data_U0D # _chem_comp.id U0D _chem_comp.name "4-(1-{1-[2-(dimethylamino)ethyl]piperidin-4-yl}-4-[4-(trifluoromethyl)phenyl]-1H-imidazol-5-yl)-N-(3,5-dimethylphenyl)pyrimidin-2-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H36 F3 N7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-04-07 _chem_comp.pdbx_modified_date 2020-10-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 563.660 _chem_comp.one_letter_code ? _chem_comp.three_letter_code U0D _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6WGX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal U0D N1 N1 N 0 1 Y N N -0.833 -11.184 -20.508 -2.066 -1.770 -0.097 N1 U0D 1 U0D N3 N2 N 0 1 Y N N -1.636 -6.430 -21.167 0.900 2.352 -0.784 N3 U0D 2 U0D C4 C1 C 0 1 Y N N 2.207 -9.746 -15.738 3.411 -3.837 0.920 C4 U0D 3 U0D C5 C2 C 0 1 Y N N 1.434 -10.386 -16.714 2.038 -3.699 0.907 C5 U0D 4 U0D C6 C3 C 0 1 Y N N 1.138 -9.803 -17.942 1.442 -2.770 0.054 C6 U0D 5 U0D C7 C4 C 0 1 Y N N 0.413 -10.477 -18.872 -0.032 -2.616 0.035 C7 U0D 6 U0D C8 C5 C 0 1 Y N N -0.386 -10.089 -19.895 -0.731 -1.437 -0.158 C8 U0D 7 U0D C10 C6 C 0 1 N N N -1.736 -11.322 -21.692 -3.197 -0.851 -0.250 C10 U0D 8 U0D C13 C7 C 0 1 Y N N -1.387 -6.620 -19.830 -0.284 2.100 -1.321 C13 U0D 9 U0D C15 C8 C 0 1 N N N -1.525 -12.671 -22.340 -3.964 -1.192 -1.531 C15 U0D 10 U0D C17 C9 C 0 1 N N N -4.041 -11.347 -22.581 -5.346 -0.074 0.756 C17 U0D 11 U0D C20 C10 C 0 1 Y N N -2.668 -8.386 -25.074 2.417 4.127 0.395 C20 U0D 12 U0D C21 C11 C 0 1 Y N N -2.591 -9.347 -26.060 2.920 5.410 0.300 C21 U0D 13 U0D C22 C12 C 0 1 Y N N -1.444 -10.076 -26.234 4.282 5.613 0.177 C22 U0D 14 U0D C24 C13 C 0 1 Y N N -0.434 -8.866 -24.439 4.649 3.247 0.237 C24 U0D 15 U0D C26 C14 C 0 1 N N N -6.144 -12.974 -23.851 -8.268 -0.068 0.478 C26 U0D 16 U0D C28 C15 C 0 1 N N N -7.031 -14.271 -22.023 -10.558 0.184 1.223 C28 U0D 17 U0D C1 C16 C 0 1 Y N N 1.694 -8.559 -18.159 2.238 -1.986 -0.780 C1 U0D 18 U0D C11 C17 C 0 1 Y N N -0.779 -8.877 -20.295 -0.161 -0.096 -0.383 C11 U0D 19 U0D C12 C18 C 0 1 Y N N -0.966 -7.855 -19.395 -0.859 0.857 -1.137 C12 U0D 20 U0D C14 C19 C 0 1 Y N N -1.451 -7.440 -22.020 1.540 1.433 -0.075 C14 U0D 21 U0D C16 C20 C 0 1 N N N -2.442 -12.827 -23.523 -5.178 -0.269 -1.654 C16 U0D 22 U0D C18 C21 C 0 1 N N N -3.182 -11.145 -21.343 -4.136 -0.991 0.951 C18 U0D 23 U0D C19 C22 C 0 1 Y N N -1.595 -8.143 -24.242 3.282 3.040 0.366 C19 U0D 24 U0D C2 C23 C 0 1 Y N N 2.465 -7.923 -17.188 3.610 -2.134 -0.758 C2 U0D 25 U0D C23 C24 C 0 1 Y N N -0.358 -9.840 -25.422 5.146 4.532 0.148 C23 U0D 26 U0D C25 C25 C 0 1 N N N -4.689 -12.885 -24.284 -7.290 0.326 -0.630 C25 U0D 27 U0D C27 C26 C 0 1 N N N -5.420 -15.293 -23.495 -9.278 2.131 0.562 C27 U0D 28 U0D C29 C27 C 0 1 N N N 3.549 -7.786 -14.997 5.695 -3.208 0.114 C29 U0D 29 U0D C3 C28 C 0 1 Y N N 2.738 -8.485 -15.961 4.196 -3.053 0.094 C3 U0D 30 U0D C30 C29 C 0 1 N N N -3.675 -9.593 -26.881 1.983 6.589 0.331 C30 U0D 31 U0D C31 C30 C 0 1 N N N 0.795 -10.577 -25.609 6.630 4.759 0.013 C31 U0D 32 U0D C9 C31 C 0 1 Y N N -0.301 -12.225 -19.898 -2.140 -3.098 0.123 C9 U0D 33 U0D F1 F1 F 0 1 N N N 3.353 -6.664 -15.019 6.022 -4.525 0.453 F1 U0D 34 U0D F2 F2 F 0 1 N N N 4.685 -7.944 -15.272 6.211 -2.911 -1.151 F2 U0D 35 U0D F3 F3 F 0 1 N N N 3.387 -8.215 -13.902 6.242 -2.334 1.059 F3 U0D 36 U0D N2 N3 N 0 1 Y N N 0.456 -11.799 -18.904 -0.937 -3.596 0.201 N2 U0D 37 U0D N4 N4 N 0 1 Y N N -1.039 -8.630 -21.580 1.028 0.230 0.127 N4 U0D 38 U0D N5 N5 N 0 1 N N N -3.819 -12.677 -23.122 -6.046 -0.441 -0.482 N5 U0D 39 U0D N6 N6 N 0 1 N N N -1.700 -7.193 -23.311 2.777 1.740 0.468 N6 U0D 40 U0D N7 N7 N 0 1 N N N -6.503 -14.321 -23.386 -9.512 0.699 0.330 N7 U0D 41 U0D H1 H1 H 0 1 N N N 2.393 -10.242 -14.797 3.874 -4.555 1.580 H1 U0D 42 U0D H2 H2 H 0 1 N N N 1.051 -11.374 -16.505 1.426 -4.309 1.555 H2 U0D 43 U0D H3 H3 H 0 1 N N N -1.463 -10.547 -22.424 -2.829 0.174 -0.307 H3 U0D 44 U0D H4 H4 H 0 1 N N N -1.520 -5.810 -19.129 -0.795 2.858 -1.896 H4 U0D 45 U0D H5 H5 H 0 1 N N N -1.738 -13.464 -21.608 -3.312 -1.053 -2.393 H5 U0D 46 U0D H6 H6 H 0 1 N N N -0.481 -12.754 -22.676 -4.297 -2.229 -1.490 H6 U0D 47 U0D H7 H7 H 0 1 N N N -3.773 -10.595 -23.338 -6.024 -0.182 1.602 H7 U0D 48 U0D H8 H8 H 0 1 N N N -5.102 -11.234 -22.312 -5.010 0.961 0.689 H8 U0D 49 U0D H9 H9 H 0 1 N N N -3.578 -7.818 -24.952 1.354 3.969 0.495 H9 U0D 50 U0D H10 H10 H 0 1 N N N -1.392 -10.832 -27.004 4.673 6.617 0.102 H10 U0D 51 U0D H11 H11 H 0 1 N N N 0.427 -8.669 -23.818 5.324 2.404 0.214 H11 U0D 52 U0D H12 H12 H 0 1 N N N -6.314 -12.259 -23.032 -8.487 -1.134 0.407 H12 U0D 53 U0D H13 H13 H 0 1 N N N -6.785 -12.712 -24.706 -7.822 0.147 1.449 H13 U0D 54 U0D H14 H14 H 0 1 N N N -7.294 -15.287 -21.693 -10.222 0.260 2.258 H14 U0D 55 U0D H15 H15 H 0 1 N N N -6.268 -13.853 -21.350 -11.468 0.770 1.093 H15 U0D 56 U0D H16 H16 H 0 1 N N N -7.928 -13.635 -22.001 -10.760 -0.860 0.983 H16 U0D 57 U0D H17 H17 H 0 1 N N N 1.527 -8.066 -19.105 1.782 -1.265 -1.443 H17 U0D 58 U0D H18 H18 H 0 1 N N N -0.782 -8.022 -18.344 -1.824 0.625 -1.564 H18 U0D 59 U0D H19 H19 H 0 1 N N N -2.300 -13.826 -23.961 -4.843 0.766 -1.709 H19 U0D 60 U0D H20 H20 H 0 1 N N N -2.198 -12.060 -24.273 -5.734 -0.519 -2.557 H20 U0D 61 U0D H21 H21 H 0 1 N N N -3.341 -10.130 -20.950 -4.473 -2.025 1.031 H21 U0D 62 U0D H22 H22 H 0 1 N N N -3.466 -11.883 -20.578 -3.608 -0.708 1.861 H22 U0D 63 U0D H23 H23 H 0 1 N N N 2.867 -6.945 -17.408 4.228 -1.527 -1.404 H23 U0D 64 U0D H24 H24 H 0 1 N N N -4.403 -13.820 -24.787 -7.736 0.111 -1.601 H24 U0D 65 U0D H25 H25 H 0 1 N N N -4.570 -12.042 -24.981 -7.070 1.391 -0.559 H25 U0D 66 U0D H26 H26 H 0 1 N N N -5.766 -16.271 -23.129 -8.550 2.502 -0.159 H26 U0D 67 U0D H27 H27 H 0 1 N N N -5.113 -15.383 -24.547 -10.215 2.675 0.446 H27 U0D 68 U0D H28 H28 H 0 1 N N N -4.564 -14.958 -22.891 -8.896 2.277 1.572 H28 U0D 69 U0D H29 H29 H 0 1 N N N -4.309 -10.369 -26.429 1.844 6.916 1.362 H29 U0D 70 U0D H30 H30 H 0 1 N N N -4.259 -8.669 -27.004 2.407 7.405 -0.254 H30 U0D 71 U0D H31 H31 H 0 1 N N N -3.320 -9.936 -27.864 1.021 6.300 -0.092 H31 U0D 72 U0D H32 H32 H 0 1 N N N 1.446 -10.063 -26.331 7.074 4.855 1.004 H32 U0D 73 U0D H33 H33 H 0 1 N N N 1.323 -10.682 -24.650 7.080 3.913 -0.506 H33 U0D 74 U0D H34 H34 H 0 1 N N N 0.534 -11.574 -25.995 6.808 5.671 -0.555 H34 U0D 75 U0D H35 H35 H 0 1 N N N -0.459 -13.259 -20.168 -3.056 -3.663 0.221 H35 U0D 76 U0D H37 H37 H 0 1 N N N -1.972 -6.271 -23.586 3.292 1.053 0.919 H37 U0D 77 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal U0D C30 C21 SING N N 1 U0D C22 C21 DOUB Y N 2 U0D C22 C23 SING Y N 3 U0D C21 C20 SING Y N 4 U0D C31 C23 SING N N 5 U0D C23 C24 DOUB Y N 6 U0D C20 C19 DOUB Y N 7 U0D C24 C19 SING Y N 8 U0D C25 C26 SING N N 9 U0D C25 N5 SING N N 10 U0D C19 N6 SING N N 11 U0D C26 N7 SING N N 12 U0D C16 N5 SING N N 13 U0D C16 C15 SING N N 14 U0D C27 N7 SING N N 15 U0D N7 C28 SING N N 16 U0D N6 C14 SING N N 17 U0D N5 C17 SING N N 18 U0D C17 C18 SING N N 19 U0D C15 C10 SING N N 20 U0D C14 N4 DOUB Y N 21 U0D C14 N3 SING Y N 22 U0D C10 C18 SING N N 23 U0D C10 N1 SING N N 24 U0D N4 C11 SING Y N 25 U0D N3 C13 DOUB Y N 26 U0D N1 C9 SING Y N 27 U0D N1 C8 SING Y N 28 U0D C11 C8 SING N N 29 U0D C11 C12 DOUB Y N 30 U0D C9 N2 DOUB Y N 31 U0D C8 C7 DOUB Y N 32 U0D C13 C12 SING Y N 33 U0D N2 C7 SING Y N 34 U0D C7 C6 SING N N 35 U0D C1 C6 DOUB Y N 36 U0D C1 C2 SING Y N 37 U0D C6 C5 SING Y N 38 U0D C2 