data_UGU # _chem_comp.id UGU _chem_comp.name "(Z)-7-[(1R,2R,3R,5S)-3,5-bis(oxidanyl)-2-[(E,3S)-3-oxidanyloct-1-enyl]cyclopentyl]hept-5-enoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H34 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "Dinoprost; Prostaglandin F2a; PGF2alpha" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-05-30 _chem_comp.pdbx_modified_date 2023-11-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 354.481 _chem_comp.one_letter_code ? _chem_comp.three_letter_code UGU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8IUK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal UGU C2 C1 C 0 1 N N N N N N 116.382 96.321 76.205 3.876 -3.081 -0.029 C2 UGU 1 UGU C3 C2 C 0 1 N N N N N N 115.992 97.183 77.402 4.423 -1.706 0.361 C3 UGU 2 UGU C4 C3 C 0 1 N N N N N N 114.652 97.894 77.225 3.274 -0.816 0.837 C4 UGU 3 UGU C5 C4 C 0 1 N N N N N N 114.754 99.329 77.728 3.813 0.538 1.222 C5 UGU 4 UGU C6 C5 C 0 1 N N N N N N 114.020 99.776 78.724 3.283 1.622 0.713 C6 UGU 5 UGU C7 C6 C 0 1 N N N N N N 113.006 98.850 79.383 2.030 1.530 -0.119 C7 UGU 6 UGU C8 C7 C 0 1 N N R N N N 112.940 98.687 80.892 0.972 2.479 0.445 C8 UGU 7 UGU C9 C8 C 0 1 N N S N N N 112.063 97.323 81.261 1.425 3.939 0.269 C9 UGU 8 UGU O3 O1 O 0 1 N N N N N N 111.924 96.492 80.152 2.702 3.981 -0.370 O3 UGU 9 UGU C12 C9 C 0 1 N N R N N N 114.138 98.556 81.494 -0.347 2.329 -0.342 C12 UGU 10 UGU C11 C10 C 0 1 N N R N N N 113.743 97.734 82.798 -0.910 3.769 -0.419 C11 UGU 11 UGU O4 O2 O 0 1 N N N N N N 114.858 96.987 83.151 -1.793 3.909 -1.533 O4 UGU 12 UGU C10 C11 C 0 1 N N N N N N 112.620 96.711 82.336 0.366 4.625 -0.619 C10 UGU 13 UGU C13 C12 C 0 1 N N N N N N 114.432 99.922 82.053 -1.302 1.427 0.397 C13 UGU 14 UGU C14 C13 C 0 1 N N N N N N 113.416 100.476 82.649 -1.730 0.325 -0.166 C14 UGU 15 UGU C15 C14 C 0 1 N N S N N N 113.677 101.821 83.250 -2.686 -0.576 0.573 C15 UGU 16 UGU O5 O3 O 0 1 N N N N N N 114.270 101.455 84.473 -3.064 0.039 1.806 O5 UGU 17 UGU C16 C15 C 0 1 N N N N N N 114.717 102.610 82.461 -3.932 -0.810 -0.283 C16 UGU 18 UGU C17 C16 C 0 1 N N N N N N 115.278 103.781 83.264 -4.846 -1.822 0.411 C17 UGU 19 UGU C18 C17 C 0 1 N N N N N N 114.843 105.130 82.695 -6.092 -2.055 -0.445 C18 UGU 20 UGU C19 C18 C 0 1 N N N N N N 116.030 105.945 82.185 -7.006 -3.067 0.249 C19 UGU 21 UGU C20 C19 C 0 1 N N N N N N 115.692 106.780 80.950 -8.252 -3.301 -0.608 C20 UGU 22 UGU O1 O4 O 0 1 N N N N N N 118.568 95.478 75.586 6.137 -3.528 -0.519 O1 UGU 23 UGU C1 C20 C 0 1 N N N N N N 117.677 95.560 76.477 5.008 -3.958 -0.498 C1 UGU 24 UGU O2 O5 O 0 1 N N N N N N 117.856 95.024 77.602 4.762 -5.217 -0.894 O2 UGU 25 UGU H1 H1 H 0 1 N N N N N N 116.523 96.968 75.327 