS 3.370 "N[C@H]1[C@@H]2CN(C[C@H]12)c3nc4N(C=C(C(O)=O)C(=O)c4cc3F)c5ccc(F)cc5F" TR6 SMILES CACTVS 3.370 "N[CH]1[CH]2CN(C[CH]12)c3nc4N(C=C(C(O)=O)C(=O)c4cc3F)c5ccc(F)cc5F" TR6 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1cc(c(cc1F)F)N2C=C(C(=O)c3c2nc(c(c3)F)N4C[C@@H]5[C@H](C4)C5N)C(=O)O" TR6 SMILES "OpenEye OEToolkits" 1.7.6 "c1cc(c(cc1F)F)N2C=C(C(=O)c3c2nc(c(c3)F)N4CC5C(C4)C5N)C(=O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier TR6 "SYSTEMATIC NAME" ACDLabs 12.01 "7-[(1R,5S,6s)-6-amino-3-azabicyclo[3.1.0]hex-3-yl]-1-(2,4-difluorophenyl)-6-fluoro-4-oxo-1,4-dihydro-1,8-naphthyridine-3-carboxylic acid" TR6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "7-[(1S,5R)-6-azanyl-3-azabicyclo[3.1.0]hexan-3-yl]-1-[2,4-bis(fluoranyl)phenyl]-6-fluoranyl-4-oxidanylidene-1,8-naphthyridine-3-carboxylic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site TR6 "Create component" 2013-06-12 RCSB TR6 "Initial release" 2014-11-26 RCSB TR6 "Modify synonyms" 2021-03-13 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id TR6 _pdbx_chem_comp_synonyms.name "7-[(1R,5S,6s)-6-amino-3-azabicyclo[3.1.0]hex-3-yl]-1-(2,4-difluorophenyl)-6-fluoro-4-oxo-1,4-dihydro-1,8-naphthyridine-3-carboxylic acid" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? ##