C3 DOUB Y N 39 U0D C5 C4 DOUB Y N 40 U0D C3 C4 SING Y N 41 U0D C3 C29 SING N N 42 U0D F2 C29 SING N N 43 U0D F1 C29 SING N N 44 U0D C29 F3 SING N N 45 U0D C4 H1 SING N N 46 U0D C5 H2 SING N N 47 U0D C10 H3 SING N N 48 U0D C13 H4 SING N N 49 U0D C15 H5 SING N N 50 U0D C15 H6 SING N N 51 U0D C17 H7 SING N N 52 U0D C17 H8 SING N N 53 U0D C20 H9 SING N N 54 U0D C22 H10 SING N N 55 U0D C24 H11 SING N N 56 U0D C26 H12 SING N N 57 U0D C26 H13 SING N N 58 U0D C28 H14 SING N N 59 U0D C28 H15 SING N N 60 U0D C28 H16 SING N N 61 U0D C1 H17 SING N N 62 U0D C12 H18 SING N N 63 U0D C16 H19 SING N N 64 U0D C16 H20 SING N N 65 U0D C18 H21 SING N N 66 U0D C18 H22 SING N N 67 U0D C2 H23 SING N N 68 U0D C25 H24 SING N N 69 U0D C25 H25 SING N N 70 U0D C27 H26 SING N N 71 U0D C27 H27 SING N N 72 U0D C27 H28 SING N N 73 U0D C30 H29 SING N N 74 U0D C30 H30 SING N N 75 U0D C30 H31 SING N N 76 U0D C31 H32 SING N N 77 U0D C31 H33 SING N N 78 U0D C31 H34 SING N N 79 U0D C9 H35 SING N N 80 U0D N6 H37 SING N N 81 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor U0D SMILES ACDLabs 12.01 "n2(cnc(c1ccc(cc1)C(F)(F)F)c2c3ccnc(n3)Nc4cc(cc(c4)C)C)C5CCN(CC5)CCN(C)C" U0D InChI InChI 1.03 "InChI=1S/C31H36F3N7/c1-21-17-22(2)19-25(18-21)37-30-35-12-9-27(38-30)29-28(23-5-7-24(8-6-23)31(32,33)34)36-20-41(29)26-10-13-40(14-11-26)16-15-39(3)4/h5-9,12,17-20,26H,10-11,13-16H2,1-4H3,(H,35,37,38)" U0D InChIKey InChI 1.03 XTJARSYKQDZEOI-UHFFFAOYSA-N U0D SMILES_CANONICAL CACTVS 3.385 "CN(C)CCN1CCC(CC1)n2cnc(c3ccc(cc3)C(F)(F)F)c2c4ccnc(Nc5cc(C)cc(C)c5)n4" U0D SMILES CACTVS 3.385 "CN(C)CCN1CCC(CC1)n2cnc(c3ccc(cc3)C(F)(F)F)c2c4ccnc(Nc5cc(C)cc(C)c5)n4" U0D SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(cc(c1)Nc2nccc(n2)c3c(ncn3C4CCN(CC4)CCN(C)C)c5ccc(cc5)C(F)(F)F)C" U0D SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cc(cc(c1)Nc2nccc(n2)c3c(ncn3C4CCN(CC4)CCN(C)C)c5ccc(cc5)C(F)(F)F)C" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier U0D "SYSTEMATIC NAME" ACDLabs 12.01 "4-(1-{1-[2-(dimethylamino)ethyl]piperidin-4-yl}-4-[4-(trifluoromethyl)phenyl]-1H-imidazol-5-yl)-N-(3,5-dimethylphenyl)pyrimidin-2-amine" U0D "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-[3-[1-[2-(dimethylamino)ethyl]piperidin-4-yl]-5-[4-(trifluoromethyl)phenyl]imidazol-4-yl]-~{N}-(3,5-dimethylphenyl)pyrimidin-2-amine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site U0D "Create component" 2020-04-07 RCSB U0D "Initial release" 2020-10-07 RCSB ##