3.395 -3.539 0.835 H1 UGU 26 UGU H2 H2 H 0 1 N N N N N N 115.576 95.600 76.004 3.147 -2.967 -0.832 H2 UGU 27 UGU H3 H3 H 0 1 N N N N N N 115.930 96.538 78.291 5.152 -1.820 1.164 H3 UGU 28 UGU H4 H4 H 0 1 N N N N N N 116.773 97.943 77.554 4.904 -1.248 -0.503 H4 UGU 29 UGU H5 H5 H 0 1 N N N N N N 114.381 97.900 76.159 2.546 -0.702 0.035 H5 UGU 30 UGU H6 H6 H 0 1 N N N N N N 113.878 97.361 77.797 2.793 -1.274 1.702 H6 UGU 31 UGU H7 H7 H 0 1 N N N N N N 115.452 100.001 77.251 4.637 0.614 1.916 H7 UGU 32 UGU H8 H8 H 0 1 N N N N N N 114.136 100.792 79.072 3.744 2.583 0.891 H8 UGU 33 UGU H9 H9 H 0 1 N N N N N N 112.013 99.202 79.066 2.257 1.809 -1.148 H9 UGU 34 UGU H10 H10 H 0 1 N N N N N N 113.189 97.847 78.971 1.653 0.508 -0.095 H10 UGU 35 UGU H11 H11 H 0 1 N N N N N N 112.386 99.541 81.308 0.803 2.265 1.501 H11 UGU 36 UGU H12 H12 H 0 1 N N N N N N 111.065 97.690 81.542 1.475 4.434 1.239 H12 UGU 37 UGU H13 H13 H 0 1 N N N N N N 111.420 95.723 80.393 3.042 4.876 -0.510 H13 UGU 38 UGU H14 H14 H 0 1 N N N N N N 114.960 98.102 80.921 -0.152 1.939 -1.341 H14 UGU 39 UGU H15 H15 H 0 1 N N N N N N 113.372 98.401 83.590 -1.416 4.036 0.509 H15 UGU 40 UGU H16 H16 H 0 1 N N N N N N 114.665 96.478 83.929 -2.173 4.794 -1.625 H16 UGU 41 UGU H17 H17 H 0 1 N N N N N N 111.876 96.557 83.131 0.195 5.649 -0.287 H17 UGU 42 UGU H18 H18 H 0 1 N N N N N N 113.060 95.743 82.054 0.676 4.609 -1.664 H18 UGU 43 UGU H19 H19 H 0 1 N N N N N N 115.397 100.399 81.968 -1.634 1.691 1.390 H19 UGU 44 UGU H21 H21 H 0 1 N N N N N N 112.450 99.997 82.706 -1.398 0.061 -1.159 H21 UGU 45 UGU H23 H23 H 0 1 N N N N N N 112.749 102.398 83.375 -2.201 -1.531 0.776 H23 UGU 46 UGU H24 H24 H 0 1 N N N N N N 113.647 100.960 84.992 -3.502 0.894 1.701 H24 UGU 47 UGU H25 H25 H 0 1 N N N N N N 115.544 101.936 82.191 -4.466 0.132 -0.413 H25 UGU 48 UGU H26 H26 H 0 1 N N N N N N 114.248 103.000 81.546 -3.636 -1.196 -1.258 H26 UGU 49 UGU H27 H27 H 0 1 N N N N N N 114.922 103.702 84.302 -4.312 -2.764 0.540 H27 UGU 50 UGU H28 H28 H 0 1 N N N N N N 116.377 103.727 83.249 -5.142 -1.435 1.386 H28 UGU 51 UGU H29 H29 H 0 1 N N N N N N 114.333 105.701 83.485 -6.626 -1.113 -0.575 H29 UGU 52 UGU H30 H30 H 0 1 N N N N N N 114.147 104.956 81.861 -5.796 -2.442 -1.421 H30 UGU 53 UGU H31 H31 H 0 1 N N N N N N 116.846 105.254 81.928 -6.472 -4.009 0.378 H31 UGU 54 UGU H32 H32 H 0 1 N N N N N N 116.361 106.622 82.986 -7.302 -2.681 1.224 H32 UGU 55 UGU H33 H33 H 0 1 N N N N N N 116.583 107.342 80.632 -8.785 -2.359 -0.737 H33 UGU 56 UGU H34 H34 H 0 1 N N N N N N 115.367 106.115 80.136 -7.956 -3.687 -1.583 H34 UGU 57 UGU H35 H35 H 0 1 N N N N N N 114.882 107.484 81.194 -8.903 -4.022 -0.113 H35 UGU 58 UGU H36 H36 H 0 1 N N