data_U5C # _chem_comp.id U5C _chem_comp.name "2,2-bis(oxidanyl)pentanedioic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C5 H8 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "2,2-dihydroxyglutarate; 2,2-dihydroxypentanedioic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-05-03 _chem_comp.pdbx_modified_date 2023-08-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 164.113 _chem_comp.one_letter_code ? _chem_comp.three_letter_code U5C _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8OWM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal U5C C07 C1 C 0 1 N N N 9.638 34.023 74.434 0.241 0.321 -0.104 C07 U5C 1 U5C C08 C2 C 0 1 N N N 8.457 33.081 74.228 -1.044 -0.479 0.120 C08 U5C 2 U5C C09 C3 C 0 1 N N N 10.482 33.918 73.213 1.452 -0.583 0.137 C09 U5C 3 U5C C10 C4 C 0 1 N N N 7.286 33.721 74.947 -2.237 0.411 -0.117 C10 U5C 4 U5C C11 C5 C 0 1 N N N 11.654 34.857 73.315 2.718 0.205 -0.083 C11 U5C 5 U5C O01 O1 O 0 1 N N N 8.794 31.802 74.724 -1.084 -1.581 -0.789 O01 U5C 6 U5C O02 O2 O 0 1 N N N 8.033 32.965 72.884 -1.073 -0.967 1.463 O02 U5C 7 U5C O03 O3 O 0 1 N N N 7.414 34.859 75.467 -2.356 1.567 0.555 O03 U5C 8 U5C O04 O4 O 0 1 N N N 6.209 33.107 74.903 -3.085 0.085 -0.913 O04 U5C 9 U5C O05 O5 O 0 1 N N N 12.463 34.744 74.266 3.913 -0.388 0.073 O05 U5C 10 U5C O06 O6 O 0 1 N N N 11.849 35.614 72.361 2.658 1.369 -0.401 O06 U5C 11 U5C H1 H1 H 0 1 N N N 10.214 33.721 75.321 0.264 0.693 -1.128 H1 U5C 12 U5C H2 H2 H 0 1 N N N 9.282 35.056 74.562 0.272 1.161 0.589 H2 U5C 13 U5C H3 H3 H 0 1 N N N 9.880 34.181 72.331 1.430 -0.955 1.161 H3 U5C 14 U5C H4 H4 H 0 1 N N N 10.850 32.886 73.112 1.422 -1.424 -0.556 H4 U5C 15 U5C H5 H5 H 0 1 N N N 8.033 31.412 75.139 -1.066 -1.323 -1.721 H5 U5C 16 U5C H6 H6 H 0 1 N N N 7.084 32.950 72.851 -1.049 -0.272 2.134 H6 U5C 17 U5C H7 H7 H 0 1 N N N 6.575 35.150 75.804 -3.138 2.104 0.369 H7 U5C 18 U5C H8 H8 H 0 1 N N N 13.207 35.317 74.119 4.696 0.158 -0.080 H8 U5C 19 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal U5C O06 C11 DOUB N N 1 U5C O02 C08 SING N N 2 U5C C09 C11 SING N N 3 U5C C09 C07 SING N N 4 U5C C11 O05 SING N N 5 U5C C08 C07 SING N N 6 U5C C08 O01 SING N N 7 U5C C08 C10 SING N N 8 U5C O04 C10 DOUB N N 9 U5C C10 O03 SING N N 10 U5C C07 H1 SING N N 11 U5C C07 H2 SING N N 12 U5C C09 H3 SING N N 13 U5C C09 H4 SING N N 14 U5C O01 H5 SING N N 15 U5C O02 H6 SING N N 16 U5C O03 H7 SING N N 17 U5C O05 H8 SING N N 18 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor U5C InChI InChI 1.06 "InChI=1S/C5H8O6/c6-3(7)1-2-5(10,11)4(8)9/h10-11H,1-2H2,(H,6,7)(H,8,9)" U5C InChIKey InChI 1.06 FFGNAYMZNXXDAW-UHFFFAOYSA-N U5C SMILES_CANONICAL CACTVS 3.385 "OC(=O)CCC(O)(O)C(O)=O" U5C SMILES CACTVS 3.385 "OC(=O)CCC(O)(O)C(O)=O" U5C SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C(CC(C(=O)O)(O)O)C(=O)O" U5C SMILES "OpenEye OEToolkits" 2.0.7 "C(CC(C(=O)O)(O)O)C(=O)O" # _pdbx_chem_comp_identifier.comp_id U5C _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2,2-bis(oxidanyl)pentanedioic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site U5C "Create component" 2023-05-03 PDBE U5C "Initial release" 2023-08-09 RCSB # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 U5C 2,2-dihydroxyglutarate AUTHOR ? 2 U5C "2,2-dihydroxypentanedioic acid" AUTHOR ? #