data_TS9 # _chem_comp.id TS9 _chem_comp.name "(2S,3S,4R)-2-amino-3,4-dihydroxy-3-methylpentanoic acid" _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C6 H13 N O4" _chem_comp.mon_nstd_parent_comp_id ILE _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2008-03-11 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 163.172 _chem_comp.one_letter_code I _chem_comp.three_letter_code TS9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3CF5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal TS9 N N N 0 1 N N N Y Y N 127.225 84.033 112.494 0.552 1.933 0.143 N TS9 1 TS9 CA CA C 0 1 N N S Y N N 127.812 85.106 113.318 0.583 0.512 0.516 CA TS9 2 TS9 C C C 0 1 N N N Y N Y 128.343 84.492 114.606 1.931 -0.068 0.176 C TS9 3 TS9 CB CB C 0 1 N N S N N N 126.771 86.225 113.607 -0.505 -0.241 -0.253 CB TS9 4 TS9 OG3 OG3 O 0 1 N N N N N N 125.569 85.641 114.081 -0.208 -0.210 -1.650 OG3 TS9 5 TS9 CG2 CG2 C 0 1 N N N N N N 127.328 87.193 114.602 -0.556 -1.693 0.226 CG2 TS9 6 TS9 CG1 CG1 C 0 1 N N R N N N 126.400 86.919 112.266 -1.859 0.427 -0.004 CG1 TS9 7 TS9 OD2 OD2 O 0 1 N N N N N N 127.638 87.431 111.720 -2.103 0.501 1.402 OD2 TS9 8 TS9 CD1 CD1 C 0 1 N N N N N N 125.345 88.024 112.379 -2.963 -0.397 -0.671 CD1 TS9 9 TS9 OXT OXT O 0 1 N Y N Y N Y 130.075 84.353 114.819 2.344 -1.200 0.767 OXT TS9 10 TS9 O O O 0 1 N Y N Y N Y 127.643 83.942 115.524 2.641 0.486 -0.630 O TS9 11 TS9 H HN1 H 0 1 N N N Y Y N 126.871 84.421 111.643 1.218 2.463 0.685 H TS9 12 TS9 H2 HN2 H 0 1 N Y N Y Y N 127.927 83.353 112.283 0.715 2.050 -0.845 H2 TS9 13 TS9 HA HA H 0 1 N N N Y N N 128.641 85.581 112.772 0.405 0.414 1.587 HA TS9 14 TS9 HXT HXT H 0 1 N Y N Y N Y 130.259 83.870 115.616 3.216 -1.534 0.516 HXT TS9 15 TS9 HG3 HG3 H 0 1 N N N N N N 124.933 86.324 114.258 -0.160 0.681 -2.023 HG3 TS9 16 TS9 HG21 HG21 H 0 0 N N N N N N 126.587 87.981 114.802 -0.783 -1.716 1.292 HG21 TS9 17 TS9 HG22 HG22 H 0 0 N N N N N N 127.561 86.664 115.538 -1.331 -2.229 -0.321 HG22 TS9 18 TS9 HG23 HG23 H 0 0 N N N N N N 128.246 87.646 114.199 0.408 -2.168 0.049 HG23 TS9 19 TS9 HG1 HG1 H 0 1 N N N N N N 125.922 86.178 111.608 -1.852 1.432 -0.425 HG1 TS9 20 TS9 HD2 HD2 H 0 1 N N N N N N 127.464 87.867 110.894 -2.124 -0.359 1.843 HD2 TS9 21 TS9 HD11 HD11 H 0 0 N N N N N N 125.152 88.451 111.384 -2.971 -1.402 -0.250 HD11 TS9 22 TS9 HD12 HD12 H 0 0 N N N N N N 124.413 87.601 112.783 -3.928 0.078 -0.494 HD12 TS9 23 TS9 HD13 HD13 H 0 0 N N N N N N 125.712 88.813 113.051 -2.777 -0.453 -1.743 HD13 TS9 24 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal TS9 N CA SING N N 1 TS9 CA C SING N N 2 TS9 CA CB SING N N 3 TS9 C OXT SING N N 4 TS9 C O DOUB N N 5 TS9 CB OG3 SING N N 6 TS9 CB CG2 SING N N 7 TS9 CB CG1 SING N N 8 TS9 CG1 OD2 SING N N 9 TS9 CG1 CD1 SING N N 10 TS9 N H SING N N 11 TS9 N H2 SING N N 12 TS9 CA HA SING N N 13 TS9 OXT HXT SING N N 14 TS9 OG3 HG3 SING N N 15 TS9 CG2 HG21 SING N N 16 TS9 CG2 HG22 SING N N 17 TS9 CG2 HG23 SING N N 18 TS9 CG1 HG1 SING N N 19 TS9 OD2 HD2 SING N N 20 TS9 CD1 HD11 SING N N 21 TS9 CD1 HD12 SING N N 22 TS9 CD1 HD13 SING N N 23 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor TS9 SMILES ACDLabs 12.01 "O=C(O)C(N)C(O)(C)C(O)C" TS9 SMILES_CANONICAL CACTVS 3.370 "C[C@@H](O)[C@@](C)(O)[C@H](N)C(O)=O" TS9 SMILES CACTVS 3.370 "C[CH](O)[C](C)(O)[CH](N)C(O)=O" TS9 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "C[C@H]([C@](C)([C@@H](C(=O)O)N)O)O" TS9 SMILES "OpenEye OEToolkits" 1.7.0 "CC(C(C)(C(C(=O)O)N)O)O" TS9 InChI InChI 1.03 "InChI=1S/C6H13NO4/c1-3(8)6(2,11)4(7)5(9)10/h3-4,8,11H,7H2,1-2H3,(H,9,10)/t3-,4-,6-/m1/s1" TS9 InChIKey InChI 1.03 QYQDTSNOBSCUAW-ZMIZWQJLSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier TS9 "SYSTEMATIC NAME" ACDLabs 12.01 "(2S,3S,4R)-2-amino-3,4-dihydroxy-3-methylpentanoic acid (non-preferred name)" TS9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2S,3S,4R)-2-azanyl-3,4-dihydroxy-3-methyl-pentanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site TS9 "Create component" 2008-03-11 EBI TS9 "Modify atom id" 2011-01-11 RCSB TS9 "Modify descriptor" 2011-06-04 RCSB TS9 "Other modification" 2019-04-17 PDBE TS9 "Modify backbone" 2023-11-03 PDBE #