N N N N 118.706 94.600 77.620 5.520 -5.741 -1.186 H36 UGU 59 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal UGU O1 C1 DOUB N N 1 UGU C2 C1 SING N N 2 UGU C2 C3 SING N N 3 UGU C1 O2 SING N N 4 UGU C4 C3 SING N N 5 UGU C4 C5 SING N N 6 UGU C5 C6 DOUB N Z 7 UGU C6 C7 SING N N 8 UGU C7 C8 SING N N 9 UGU O3 C9 SING N N 10 UGU C8 C9 SING N N 11 UGU C8 C12 SING N N 12 UGU C20 C19 SING N N 13 UGU C9 C10 SING N N 14 UGU C12 C13 SING N N 15 UGU C12 C11 SING N N 16 UGU C13 C14 DOUB N E 17 UGU C19 C18 SING N N 18 UGU C10 C11 SING N N 19 UGU C16 C15 SING N N 20 UGU C16 C17 SING N N 21 UGU C14 C15 SING N N 22 UGU C18 C17 SING N N 23 UGU C11 O4 SING N N 24 UGU C15 O5 SING N N 25 UGU C2 H1 SING N N 26 UGU C2 H2 SING N N 27 UGU C3 H3 SING N N 28 UGU C3 H4 SING N N 29 UGU C4 H5 SING N N 30 UGU C4 H6 SING N N 31 UGU C5 H7 SING N N 32 UGU C6 H8 SING N N 33 UGU C7 H9 SING N N 34 UGU C7 H10 SING N N 35 UGU C8 H11 SING N N 36 UGU C9 H12 SING N N 37 UGU O3 H13 SING N N 38 UGU C12 H14 SING N N 39 UGU C11 H15 SING N N 40 UGU O4 H16 SING N N 41 UGU C10 H17 SING N N 42 UGU C10 H18 SING N N 43 UGU C13 H19 SING N N 44 UGU C14 H21 SING N N 45 UGU C15 H23 SING N N 46 UGU O5 H24 SING N N 47 UGU C16 H25 SING N N 48 UGU C16 H26 SING N N 49 UGU C17 H27 SING N N 50 UGU C17 H28 SING N N 51 UGU C18 H29 SING N N 52 UGU C18 H30 SING N N 53 UGU C19 H31 SING N N 54 UGU C19 H32 SING N N 55 UGU C20 H33 SING N N 56 UGU C20 H34 SING N N 57 UGU C20 H35 SING N N 58 UGU O2 H36 SING N N 59 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor UGU InChI InChI 1.06 "InChI=1S/C20H34O5/c1-2-3-6-9-15(21)12-13-17-16(18(22)14-19(17)23)10-7-4-5-8-11-20(24)25/h4,7,12-13,15-19,21-23H,2-3,5-6,8-11,14H2,1H3,(H,24,25)/b7-4-,13-12+/t15-,16+,17+,18-,19+/m0/s1" UGU InChIKey InChI 1.06 PXGPLTODNUVGFL-YNNPMVKQSA-N UGU SMILES_CANONICAL CACTVS 3.385 "CCCCC[C@H](O)/C=C/[C@H]1[C@H](O)C[C@H](O)[C@@H]1C\C=C/CCCC(O)=O" UGU SMILES CACTVS 3.385 "CCCCC[CH](O)C=C[CH]1[CH](O)C[CH](O)[CH]1CC=CCCCC(O)=O" UGU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCC[C@@H](/C=C/[C@H]1[C@@H](C[C@@H]([C@@H]1C/C=C\CCCC(=O)O)O)O)O" UGU SMILES "OpenEye OEToolkits" 2.0.7 "CCCCCC(C=CC1C(CC(C1CC=CCCCC(=O)O)O)O)O" # _pdbx_chem_comp_identifier.comp_id UGU _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(~{Z})-7-[(1~{R},2~{R},3~{R},5~{S})-3,5-bis(oxidanyl)-2-[(~{E},3~{S})-3-oxidanyloct-1-enyl]cyclopentyl]hept-5-enoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site UGU "Create component" 2023-05-30 PDBJ UGU "Initial release" 2023-07-12 RCSB UGU "Modify synonyms" 2023-11-01 PDBJ # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 UGU Dinoprost PUBCHEM ? 2 UGU "Prostaglandin F2a" PUBCHEM ? 3 UGU PGF2alpha PUBCHEM ? #